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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058629 ID=TCONS_00058629|Name=TCONS_00058629|organism=Clytia hemisphaerica|type=transcript|length=1164bp
acacacCTTCAGTATAAGGGGGATATCTCTTGAAAGGTTGCTAATACACC
CtataaagtatatattttctgaaagctgGGTAAAAAACCTTTgagatgaa
agaaaaaaaaaatcaaaatttttattttgctgacgtcagcagggatttca
agtttgaaaataaaaaataaattttaacgtaaaaatatttttttttcaca
aaaatcatcATAAAATCCAAAATAACTGTTAGTTTTCTCTTAAACTTTGt
acaaatgttcttatatacaaTATAATTAAATGCTGAAAATTTTAGACCTA
AGGctttacaaaaactgaaaatattgatatttcgGTGAACGCGTAAAATG
ACAGAAAATGGtataaaattgtaataaatcTACTATCAGTTTCATGACAT
GAAATTCTTCTAATGAGTCTATTTCAAGGGTTCAAAATCATGAAACTAGA
CATTCTAAGtatatttaatgatgtcttGCTAGGAATTAGCCAGTTAATAt
atccattttcaaattttaaccatGTACGGCAATAACGTGAGCTATGCTAC
GTCCATTCAGCGTGTCATGCGGTAACTTGAAAATCAGAAATGTCCATGAG
ATGAAATTGGTCAAATGACCTTTCTGTTGTAAACAAAGGCCATTGTATGT
GATTTTAGCAAGTAAATCAGTGATAAATCCAAGTGCTAGTCATTTATATG
GTCATGGAGTCGGCTTGTGCAGCCTGGTCTTTGTCGTCACGAAATGTTGA
ATTATATACGAAAACTTTGAGCCACACCACAAGAGCTTGGGTAGTCCAAA
TGAGAGCCACTTTGTATGCAAATTGAGTGTTCTTTCAGAATTATACAAAA
AAGATTCAGTTAGCCTTGTTGTGGCTTGAAAACTGAATATGAGACATGTT
ACTAATGTCATTTCATCTGACAAAAATgacgaccctgccggtgcacccga
cagtcgggtgctgtcgggtgttttgtcgggtgctgaaatttctaaatttg
cgaaaacacccgacaattagtgcacccgacagtcgggtgctgtcgggtgt
tttgtcgggtgctgaaatttctaaatttgcgaaaacacccgacaattagt
gcacccgacagtcgggtgctaaAATTCTTAACTTAGTGAGAACACCCGAC
AATCAACACCCGAC Run BLAST on NCBI transcript from alignment at scaffold_311:946541..947704 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058629 ID=TCONS_00058629|Name=TCONS_00058629|organism=Clytia hemisphaerica|type=transcript|length=1164bp|location=Sequence derived from alignment at scaffold_311:946541..947704 (Clytia hemisphaerica)
GTCGGGTGTTGATTGTCGGGTGTTCTCACTAAGTTAAGAATTttagcacc
cgactgtcgggtgcactaattgtcgggtgttttcgcaaatttagaaattt
cagcacccgacaaaacacccgacagcacccgactgtcgggtgcactaatt
gtcgggtgttttcgcaaatttagaaatttcagcacccgacaaaacacccg
acagcacccgactgtcgggtgcaccggcagggtcgtcATTTTTGTCAGAT
GAAATGACATTAGTAACATGTCTCATATTCAGTTTTCAAGCCACAACAAG
GCTAACTGAATCTTTTTTGTATAATTCTGAAAGAACACTCAATTTGCATA
CAAAGTGGCTCTCATTTGGACTACCCAAGCTCTTGTGGTGTGGCTCAAAG
TTTTCGTATATAATTCAACATTTCGTGACGACAAAGACCAGGCTGCACAA
GCCGACTCCATGACCATATAAATGACTAGCACTTGGATTTATCACTGATT
TACTTGCTAAAATCACATACAATGGCCTTTGTTTACAACAGAAAGGTCAT
TTGACCAATTTCATCTCATGGACATTTCTGATTTTCAAGTTACCGCATGA
CACGCTGAATGGACGTAGCATAGCTCACGTTATTGCCGTACatggttaaa
atttgaaaatggataTATTAACTGGCTAATTCCTAGCaagacatcattaa
atataCTTAGAATGTCTAGTTTCATGATTTTGAACCCTTGAAATAGACTC
ATTAGAAGAATTTCATGTCATGAAACTGATAGTAgatttattacaatttt
ataCCATTTTCTGTCATTTTACGCGTTCACcgaaatatcaatattttcag
tttttgtaaagCCTTAGGTCTAAAATTTTCAGCATTTAATTATAttgtat
ataagaacatttgtaCAAAGTTTAAGAGAAAACTAACAGTTATTTTGGAT
TTTATgatgatttttgtgaaaaaaaaatatttttacgttaaaatttattt
tttattttcaaacttgaaatccctgctgacgtcagcaaaataaaaatttt
gattttttttttctttcatctcAAAGGTTTTTTACCcagctttcagaaaa
tatatactttataGGGTGTATTAGCAACCTTTCAAGAGATATCCCCCTTA
TACTGAAGgtgtgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058629-exon-scaffold_311-1491911889:946541..947704 | TCONS_00058629-exon-scaffold_311-1491911889:946541..947704 | Clytia hemisphaerica | exon |
| TCONS_00058629-exon-scaffold_311-1510915933:946541..947704 | TCONS_00058629-exon-scaffold_311-1510915933:946541..947704 | Clytia hemisphaerica | exon |
| TCONS_00058629-exon-scaffold_311-1575043694:946541..947704 | TCONS_00058629-exon-scaffold_311-1575043694:946541..947704 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:946541..947704 . |
Blast
The following BLAST results are available for this feature:
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