|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058752 ID=TCONS_00058752|Name=TCONS_00058752|organism=Clytia hemisphaerica|type=transcript|length=3413bp
CAACAAttataaaacaacaaaaaacaaacaaagaaaaaaaggaacGATGA
CCACATTACAGCTTGTGGGGATGACAACCTTTAAATAAACCTTCGAATCA
TAACGATAAGGaagtaacaaaaataaaatatcaaagaaattgaaCTCAAA
ATGACCACATTACAACTGGCAGACAAATTATGGATAGCTGACCTCCATGA
CTTAGATCAAGTAACTCGAAATCATCAATCCTTGATCTTCTTGAAAACGT
ATCACGAAACACTTTTTATACAGCAGAAAGTTGTATTCGCCAAATCTTAT
CGAAAGCGTTCACCCATGGTCACTGTTGAGATGTCAACCCAGGGCTATCA
ACCTTCATCCAAAGATCTTGCGCATGTCTTAAACATGCGCTCTTGTTACC
AATCACCCTTTACCATACTAGCTGGAAGCTATTGGGAAAacgaaatcaaa
aatcaagcaATCATTAAATTCTACGACACTTATCTATCGAAAGATCCAAT
TGTGATTGAACNTCATTAAATTCTACGACACTTATTTATCGAAAGATCCA
ATTGTGACTGAACATCAAGATTTTCATAATAAAGAACTAAATAATAACGA
CGCTAAAGATAGTTGGTCGTGGAAACAACCTTACAGTAATTTCCCTTTTC
TAATGTTTACAACAGAAGAGCCAAATCCACGTCAGATGTTTTTATCTCAC
CGTGAAGAAGTCGATTGTCTTGTTTCATGGACGGTCAATCAAAGCCATCA
CACTATCGGCAAAGCTTTCTTCTTTCCATATGGTGTACCAGATATGCTTG
GAGAAGCCGGTATAGCAGTCTTCCGGAACTCTTACACGAACAGTTTGATG
GGTCTATACATGTGTGAACGACTTCGCGACACATTGATAACTGAGGATTG
TAAAAAATATCGTACAGCTCAAGAAAAGAATGTCCCAGAAATGTTGATGT
TCAAGAAGTCAGCCAGTACTTTGCCCAATGGTGCTTGCTNCACAGCGCAA
GAAAAGAATGTCCCAGAAATGTTGATGTACAAGAAGTCAGCCAGTACTTT
GCCCAATGGTGCTTGCTTTTCCCAACGAGATAATCTCAAAGCACTACCAG
ATGACTGGGAAGACGACTTTGATGATTCGGAAGGTGATTTGACACCAACT
GATTCTGATGAGTTGTCTTCCGATGAATTCTTCGAAACTGATTCTGAAGA
CGAGGCGGAAAACTGCTCTCAAAATGATGGAATTGACTCGAATTTTGTTG
AATACGCAAGTAAAGGATACTACTCGCTCGTTCGCAAAgaaatttttcgc
ggaaaagTAGATATCAATATCTCAAATGAATCGACCGACTTTGAAGGAAA
ATGGGGAGATACTGCTCTCATCGCTGCTACACGAAATTGCCATTTCGATA
TCGTTATGGATTTGCTTCGTTCGAATGCAGATCCTACCCTTGAGATTTTT
TACAGTTCTGGTGATTCTGGCACTGCATTGAAAGTTGCTTCAGAATGCCT
ACAATTGCGTGAACTGGTGAAAGATGATATTTTACACCTGAAATATTCAG
AAGTGATTGAGCCCAGTGATCATGAAGCAGCTGCTTTAGATATTCTCTAC
AGAATCAAATGTTTCCAAGATATCATTGATGTATTGAGCATAGCTGAATC
GTTTTGGCCAAAGGCATCTTATTATTCCACTGATGTCTCGAACGAACGCA
AGGAAAAGTTGAAGAACTCTCCCAACAAACCAACCAATGAGAGAGAATTG
AAAGAAAAGCTTATTAAATTCGAACCCAGATCTCTTGATAAGAGCACCAT
CAAGCCATTGGCCGATGCGATCGTTCAAATCCGAAAGAAAGTTGAACGAG
AAACATCTCGGTTGTCTTTGTACATGAGGAATAACATGTGTGCATTGAAC
GCTTATTGTTCTGCAAGTCCGGCAACTGTGGATTGTCAACATGGTTGTTG
CGTCAGATGCTGCCCAGGACCTTGCAAAACACATGGTTTGAGAACCGAAC
AGCGCGTATTCGCGGCACAATATGGGAGTTCGAAAGTCATTTGTGTCAAG
CAAGATCTCATTCCGTACAACACAACCTTTCGAAGTCCCATGAATTccaa
ttttgatgtttttgccgTCAAAAACATGAATTGGGATGATGAAAAATCTG
AAGAATTCATTTTAAGCTCTGGCGAAGAAATTTGTGTCGTTCATAAGAAA
AGGATGTTTGACACACCCAAAAACAGTCCAGGTCTGAAAAAACCAAATTA
GAAATCTCGTTAAATCTGACATACGCTTATGGAGTTTTGATCGCTCAAAA
CAGCTCTTACAATTATGACTACGACAGTGAGGGTGACAGACCTGCTGGTA
TTTGTGGAAGGTTCCATAAATTGGTCGGATCGCCAACTACTGAAATCATC
AACAGGAAAATACGAGATTATCAACTCCAGAAATGCCAGGAGGATGCTAC
TGGGAAACCTATTCCAATCGAAGTGTTATCGGAGGGTTATACGTTCGCCA
TGGTAACTGAAGATCCTTCTCTTAAAGTTTTGGTGACTGATTCGGTATCT
TTCGGTGATTTTAAAGATGCTCAAAACAAACAGCCTCAAAAAGTCAGTGC
ATCTAGCAAAGCTAACGTCAACACAGTGCGTCACTTCAAACCAGGTCTTT
ACCATGTCAGTGCTGTCAAACCAGTGAAAGATTGTGATCCATTTGTGATG
TACCACCATGAGAGTATCGATCCACAGAAATTGATGGATCAGATTTTATT
GATGACTGATGATTACGGTGATCGTTCACCAGGTGTAGAGAATGTGATCG
ATGGTGAGGATTGGTGTGAATGGAGAAACTGGGATGGTTCTTTCAGCAGG
AGGGTTCAATTCGTTTCGAATGACCACGGTGAAGCGAGGAAAAACGAGGA
ATTAGCTGCTAGAAATATCATTTATTTTTGCCCTACAGAATCAGCTGGCT
TGTTGGAAAGAGCTGTAGAAGagagaaaaacaataaaatcaaaagtGTTT
AAAAAGATGGGAGGAGTTTTGGATGGAGATGCAAATGTCATTGCATTAGC
TGTTAAAACTGCTCGAATGAACTCCACTGGGAATTGGATTTACGGCAGGA
TCTTTCGAGATGAATTaagtggacaaaatttcgcccTGGTTGTCCATTTT
AATCACGGTTTGCATTTTGCACAAACCACTGACGAACTTAAGGAACAGTT
TCCTGGAAAGAAATTCACTTCAATCAAAGAAACGAATTTGAGATTCAATA
TTACCAACTTTGAAATATAAAAAGACTTTACTTTACTGGACAGATTTTAA
TAAAAACGAAAActcttaaaaacaaaacaaattaggacaggggggggcac
gcagttactacaagacagtatgacacttactaccgtggtgggtACTGTTT
CAAAAGATTTGAA Run BLAST on NCBI protein sequence of TCONS_00058752-protein >TCONS_00058752-protein ID=TCONS_00058752-protein|Name=TCONS_00058752-protein|organism=Clytia hemisphaerica|type=polypeptide|length=532bp
MFTTEEPNPRQMFLSHREEVDCLVSWTVNQSHHTIGKAFFFPYGVPDMLG
EAGIAVFRNSYTNSLMGLYMCERLRDTLITEDCKKYRTAQEKNVPEMLMF
KKSASTLPNGACXTAQEKNVPEMLMYKKSASTLPNGACFSQRDNLKALPD
DWEDDFDDSEGDLTPTDSDELSSDEFFETDSEDEAENCSQNDGIDSNFVE
YASKGYYSLVRKEIFRGKVDINISNESTDFEGKWGDTALIAATRNCHFDI
VMDLLRSNADPTLEIFYSSGDSGTALKVASECLQLRELVKDDILHLKYSE
VIEPSDHEAAALDILYRIKCFQDIIDVLSIAESFWPKASYYSTDVSNERK
EKLKNSPNKPTNERELKEKLIKFEPRSLDKSTIKPLADAIVQIRKKVERE
TSRLSLYMRNNMCALNAYCSASPATVDCQHGCCVRCCPGPCKTHGLRTEQ
RVFAAQYGSSKVICVKQDLIPYNTTFRSPMNSNFDVFAVKNMNWDDEKSE
EFILSSGEEICVVHKKRMFDTPKNSPGLKKPN Run BLAST on NCBI transcript from alignment at scaffold_313:458835..468585- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058752 ID=TCONS_00058752|Name=TCONS_00058752|organism=Clytia hemisphaerica|type=transcript|length=9751bp|location=Sequence derived from alignment at scaffold_313:458835..468585- (Clytia hemisphaerica)
CAACAATTATAAAACAACAAAAAACAAACAAAGAAAAAAAGGAACGATGA
CCACATTACAGCTTGTGGGGATGACAACCTTTAAATAAACCTTCGAATCA
TAACGATAAGGGTAAGAATAACTTATTGATGTCAAGTACAATCCGTCACT
TCTCTGATCAAATTCAAAATGATATCCCGTCTACTAGCAAAAGGTCTATG
TAGATGACATTATCCTCTATTAGGCGAGACCAATTTAATTTCTTGTTCTA
CGGGCCCGTCCGACCCTATTTTTGCTAAAATCAAAAAAATAATAATATTG
AATTTCCACTACATAATATTTTACACACTAGTTATTTGTAAAAATCAAAT
TTGAATAAAGCTGAAAATTAATTCAAGAAATGAAATGAAAAATTTATTCT
TATTTTACCGACCGACCGACCGACCGACCCATATTTTGCTAACGATCTGC
CCGTAGAACAACAAATTAAATTGGTCTCGCCTTAGTGATAGTAAAACGTG
GCAAAAAACCCTTAGAGTTTAGTAGAGCCCAAACCTTGCATGTCTGAATT
CCAGACCCAAAAATGTTTCTATGTGCAATCCTATTGCTGTTTTTAGCACT
CGTCAACCGTAATAAAGGAAACTAAGGAGGATGGGTAAGCTGAATTTTCA
AGTTAAAAGCGCATTTGTATATTTCAATACAAAGTAGATGATTCAGACGT
GCTAGTTGATTTTAAGTTCTGCATTCTCATGATAATTCACAATTATCAAT
TTCGATTCCTTCGAATCCCATTTTTACTCGCAAAGTTCACGTTACAAATT
TTCTGGTTGGCCAAGTAGAAAACGTCTAATTACGTTTTTACAAGAAAGAT
TAAATGTTCTTAATATCGTTGTTTTTTTCTATTTTCTTATTACATTATTG
GGCTCTTCCAGAAAAAAAATTGAATATGGGGGTGGATGATGTAACAATTT
TCAGTGACTTACCCCCCGGACAAAGTGACTTTTGGCCCCCCAGACAAGCA
TCAGTTGACCCCCGGACAACCCAAATTACCCCCGGACAGAGCAAATTTAC
CCCCCGGACAAGGAAAATTTTGTTGATTTTTCGCTACCACACGGACAATA
GTACGGACATTTTCTGGAAGAGCCCATTAGCCTTTAGATAGGTCCAGCTG
AATATTTTCTTTTTTTTATTCTCTTCCAAGAAAACGGATATTGTGAATCT
GAGGGTAGTGATTCTGACGAGTTTAGTTACGATTGCGATGACGGAGAAAA
TTATTCTGATGAAATCAATCCACCGGCAGTCGATTTTGCTTCCAAATGCA
TTCTCAAATTTTTCGATGGAGTAGAGAACAAACCAGGAATTGACTCTTTT
ATAAATGCTTCACGCAAATGGACAGAGATTGACCCGAGTGACGGCTATGA
TAGAATTCGGAATTGGCGTGATGATACCCCTCTAATAGCTGCTGTGCGAA
ATGGTCATTTTGAAGTCGTCCGTCGTTTATTAGTACTTGGTGCTGATCCA
ACACTTTGGTGTCGACATTATGACCAAAATGAATGGGCGTCTAGTATTGC
TTTAAGGCGTTTTGAATCTTTCAACGAAGAGAGAGACCGTTACCTTCAAG
GTGATTTTCCGCCGTTTAGTTCATTCAGGGGAGAAAAACTTGACCCAGAG
ATACTTGCTTTGGATAACCTATACAGAACTAACGAATTCCAGAATATCAT
CGTTGTTTTGAGAATAGCTGAGCAGTACTGGGAACGAGCTAGTTATTATC
CATTTGGTGATATAACCTGGGGACGCGATAAAGAATTGCTCAAATGTCCC
AATAAACCTTCTAATGAGACAGAAATGAGAAGAAAGTTGAATGGAGTTAT
TCGATCACTGCCCGATATGAGACGACTAGAGCCCCTTGCACAAGCCATTG
TTCAATTTAGGAAAAAGAAAGAGTCTGAACGTTTGTTGGCCATCAATTCT
TCTTTGCAACAGTTGTTATCAANTCATCTGGTGATATAACCTGGGGACGC
GATAAAGAATTGGTCAAATGTCCCAATAAACCTTCTAATGAGACAGAAAT
GAGAAGAAAGTTGAATAGAGTTATTCGATCACTGCCTGATATGAGACGAC
TAAAGCCCCTTGCACAAGCCATTGTTCAATTTAGGAAAAAGAAAGAGTCT
GAACGTTTGTTGGCCATCAATTCTTCTTTGCAACAGTTGTTATCAACGGA
TGAAGATAATACTTTGAGCTCAGATTATCCAGAAAATGGAGCAGCAGCGA
ACACCGGTAACTTTTTTCTCTTCTCTTAAGGGCTCTGACCATAGTGAATT
TCTGATATTTGCCACTTACAAAATGTTAAGTTCTACTTGATGTAGCCCAN
CGGTAGATGGTGTATATTTTATCGAACTAAAATTATTTTTAAAAGAACTT
CGAAACCAAAAGCTTAATTACCCATTAAAACTTAGCACTTTTTAAAAAAA
GAAGGTGGTACAACATATTATTAACGTCTTTTTAGTAAGTTCATAACGTC
ATTTTTGTAATTACATTCTTAATTACTCTTAAGGGATTTGATTAAAAAGC
AATTTGTAAAAGCAATTCTTTGTTAAAATTGTTAAAGAACCTAAAACATA
ACTTTTATGTTCAGATACTAAAATCAAATTTTGGACTATTGTCAGAGCCC
TTAAGGGACCATTCGCGTACGCTCTAACAGTNATTCGCGTACGCTCTAAC
AGTATCCCCCAGGTTCCCCCCTTTTTTTAATTTTTGCTGAATTTGAAATT
AGTATCTGACTTAAAATGTTGTATAATGTAAGTATAAAAAAACTTATTTG
AATCGTTTACACTATACTCTGATGCCATATAAAAGCATCCTTCATTCTAT
AATTGAAATTAAATTTTTATTTAACTTTTGCTGCTCTCAATCCTTTCAAT
CAACCAAAATTCATTAAAAACTAGAGTTAAACAAACTGTAACTTTTTTAG
TTGTGTTAAAATTTTTCTGTCCATAACGTTCATCATATAGGCTATGTTAC
AAAGACTCTAGGCGCGCCTAATACAATGAGTTTTATATTTAGTCTAGTTT
ATCAACTAGTTTTATGAATTTGATACATTTTGCCAATTTAGTTCAAGAAA
CTTAACTTACGGTGTCTTAGAATGAGAAGAACTTGTTTTCATTTTCAAGA
GTCTAAAGTGTGGTACATAATTCATGATATTCATGACGTAATGTTATCTA
CGGAAAGACCCGGTTTTTGCCAGTAGTGGCAAATTTTATATAACTTTTGT
CTAGTTTATATTTGCCACTACTGGCTAAAACCGGGGTCTTTCCGTAGATA
TTATTACGTCATGAATATCATGAATATAAGTGATTAATAAGAGGAATGTT
CTTTGAATAAAAACATCCACAGATTTTATTTAGCGTCCCTTGTATGCAGT
ATCCTATGCATATAACTTTTAGCATTTTTACGGATTGCCAATTTAGGGGG
GGGGGGGCCCCCTTTTTCAGAAAAAAAGGGATTTTCAAGTTTGTATTGAC
ACCAATTTAGGGGGTGGGTCCCCCCTTTTGTAGAAAATTAGGGTTTTCAA
GTTGGTATTGATACCAATTTGAGGGTGGTGGTGTCTACTACTTTCAAATC
TCGAAAAGTCTGGTTTTTGGACCCTGGGTTGGTATCCTAGACCCTGACCC
CCCTGTAATAGCTTGATATATGCATAACATTAGTAAGATGGGTTAAAATT
TTATAATATTTTGATTTTTCAAATAGAAAGTAAAAAAAAAACAGTTTGAA
AAAATTCGCGTACATAACATCTTCTTCGTACGACCTTTTGAATGGAAGTA
AAACTCTGTTATTCTTCCTTATAATATAAGGAAAGTTTCAAGTCTGACTT
TTCTGTTCCACAATCATGAAATTTCATAAAAATAGAAACTCCCTGCAAAA
TTTTAAACACCACAAATGATTTTTAAGTGTTCTAATTTAGTTCTAGAACG
TAGAGTTCTAGCTCTGGCTTTCTCAAGACTTAGGGTGCCTAAGGATCTCA
TAACCCAAAACCCCAAACTGTTCCATTAAGGCTGAGATACTTTAGGCGTA
CAAACTTTCGCGAGCAGAAACTTTCGCGAGGACGAAAAATCGCGAAATTC
ACGACATTTACTTTCGCGAATTTAACGGAAAAATATTTTTCGCGAGCATA
AACTTTCGCGAATCAAGACGTAAAATTGAGAATTTTCACATGAAAAAATG
GCTCAGAGATACAAATACTTCTTCGGTTGGCTTGACACATTTGTCCTTTG
ACTTATTAGTCTTTTAGCAGGCTAAAAAGTGCCATAAAAGTTACATTTTA
TTCAAAGTTTGAAGTTTTACAGATTTTCTATTTTTCANNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNATTTTTCGCGAGCATAAACTTTTGCGAATGG
CCCTTCCTAGAATTTTTAAAGATATTTACTTTCGCGAAAAGGGCCAAAAT
TCGCGAAAATCGCGAAAATCGCGAAAGTTTCTGCTCGCGAAAGTTTCTAC
GCCTAAAGTAAAGCCTGGAAGCTGAAATCGCAATTCTTGTCCATTCTTTA
AATTCTGAACAACTTGAAAATAACCAAAATTCTCAATATATTCCGAACTT
CATTCCAAGGTGACACGCCCAACAAAACAAAAAAACATGAAAAGATTGTC
CTCCCATACAACCCATACATGAAGTCTTACTCATCAAGCAACATTGATTT
GTTCGAACAGTTATGCACAAACTGGGACCAAGTCAACACACAAGATTTTG
TCCTCCCGACTGGCGAAGACTTTCACACTGTTGTAAAAGAAAAGTCTTTT
GGTGAGGGACACTTTTTCAAATCAAAACGTTTGTATGTTTCCGGAGTCTT
GATTGAAAGAAAATGTGATTTCCTTCGAGAAGATTCTGGTGTGAGTATGT
GTCCTCGAAGTTTTCAAGAAATATCTCAATGTCCAACTACAGAAAATACG
AGATTTCAGAATTTGAATTCGAGCAAGAATGTAAAAAAACAAAAGCTGAA
AATTGAAAATTCTACATTATGTACCTATCTTATTTTTTAAGCATTTTGTA
CCGCTGTTTCTTTTACGTATTTCAAAAACCTTATTTTTGTCTGCAGAGTG
ATGATTTTAAATATATAGACCATCAGCGCGGTGGCAGTGGCAGTGGGGCA
CCAAAAAACGACCAAAAAGAGAGAAAATACCTAAGGATTTTCGTGCTCGT
TTCCCTCGCTTGATTTTTACACAGATGTTTACTTTTAATAGGGGCGCTAA
AACCAAAGTTTTCTAAAATTGCCTTCCCAGTTTGACCGAACTTCGTGGAC
CCACCACTCTATTGGAATCAACAAGTAAAAACTATGTCACACAACTACCA
AAATTCACCCAATATAATCTGCAGCGTAGATAACAAAAGTTTTTACAACA
TAAAAATTGAGATGTCAAATAAATCTAAAGTTTGTGTTCCTCTTTGACCT
TGTTTTTATATTGATTTCAAGAATTTTGTTTTGAAGTCTTAAGAACGAAC
CACTGCTCTCAACTTCTCCCTATGAAATAGCTTCAAATGACTGTTACTGT
TCTGGCTGTTACTACTTTTTGACCATTTTTTCTCGTTTAGAAGTAACAAA
AATAAAATATCAAAGAAATTGAACTCAAAATGACCACATTACAACTGGCA
GACAAATTATGGATAGCTGACCTCCATGACTTAGATCAAGTAACTCGAAA
TCATCAATCCTTGATCTTCTTGAAAACGTATCACGAAACACTTTTTATAC
AGCAGAAAGTTGTATTCGCCAAATCTTATCGAAAGCGTTCACCCATGGTC
ACTGTTGAGATGTCAACCCAGGGCTATCAACCTTCATCCAAAGATCTTGC
GCATGTCTTAAACATGCGCTCTTGTTACCAATCACCCTTTACCATACTAG
CTGGAAGCTATTGGGAAAACGAAATCAAAAATCAAGCAATCATTAAATTC
TACGACACTTATCTATCGAAAGATCCAATTGTGATTGAACNTCATTAAAT
TCTACGACACTTATTTATCGAAAGATCCAATTGTGACTGAACATCAAGAT
TTTCATAATAAAGAACTAAATAATAACGACGCTAAAGATAGTTGGTCGTG
GAAACAACCTTACAGTAATTTCCCTTTTCTAATGTTTACAACAGAAGAGC
CAAATCCACGTCAGATGTTTTTATCTCACCGTGAAGAAGTCGATTGTCTT
GTTTCATGGACGGTCAATCAAAGCCATCACACTATCGGCAAAGCTTTCTT
CTTTCCATATGGTGTACCAGATATGCTTGGAGAAGCCGGTATAGCAGTCT
TCCGGAACTCTTACACGAACAGTTTGATGGGTCTATACATGTGTGAACGA
CTTCGCGACACATTGATAACTGAGGATTGTAAAAAATATCGTACAGCTCA
AGAAAAGAATGTCCCAGAAATGTTGATGTTCAAGAAGTCAGCCAGTACTT
TGCCCAATGGTGCTTGCTNCACAGCGCAAGAAAAGAATGTCCCAGAAATG
TTGATGTACAAGAAGTCAGCCAGTACTTTGCCCAATGGTGCTTGCTTTTC
CCAACGAGGTAAATAATCCCAATTCTCTTTTTATTTTTTTCCTTTAAGAC
CTTAGGGTAACTAATTTTGGCGCATTTGGCGAATTGCAGCCTTCGCCAAA
ACGAAATATATTTCTAAAGTAGCATCTATTTTTGCTCGTGTAAAACACTC
GTTTTAGGTAGAAAAGCTTCAATTCCTTGTCATTCGCCAAAGTTAGAACC
CTTAAGGTAGGCCTTTTTTCAGTCCTTCAGAATTTAAAACATTTCTCCTT
TACGGTTCTTAATTTGGGGGCGCACCAAGGCTACAAGGACTGCACCAGTG
ATGCTTTTCAAATCTCCTCTTTCAGATAATCTCAAAGCACTACCAGATGA
CTGGGAAGACGACTTTGATGATTCGGAAGGTGATTTGACACCAACTGATT
CTGATGAGTTGTCTTCCGATGAATTCTTCGAAACTGATTCTGAAGACGAG
GCGGAAAACTGCTCTCAAAATGATGGAATTGACTCGAATTTTGTTGAATA
CGCAAGTAAAGGATACTACTCGCTCGTTCGCAAAGAAATTTTTCGCGGAA
AAGTAGATATCAATATCTCAAATGAATCGACCGACTTTGAAGGAAAATGG
GGAGATACTGCTCTCATCGCTGCTACACGAAATTGCCATTTCGATATCGT
TATGGATTTGCTTCGTTCGAATGCAGATCCTACCCTTGAGATTTTTTACA
GTTCTGGTGATTCTGGCACTGCATTGAAAGTTGCTTCAGAATGCCTACAA
TTGCGTGAACTGGTGAAAGATGATATTTTACACCTGAAATATTCAGAAGT
GATTGAGCCCAGTGATCATGAAGCAGCTGCTTTAGATATTCTCTACAGAA
TCAAATGTTTCCAAGATATCATTGATGTATTGAGCATAGCTGAATCGTTT
TGGCCAAAGGCATCTTATTATTCCACTGATGTCTCGAACGAACGCAAGGA
AAAGTTGAAGAACTCTCCCAACAAACCAACCAATGAGAGAGAATTGAAAG
AAAAGCTTATTAAATTCGAACCCAGATCTCTTGATAAGAGCACCATCAAG
CCATTGGCCGATGCGATCGTTCAAATCCGAAAGAAAGTTGAACGAGAAAC
ATCTCGGTTGTCTTTGTACATGAGGAATAACATGTGTGCATTGAACGCTT
ATTGTTCTGCAAGTCCGGCAACTGTGGATTGTCAACATGGTTGTTGCGTC
AGATGCTGCCCAGGACCTTGCAAAACACATGGTTTGAGAACCGAACAGCG
TAAGTCTTTTTGAGGACCTATAGTTTTTTAGATTTGGTTTGATTCCCCTG
TATAGTGAGAAAGGTTGTTTGAGAAAATGGTTTTTGTTGCTCGTCTGCTG
GAAATTTGGGCAAACGAGTGTTTTGTATCTAAAACCATTACGTTAACAGA
AAAAATTGCGCCATCCACGGCTGTTTTCTAGTTCAAATTTAGTCTAATTT
TCTGAGGAGGAATGTTAATGAAGTCACAAAGAAAATCTCCTTCCATATCA
TTGCATTGATTGTACACCCCTGTGCCACAGGGTTTCCCCGGTGGGAAAAC
ACCCTATAATTTCAGCCCCTCTGAAAAATTGACTTTATTTTCATCCCTAT
TTGAAATTCTATGGAAAGAAGTTGCACTCCAAAACCATCTCCACTGGAGT
TTTCTACCTGGGAGCCATAGAATTTCTATCCCCCATGGGATTTCGATGGA
TATTTTTATCCCCATATTGTGGGAAGAAGTTCCACCGGGCCTGTGAGACG
TTGGGGGTTTGTCTAAAAATGTCTCAATTTCTTTTTATCAGGCGTATTCG
CGGCACAATATGGGAGTTCGAAAGTCATTTGTGTCAAGCAAGATCTCATT
CCGTACAACACAACCTTTCGAAGTCCCATGAATTCCAATTTTGATGTTTT
TGCCGTCAAAAACATGAATTGGGATGATGAAAAATCTGAAGAATTCATTT
TAAGCTCTGGCGAAGAAATTTGTGTCGTTCATAAGAAAAGGATGTTTGAC
ACACCCAAAAACAGTCCAGGTCTGAAAAAACCAAATTAGAAATCTCGTTA
AATCTGACATACGCTTATGGAGTTTTGATCGCTCAAAACAGCTCTTACAA
TTATGACTACGACAGTGAGGGTGACAGACCTGCTGGTATTTGTGGAAGGT
TCCATAAATTGGTCGGATCGCCAACTACTGAAATCATCAACAGGAAAATA
CGAGATTATCAACTCCAGAAATGCCAGGAGGATGCTACTGGGAAACCTAT
TCCAATCGAAGTGTTATCGGAGGGTTATACGTTCGCCATGGTAACTGAAG
ATCCTTCTCTTAAAGTTTTGGTGACTGATTCGGTATCTTTCGGTGATTTT
AAAGATGCTCAAAACAAACAGCCTCAAAAAGTCAGTGCATCTAGCAAAGC
TAACGTCAACACAGTGCGTCACTTCAAACCAGGTCTTTACCATGTCAGTG
CTGTCAAACCAGTGAAAGATTGTGATCCATTTGTGATGTACCACCATGAG
AGTATCGATCCACAGAAATTGATGGATCAGATTTTATTGATGACTGATGA
TTACGGTGATCGTTCACCAGGTGTAGAGAATGTGATCGATGGTGAGGATT
GGTGTGAATGGAGAAACTGGGATGGTTCTTTCAGCAGGAGGGTTCAATTC
GTTTCGAATGACCACGGTGAAGCGAGGAAAAACGAGGAATTAGCTGCTAG
AAATATCATTTATTTTTGCCCTACAGAATCAGCTGGCTTGTTGGAAAGAG
CTGTAGAAGAGAGAAAAACAATAAAATCAAAAGTGTTTAAAAAGATGGGA
GGAGTTTTGGATGGAGATGCAAATGTCATTGCATTAGCTGTTAAAACTGC
TCGAATGAACTCCACTGGGAATTGGATTTACGGCAGGATCTTTCGAGATG
AATTAAGTGGACAAAATTTCGCCCTGGTTGTCCATTTTAATCACGGTTTG
CATTTTGCACAAACCACTGACGAACTTAAGGAACAGTTTCCTGGAAAGAA
ATTCACTTCAATCAAAGAAACGAATTTGAGATTCAATATTACCAACTTTG
AAATATAAAAAGACTTTACTTTACTGGACAGATTTTAATAAAAACGAAAA
CTCTTAAAAACAAAACAAATTAGGACAGGGGGGGGCACGCAGTTACTACA
AGACAGTATGACACTTACTACCGTGGTGGGTACTGTTTCAAAAGATTTGA
A Coding sequence (CDS) from alignment at scaffold_313:458835..468585- >TCONS_00058752 ID=TCONS_00058752|Name=TCONS_00058752|organism=Clytia hemisphaerica|type=CDS|length=4797bp|location=Sequence derived from alignment at scaffold_313:458835..468585- (Clytia hemisphaerica)
GCGTATTCGCGGCACAATATGGGAGTTCGAAAGTCATTTGTGTCAAGCAA
GATCTCATTCCGTACAACACAACCTTTCGAAGTCCCATGAATTCCAATTT
TGATGTTTTTGCCGTCAAAAACATGAATTGGGATGATGAAAAATCTGAAG
AATTCATTTTAAGCTCTGGCGAAGAAATTTGTGTCGTTCATAAGAAAAGG
ATGTTTGACACACCCAAAAACAGTCCAGGTCTGAAAAAACCAAATTAGAT
AATCTCAAAGCACTACCAGATGACTGGGAAGACGACTTTGATGATTCGGA
AGGTGATTTGACACCAACTGATTCTGATGAGTTGTCTTCCGATGAATTCT
TCGAAACTGATTCTGAAGACGAGGCGGAAAACTGCTCTCAAAATGATGGA
ATTGACTCGAATTTTGTTGAATACGCAAGTAAAGGATACTACTCGCTCGT
TCGCAAAGAAATTTTTCGCGGAAAAGTAGATATCAATATCTCAAATGAAT
CGACCGACTTTGAAGGAAAATGGGGAGATACTGCTCTCATCGCTGCTACA
CGAAATTGCCATTTCGATATCGTTATGGATTTGCTTCGTTCGAATGCAGA
TCCTACCCTTGAGATTTTTTACAGTTCTGGTGATTCTGGCACTGCATTGA
AAGTTGCTTCAGAATGCCTACAATTGCGTGAACTGGTGAAAGATGATATT
TTACACCTGAAATATTCAGAAGTGATTGAGCCCAGTGATCATGAAGCAGC
TGCTTTAGATATTCTCTACAGAATCAAATGTTTCCAAGATATCATTGATG
TATTGAGCATAGCTGAATCGTTTTGGCCAAAGGCATCTTATTATTCCACT
GATGTCTCGAACGAACGCAAGGAAAAGTTGAAGAACTCTCCCAACAAACC
AACCAATGAGAGAGAATTGAAAGAAAAGCTTATTAAATTCGAACCCAGAT
CTCTTGATAAGAGCACCATCAAGCCATTGGCCGATGCGATCGTTCAAATC
CGAAAGAAAGTTGAACGAGAAACATCTCGGTTGTCTTTGTACATGAGGAA
TAACATGTGTGCATTGAACGCTTATTGTTCTGCAAGTCCGGCAACTGTGG
ATTGTCAACATGGTTGTTGCGTCAGATGCTGCCCAGGACCTTGCAAAACA
CATGGTTTGAGAACCGAACAGCATGTTTACAACAGAAGAGCCAAATCCAC
GTCAGATGTTTTTATCTCACCGTGAAGAAGTCGATTGTCTTGTTTCATGG
ACGGTCAATCAAAGCCATCACACTATCGGCAAAGCTTTCTTCTTTCCATA
TGGTGTACCAGATATGCTTGGAGAAGCCGGTATAGCAGTCTTCCGGAACT
CTTACACGAACAGTTTGATGGGTCTATACATGTGTGAACGACTTCGCGAC
ACATTGATAACTGAGGATTGTAAAAAATATCGTACAGCTCAAGAAAAGAA
TGTCCCAGAAATGTTGATGTTCAAGAAGTCAGCCAGTACTTTGCCCAATG
GTGCTTGCTNCACAGCGCAAGAAAAGAATGTCCCAGAAATGTTGATGTAC
AAGAAGTCAGCCAGTACTTTGCCCAATGGTGCTTGCTTTTCCCAACGAGG
CGTATTCGCGGCACAATATGGGAGTTCGAAAGTCATTTGTGTCAAGCAAG
ATCTCATTCCGTACAACACAACCTTTCGAAGTCCCATGAATTCCAATTTT
GATGTTTTTGCCGTCAAAAACATGAATTGGGATGATGAAAAATCTGAAGA
ATTCATTTTAAGCTCTGGCGAAGAAATTTGTGTCGTTCATAAGAAAAGGA
TGTTTGACACACCCAAAAACAGTCCAGGTCTGAAAAAACCAAATTAGATA
ATCTCAAAGCACTACCAGATGACTGGGAAGACGACTTTGATGATTCGGAA
GGTGATTTGACACCAACTGATTCTGATGAGTTGTCTTCCGATGAATTCTT
CGAAACTGATTCTGAAGACGAGGCGGAAAACTGCTCTCAAAATGATGGAA
TTGACTCGAATTTTGTTGAATACGCAAGTAAAGGATACTACTCGCTCGTT
CGCAAAGAAATTTTTCGCGGAAAAGTAGATATCAATATCTCAAATGAATC
GACCGACTTTGAAGGAAAATGGGGAGATACTGCTCTCATCGCTGCTACAC
GAAATTGCCATTTCGATATCGTTATGGATTTGCTTCGTTCGAATGCAGAT
CCTACCCTTGAGATTTTTTACAGTTCTGGTGATTCTGGCACTGCATTGAA
AGTTGCTTCAGAATGCCTACAATTGCGTGAACTGGTGAAAGATGATATTT
TACACCTGAAATATTCAGAAGTGATTGAGCCCAGTGATCATGAAGCAGCT
GCTTTAGATATTCTCTACAGAATCAAATGTTTCCAAGATATCATTGATGT
ATTGAGCATAGCTGAATCGTTTTGGCCAAAGGCATCTTATTATTCCACTG
ATGTCTCGAACGAACGCAAGGAAAAGTTGAAGAACTCTCCCAACAAACCA
ACCAATGAGAGAGAATTGAAAGAAAAGCTTATTAAATTCGAACCCAGATC
TCTTGATAAGAGCACCATCAAGCCATTGGCCGATGCGATCGTTCAAATCC
GAAAGAAAGTTGAACGAGAAACATCTCGGTTGTCTTTGTACATGAGGAAT
AACATGTGTGCATTGAACGCTTATTGTTCTGCAAGTCCGGCAACTGTGGA
TTGTCAACATGGTTGTTGCGTCAGATGCTGCCCAGGACCTTGCAAAACAC
ATGGTTTGAGAACCGAACAGCATGTTTACAACAGAAGAGCCAAATCCACG
TCAGATGTTTTTATCTCACCGTGAAGAAGTCGATTGTCTTGTTTCATGGA
CGGTCAATCAAAGCCATCACACTATCGGCAAAGCTTTCTTCTTTCCATAT
GGTGTACCAGATATGCTTGGAGAAGCCGGTATAGCAGTCTTCCGGAACTC
TTACACGAACAGTTTGATGGGTCTATACATGTGTGAACGACTTCGCGACA
CATTGATAACTGAGGATTGTAAAAAATATCGTACAGCTCAAGAAAAGAAT
GTCCCAGAAATGTTGATGTTCAAGAAGTCAGCCAGTACTTTGCCCAATGG
TGCTTGCTNCACAGCGCAAGAAAAGAATGTCCCAGAAATGTTGATGTACA
AGAAGTCAGCCAGTACTTTGCCCAATGGTGCTTGCTTTTCCCAACGAGGC
GTATTCGCGGCACAATATGGGAGTTCGAAAGTCATTTGTGTCAAGCAAGA
TCTCATTCCGTACAACACAACCTTTCGAAGTCCCATGAATTCCAATTTTG
ATGTTTTTGCCGTCAAAAACATGAATTGGGATGATGAAAAATCTGAAGAA
TTCATTTTAAGCTCTGGCGAAGAAATTTGTGTCGTTCATAAGAAAAGGAT
GTTTGACACACCCAAAAACAGTCCAGGTCTGAAAAAACCAAATTAGATAA
TCTCAAAGCACTACCAGATGACTGGGAAGACGACTTTGATGATTCGGAAG
GTGATTTGACACCAACTGATTCTGATGAGTTGTCTTCCGATGAATTCTTC
GAAACTGATTCTGAAGACGAGGCGGAAAACTGCTCTCAAAATGATGGAAT
TGACTCGAATTTTGTTGAATACGCAAGTAAAGGATACTACTCGCTCGTTC
GCAAAGAAATTTTTCGCGGAAAAGTAGATATCAATATCTCAAATGAATCG
ACCGACTTTGAAGGAAAATGGGGAGATACTGCTCTCATCGCTGCTACACG
AAATTGCCATTTCGATATCGTTATGGATTTGCTTCGTTCGAATGCAGATC
CTACCCTTGAGATTTTTTACAGTTCTGGTGATTCTGGCACTGCATTGAAA
GTTGCTTCAGAATGCCTACAATTGCGTGAACTGGTGAAAGATGATATTTT
ACACCTGAAATATTCAGAAGTGATTGAGCCCAGTGATCATGAAGCAGCTG
CTTTAGATATTCTCTACAGAATCAAATGTTTCCAAGATATCATTGATGTA
TTGAGCATAGCTGAATCGTTTTGGCCAAAGGCATCTTATTATTCCACTGA
TGTCTCGAACGAACGCAAGGAAAAGTTGAAGAACTCTCCCAACAAACCAA
CCAATGAGAGAGAATTGAAAGAAAAGCTTATTAAATTCGAACCCAGATCT
CTTGATAAGAGCACCATCAAGCCATTGGCCGATGCGATCGTTCAAATCCG
AAAGAAAGTTGAACGAGAAACATCTCGGTTGTCTTTGTACATGAGGAATA
ACATGTGTGCATTGAACGCTTATTGTTCTGCAAGTCCGGCAACTGTGGAT
TGTCAACATGGTTGTTGCGTCAGATGCTGCCCAGGACCTTGCAAAACACA
TGGTTTGAGAACCGAACAGCATGTTTACAACAGAAGAGCCAAATCCACGT
CAGATGTTTTTATCTCACCGTGAAGAAGTCGATTGTCTTGTTTCATGGAC
GGTCAATCAAAGCCATCACACTATCGGCAAAGCTTTCTTCTTTCCATATG
GTGTACCAGATATGCTTGGAGAAGCCGGTATAGCAGTCTTCCGGAACTCT
TACACGAACAGTTTGATGGGTCTATACATGTGTGAACGACTTCGCGACAC
ATTGATAACTGAGGATTGTAAAAAATATCGTACAGCTCAAGAAAAGAATG
TCCCAGAAATGTTGATGTTCAAGAAGTCAGCCAGTACTTTGCCCAATGGT
GCTTGCTNCACAGCGCAAGAAAAGAATGTCCCAGAAATGTTGATGTACAA
GAAGTCAGCCAGTACTTTGCCCAATGGTGCTTGCTTTTCCCAACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058752-exon-scaffold_313-1575043694:468475..468585 | TCONS_00058752-exon-scaffold_313-1575043694:468475..468585 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1575043694:462028..462995 | TCONS_00058752-exon-scaffold_313-1575043694:462028..462995 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1575043694:460787..461710 | TCONS_00058752-exon-scaffold_313-1575043694:460787..461710 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1575043694:458835..460244 | TCONS_00058752-exon-scaffold_313-1575043694:458835..460244 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1510915933:468475..468585 | TCONS_00058752-exon-scaffold_313-1510915933:468475..468585 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1510915933:462028..462995 | TCONS_00058752-exon-scaffold_313-1510915933:462028..462995 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1510915933:460787..461710 | TCONS_00058752-exon-scaffold_313-1510915933:460787..461710 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1510915933:458835..460244 | TCONS_00058752-exon-scaffold_313-1510915933:458835..460244 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1491911889:468475..468585 | TCONS_00058752-exon-scaffold_313-1491911889:468475..468585 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1491911889:462028..462995 | TCONS_00058752-exon-scaffold_313-1491911889:462028..462995 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1491911889:460787..461710 | TCONS_00058752-exon-scaffold_313-1491911889:460787..461710 | Clytia hemisphaerica | exon |
| TCONS_00058752-exon-scaffold_313-1491911889:458835..460244 | TCONS_00058752-exon-scaffold_313-1491911889:458835..460244 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_313 | supercontig | scaffold_313:458835..468585 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR020683 | Ankyrin_rpt-contain_dom |
Blast
The following BLAST results are available for this feature:
|
