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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058941 ID=TCONS_00058941|Name=TCONS_00058941|organism=Clytia hemisphaerica|type=transcript|length=1475bp
ATAAGAtttttttcctcagatgtttaatttccaagcgccttcagaggttt
tcCGTGTGTGTAAGAAAATTATGGCCATCTGTTATTGGGTTAGGCTAGAC
TTTACCTCTTTTCTCTTTCCTATTCCAACAATATTTGATTGGCAATTGGA
TTGGTAATTTGGTATCTTTGTTTCGTCACAGTtacagtttttgttttttt
tcagtttgtATCTTTGCAAGACCCTAGGACTTTGAGAACGGTTGTTCGAT
TAGGACCTCTCATGGTATCCTGGTGCCCAAAAATATACGGAAAAACAGCT
TCCCTGACAGTTTTGTAGATCcacgtttttcattttcaatatattATAGT
CATATCAGAGAGAAAAGCCTTAGgtggaaaaatatttatttcacaCATTA
TGTTACACACATTATGCTATATATGCTATACCATAAAAAATTGCAGATGT
TTCTCAATGTCTCGAGGTTGCTTGGataaatgtcccaaagtgctttgAGA
TTTGATACTTAAAAAGTAGATATCGTAAGTAACttaaaattagagttttt
ttttatttgacctgCTAGTTCCAGACTTAATGAGCTTTAGTCATTATTCA
TATTTCAGGAAGTATGAAACGGGCGTTAAAATTATACAATAATTGGAAAA
TTTACTTATTGAAAGTCATCTTTGTTTTAAAAGCATAATTTTTATAAAGA
TCAGCagtatttcttaaaattttctcaaaaactccatatcaaaaacatcc
aaaaatgcCTAGTTTAAAGCCCTTTTTTATGTGTCTTTtacacttttttg
gaaaattagaATTTGGCTTTAAAGCTCATAAGTTTGGAACTATTGAATAG
CTCAGACTTTAAGTTGGGGTATctactttcaaaatattaaaacaagcACT
TTGATCTATTTGTTCAGCCTTGAGACATCAAGAAACATCCAATCTTTTTC
ATCAGCCACCAGGTAGGACCTGGAATTATTTACAGTGTAGAATAGGGACT
ATATTTTAGTTGGTTTTTAATATCTGGGTGAAGTTCTTGCTGGGTATCAT
AAAAACATGCCAGATCTTTTGCTTTCATCACAATCACAATTCAAAAAtag
taccgggtgcgccacaaaaaggtttctctctttaaagctAATTTTCTAGA
CAACTAAAACTTTTNCAGATCTTTTGCTTTCATCACAATCACAATTCAAA
AAtagtaccgggtgcgccacaaaaaggtttctctctttaaagctAATTTT
CTAGACATctaaatcttttaaaagaaccattccaaTTTCATTGGCAAGAA
agaagataaacttaaattttgatgtgtcatttattaaattcgattcatta
gatcaaaagttcaATTGAATATAAAAgatactttcagaaagtgctcgaaa
acgttgaaaatcgacctatcaaatttttattttaaattggcCATCGCAAT
AGCCTTTTACATGATAATAAGCGTT Run BLAST on NCBI transcript from alignment at scaffold_314:696035..697509 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058941 ID=TCONS_00058941|Name=TCONS_00058941|organism=Clytia hemisphaerica|type=transcript|length=1475bp|location=Sequence derived from alignment at scaffold_314:696035..697509 (Clytia hemisphaerica)
AACGCTTATTATCATGTAAAAGGCTATTGCGATGgccaatttaaaataaa
aatttgataggtcgattttcaacgttttcgagcactttctgaaagtatcT
TTTATATTCAATtgaacttttgatctaatgaatcgaatttaataaatgac
acatcaaaatttaagtttatcttctTTCTTGCCAATGAAAttggaatggt
tcttttaaaagatttagATGTCTAGAAAATTagctttaaagagagaaacc
tttttgtggcgcacccggtactaTTTTTGAATTGTGATTGTGATGAAAGC
AAAAGATCTGNAAAAGTTTTAGTTGTCTAGAAAATTagctttaaagagag
aaacctttttgtggcgcacccggtactaTTTTTGAATTGTGATTGTGATG
AAAGCAAAAGATCTGGCATGTTTTTATGATACCCAGCAAGAACTTCACCC
AGATATTAAAAACCAACTAAAATATAGTCCCTATTCTACACTGTAAATAA
TTCCAGGTCCTACCTGGTGGCTGATGAAAAAGATTGGATGTTTCTTGATG
TCTCAAGGCTGAACAAATAGATCAAAGTgcttgttttaatattttgaaag
tagATACCCCAACTTAAAGTCTGAGCTATTCAATAGTTCCAAACTTATGA
GCTTTAAAGCCAAATtctaattttccaaaaaagtgtaAAAGACACATAAA
AAAGGGCTTTAAACTAGgcatttttggatgtttttgatatggagtttttg
agaaaattttaagaaatactGCTGATCTTTATAAAAATTATGCTTTTAAA
ACAAAGATGACTTTCAATAAGTAAATTTTCCAATTATTGTATAATTTTAA
CGCCCGTTTCATACTTCCTGAAATATGAATAATGACTAAAGCTCATTAAG
TCTGGAACTAGcaggtcaaataaaaaaaaactctaattttaaGTTACTTA
CGATATCTACTTTTTAAGTATCAAATCTcaaagcactttgggacatttat
CCAAGCAACCTCGAGACATTGAGAAACATCTGCAATTTTTTATGGTATAG
CATATATAGCATAATGTGTGTAACATAATGtgtgaaataaatatttttcc
acCTAAGGCTTTTCTCTCTGATATGACTATaatatattgaaaatgaaaaa
cgtgGATCTACAAAACTGTCAGGGAAGCTGTTTTTCCGTATATTTTTGGG
CACCAGGATACCATGAGAGGTCCTAATCGAACAACCGTTCTCAAAGTCCT
AGGGTCTTGCAAAGATacaaactgaaaaaaaacaaaaactgtaACTGTGA
CGAAACAAAGATACCAAATTACCAATCCAATTGCCAATCAAATATTGTTG
GAATAGGAAAGAGAAAAGAGGTAAAGTCTAGCCTAACCCAATAACAGATG
GCCATAATTTTCTTACACACACGgaaaacctctgaaggcgcttggaaatt
aaacatctgaggaaaaaaaTCTTAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058941-exon-scaffold_314-1491911889:696035..697509 | TCONS_00058941-exon-scaffold_314-1491911889:696035..697509 | Clytia hemisphaerica | exon |
| TCONS_00058941-exon-scaffold_314-1510915933:696035..697509 | TCONS_00058941-exon-scaffold_314-1510915933:696035..697509 | Clytia hemisphaerica | exon |
| TCONS_00058941-exon-scaffold_314-1575043694:696035..697509 | TCONS_00058941-exon-scaffold_314-1575043694:696035..697509 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_314 | supercontig | scaffold_314:696035..697509 . |
Blast
The following BLAST results are available for this feature:
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