TCONS_00058538 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058538
Unique NameTCONS_00058538
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2744

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058538 ID=TCONS_00058538|Name=TCONS_00058538|organism=Clytia hemisphaerica|type=transcript|length=2744bp
caaacaatgatacagcaatggataattactgtttcatgcatattgtaata
atcaTGCATgggtgtatcattgtttttctgctggactacataattattca
acagggtggcctctttgaaaaaaggtctatgatgGTCGACAccgtaaatt
ttgatttaacccCTGCCTCctgacattttgaaaatgttgaaagaataaaa
aaatgacaCAAATGGTCTAAAATTTTTGATCAAGCAGCTTCGTAACTGTT
TAACTTGGCTTTAAATTCAACATATAATGTCAATTACCCCTCAGCTTTGC
CTTATGTCCAAGttcctcttctttttcttcacttGCCTTTCTCCACAACa
cactttaaaaattttcagtgatttttttACGCCATGCCACTTTTTGATAT
AAACAATTGGCGTGGTCAATGCAACTAGGTTACTAGTAAACGTGTCGGAC
CTTATATGATCGAAATTTATTGTATGGTGTGTGTCCATAGTCATCGAATC
CGGAGTGTTTTCGTTCGGTCCGGATTGGATTTGAAGAtcgaagaaacaac
aaaaacactGGGAGGACTGCGTAGCACCTTGTCGCCTTGTATGTTGTAGG
AAAAATCAATCACCCATCAATCATGACTGATTATGAAAGAATACTGTGTg
ttaaaaatgaagtttttatgTACAAGATACCCCCAAGGAATAGTGCAAGA
GGATATAGGGCTGCAGATTGGAAGCTAGAACAACCAGACTGGACAGTTCG
AATGAGGATTGTGGAAATGAATGGTAGATGTATTTTGAATTTCGAAGATA
AAATGTCAGgTCAGCTGTTTGCTAAGGCACCAATCGATGAATATCCAGGT
CCAACAGTTGAAGCAGTATCTGACAGTAGTCGATATTTCGTTATCAAAAT
ACAAGAAGACGGAGgAAGGCATGCATTCATTGGAATGGGTTTCAGTGATC
GTGGTGATTCTTTTGATTTCAATGTTTCTCTTCAAGACCATTTCaaacgc
GAAAAATTGGAGGATGAAATTTCCAAAGAAGAGAAAAAGCCACAGAAACA
TGTTGACATGAGTTTCAAAGAAGGACAAACCATCAAAATTAACTTCGGGA
ATAAATCAGGACAAGATTCAAGGCCAAAACCTAAAGCACAAGcaGGTGGT
AATATTGGTTTCCTACCGCCTCCACCCGGAGGAAACACACCTAAACTGGT
GCCTCCGCCCGTAGGAGGTGTACCACACGCACGATCAGCGACACAGCCTG
CACAACAAGATCCATTTACGAACGACCCATTCACGCAACAACCAGCAACA
CAGACTCAACAACAACCTAAAAGTACATCCGATTGGGGTGATTTCTCATC
GTTCGGCCCATCAAACACACAAGCATCAACAAATCCATCAACGACGAATA
ACAGCGGTGGCGGTGGAAATTGGGTCACTTTTTAAATTCAGATGAGTAGA
ATTGTAGTGTTGTTTCCAATGGtatctttatttattttgaatgaatttga
gagaaatttcgtTATTAGTTGGTTATTTGCGattgattatttttcaaata
ccATGGAATGATGGAATACTCACAAAAAGGAAATCAATGATAATGAatta
aattgaatatttttaattgGTAATTTATGGACTTGCAACGAATGAAGTGT
TTAGGTTTTGACTACGGCGTGTCTGGTCAAAATTGTGATAAATGCGCCTC
TAATGTGtaacacaaaaaaataattaataaaactgaaaattcgtAAAACC
TAAAGTTTTTCTGTGAAAGTTAttcatttgtcaaatttttgaatAAGGTG
CAATACACTGCCATGATTAACGCACTAGATAcgaaaggtgatttttttga
aaattgctggGCTTGAAATAACGGTAAGACATTGGatattgtccgaccca
aaatgctccttgtccgacccaaattgctccttgtccgacccaaaaatcat
aattttcaaactaaagaaaaaactctgatcggacattttgtccgaccgAC
GAAATCGTTATTTCAATCCTTGAAATTGAGTtgcagttttttaaaaatta
attataattTGTTTCCTTCCTAATTTTTAATAGCAAACAACTCAATAATT
ACATAAAGTGCATCCATTAAAATGAAATAGAATTTGAAATATAGTAAAAc
ccttgaaatttttttaacgagATTATATTGGTTTTTATTAAGGCAAATGT
GAAAAATTGGTCGTTGTATTCAAAATTATGAAgactttttctttaaaatg
aatCCTTTTAATCATTTGGTATGGACGCACTGTTTAATTTGTAGATATTA
CTANTATTGGTTTTTATTAAGACAAATGTGAAACATTGGTCGTGGTATTT
TAAATTATAAggtctttttctttaaaatgaatCCTTTTAATCATTTGGTA
TGGACGCACTGTTCAATTTGTAGATATTACTGCGAGTTACCGTTTATGTT
TGTATTTTtggcttttctttttttagccaGAAGGGAGTATAGTTATTAAT
TTTGATCAATTCTAATGAATTAAATTTGGCATAAATATCATCTAGTTTTG
TCTTGAAGATTGTATTTGTCTTAGGGAAAAACATTTCGTTTGTAGATTTT
TTGCGCTATAAGCGAATTTAgctctatttttttctttattatctttttta
tgtttcttaatttttgtatAGTAGAATAATAATATGAGACTTTTCCCTAA
ATTATGCTGCGCCTTATGTACTTTCATTTAAAACTCTTTCCCTA
Run BLAST on NCBI

protein sequence of TCONS_00058538-protein

>TCONS_00058538-protein ID=TCONS_00058538-protein|Name=TCONS_00058538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MTDYERILCVKNEVFMYKIPPRNSARGYRAADWKLEQPDWTVRMRIVEMN
GRCILNFEDKMSGQLFAKAPIDEYPGPTVEAVSDSSRYFVIKIQEDGGRH
AFIGMGFSDRGDSFDFNVSLQDHFKREKLEDEISKEEKKPQKHVDMSFKE
GQTIKINFGNKSGQDSRPKPKAQAGGNIGFLPPPPGGNTPKLVPPPVGGV
PHARSATQPAQQDPFTNDPFTQQPATQTQQQPKSTSDWGDFSSFGPSNTQ
ASTNPSTTNNSGGGGNWVTF
Run BLAST on NCBI

transcript from alignment at scaffold_311:645041..656682-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058538 ID=TCONS_00058538|Name=TCONS_00058538|organism=Clytia hemisphaerica|type=transcript|length=11642bp|location=Sequence derived from alignment at scaffold_311:645041..656682- (Clytia hemisphaerica)
CAAACAATGATACAGCAATGGATAATTACTGTTTCATGCATATTGTAATA
ATCATGCATGGGTGTATCATTGTTTTTCTGCTGGACTACATAATTATTCA
ACAGGGTGGCCTCTTTGAAAAAAGGTCTATGATGGTCGACACCGTAAATT
TTGATTTAACCCCTGCCTCCTGACATTTTGAAAATGTTGAAAGAATAAAA
AAATGACACAAATGGTCTAAAATTTTTGATCAAGCAGCTTCGTAACTGTT
TAACTTGGCTTTAAATTCAACATATAATGTCAATTACCCCTCAGCTTTGC
CTTATGTCCAAGTTCCTCTTCTTTTTCTTCACTTGCCTTTCTCCACAACA
CACTTTAAAAATTTTCAGTGATTTTTTTACGCCATGCCACTTTTTGATAT
AAACAATTGGCGTGGTCAATGCAACTAGGTTACTAGTAAACGTGTCGGAC
CTTATATGATCGAAATTTATTGTATGGTGTGTGTCCATAGTCATCGAATC
CGGAGTGTTTTCGTTCGGTCCGGATTGGATTTGAAGATCGAAGAAACAAC
AAAAACACTGGGAGGACTGCGTAGCACCTTGTCGCCTTGTATGTTGTAGG
AAAAATCAATCACCCATCAATCATGACTGATTATGAAAGAATACTGTGTG
TTAAAAATGAAGTTTTTATGTACAAGATACCCCCAAGGAATAGTGCAAGA
GGATATAGGTAAAACTTTTCTTTCTATTCGTCAATAAATTTAGGAACCAA
ACACCCCCCTTTTTTTTCTTTTTTTTTTTGGAATCGCAATCAAGCCAATC
GAACGTAATCGAATGCGATCAAATAATTGGGATTGATTGATTGTAGAACG
TAATCGAATCTCAATCGAACGGCCGATTCCTGGGTAATTTTGATTCGGCG
TTCGATTCGTTCGATTGACACACCGTCACGTGTGCGTTTGGTTTGGGAAC
GCGAAACACGAACGCGAACTACCCATGTCTAAACTTTTCAATATATCTCC
AGAACTAACAGATTTTTTGAAATTCTGTAAAAAGCTCTAAGTTCCTGAAT
AGTTTTACTATGTTCTGTGAAAAAATCATAACCATCAGTCAAATACTCGT
TCGTCTATCTTTACTTGAAATAGGGACGGGATAAGGCCGATGAAATTTAC
ATATGAGTTTACCGTCGTGAACTTACCCAAAAATAGATGCGGCATGATTT
CATTATTCATTATTCATTATTTTCCCANNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGGCA
GATATATGGGCGGGACGCCCACTGCAGTTGTAGGATTGAGGGCGGCAGCA
TTTTCTGTAATAAATCTTCTTTGTTTACCCGTGTAAACATGCGTATAGAC
GATTTTAACAAAGATAGAGGTTGTAGTTGTAAAGAAATATGGAAATAATG
AAAAATTTATGAATTTTGAACATAATGAAATTTTCATGCGGGTGCTTTTT
AGAGATGCGGGCGGCCGACGGTAAACTCATATATAAATTTCATCGGCCTA
AGGCTGGGACAATCTATTTAAAGGATATGGACAAAAAAGGCACTTTTTTG
GGTGATAATTAAGATTTTACTTAAAAACTTTAATTCTCTTACCCCCGTCT
CGCCCCCCCCCTGATATGAGCAAGGGAACCATAATGGCCACCCCTACTGA
AAATTTCAGATCAAAATAAACAAGGAATTAATTCCTGTAACTTGAAGAAA
ATTGGAAAAAGCTGGTTTTTGACTGTTTCTGATCCTAAAGTGCTATTTAG
TAAAAGCTATGCAATTTATGTTTGGATTTCTAGAAAGCTTACCCATTCAT
TGTTAATACATTTTTTATTTGAAAGTAATCTCTTCATGGAATAAAAAGAT
ACAGTCAATCTTGTAGGGTCATTTTTCAAAAATTTTTTGCCAAATTCGAT
TTTTGCATTTCGCCAATTTAACCTACGCAAACGCACGTGCCGTCTGGGGA
AGTAGATAGATAGAGGATGGCACAAACCACACAAAAAGCCAGTCTAGAAA
GGAGGAAAATATTACGTCCGAGATGCGCCAACTTAACTGGGAATAGTTGA
AAGCAGGCTGGAACTTCGATTTTTGAGGATTACGATTTTACCAGTTTTTT
AGCAATTTTTGCCTCGCTAACCCAAATCTCGCAACCTCTTTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTTCAGCATTCCGAAAAAAACGCATAGCAGAAATTTTTTCATCTTCA
CAGGATTGATTCTCAACAACAAAATACATCTTTTGGTCTTTGGGTTTGTT
TCTGACTTTTTTCCTTCAAAGAATATCAATCACTTTCCTTTTCCCCTTGA
GCGTGCGAGAAAAAAATGATTAGCTCGCGTTTTTGCGTGTGGATTTGATC
CACTCTTTATGATAAAAAAGCTACCGTTGCTTGGAGTTGAGGCTTCTTCA
CAATCACAATAAGTTTTGTCCGAGGACTTCCTCTAACCTTATATGTCCAG
CTGCCATCCTTTTGTAATTTTGTTTTCTCCTTTGCCTTTCTATGCCATTC
TTTGATAGTTTCGCGTTCTTTTTTCAAGAAATCATTGGTTACTCTAAATT
CGTCTTACTTTAATTTGTGGACTGATGCCAGAATCTGACGTTTCTCTTCT
TTGTTCTTTAGCAGTGTGGCTCGAATCCTTCAGATCCTTGGTTAGAAAAA
GCTACACCTGTTTACTTTTTTCTTGCCAGATTCAACAAGCCATCAACAAA
CAAAATTACCAATGACATCTGAAAATTCACATGACCTTTCCACAGTAGAC
ACTTCTAAATTATATGCCATTAGGAAGATATTCAGAAATTAACCAATCGG
GTTTACAATCGGAATTAATACTGTTTTACCTGGGGTTAAACGTATAAAAG
AAAATTGAAACGGTTTATTTTTTTCTTCATTATATATTTAAGTTTCCGTT
ATCAAAATTCTAGAAATGCTAATTTGTAGACCATATTAGAAAATGTTTAT
ATATTTCGCTAATTAAACACTTACAGAAAGATATATTTCTTACTATTTTT
ACCCCGCTTTTTAAACATCGTCTTCTGTGGGCATGATATAAGGCAGAGAC
AAAACACCCTCATCGTAAGATTCTCGTGGGTCGTCTCATTGTTTGTTCCT
TTAGTCAAGTCTGTTGGTCCTATTGTTCATGCTAAATCCATACACGATGA
TGTCAATGTTTGGCGGCATACCTGAAAATAAAAACAAAAAGATTATTATT
ATTTTTGCATAAATTACGCTACATTATACGTTATTATAAAATTATACAAA
ACGAGAGCAAGGCTAGACCGCCCGCATAGAGAGCGTGAGCCCTAATATTT
CAGGGCCATCAGGGGAAAACAAAAGTGATCAATGTTCTTCGAAGGAAGAA
CTTGTAAAAAAAAACTCTAGACAAAAAGATGTCTTTCGAGGTTGGGAATG
GATCCTGCCGAGATGGAAAAAAGTTGACTAGGGTTTTTTTGGCAAACCCA
AAAAGTACTCTAATTTTTTTTCTTCCCTCAAGCCCTGTTGAAGCCCCTGT
ACAATTTTTTTTTGAATAGCCCAATGATTTTCCAAAAAAAAGATTGCCCT
GGTGGGATTCGAACCCACTAAATGCAAAGTTCCAATGATCAGAAACCCAA
TGCTCTAACCACTGCACCATAGATTCATGCCAAGAGAGTGTTTCTGACAG
CTATTTATATTGTACAAACTACAGACCAGGCTATAATAAGAGAAAATCAC
AAAATAGTGTTTATTTCAAGCTCCAACCCTGGTACCCTAACTGATAATAA
CCCAATTCCTAGCCAATCTGATACACAACCACACCCAAATCACATCCATA
CCCAACCACACCCATACCCAACCACACCCATACCCAACCACACTCATACC
CAACCACACCCATACCCAACCCTACTAATTTGTCTGCAGGTCCTGACAAT
ATTCCTGCATGCCAGATCAGAAAAATATATTTGTGTCCTTTGCTTTTTTG
AAGAAGCCATCACCTGGCATCGTTGCAGCATGAGATTCTGGACTAAGATT
CCACTGACTTTTCCCAAGAAAATTTCTTTTACTTTATTTTCACTTACTGT
TTAAATCTCTTTGACAACAAGTTTGTTTTGATACTTCAACCAAGTTTATC
AATCAAACTTTCGCCATCCCATAATCACCAAATGTATATTTAAAGCATTT
TGCATAATTTGAAGAAGTAATTAACAATTTAATCACACACTCGCTGTTCA
CTCGTCTGATAACATCTTGATGGCATTATTTGTTTTATGTTGTTTTTCTC
TAGAGACGCTTTTTCCAGCATGTATTATTGATTGACATGTCAAAGTTACT
GAGTGTCAATAACAGATCTCACAATTTTCCGCAGAAGAACAGACTTTTAT
TATATCTGTTCTGGACCCTTGTGCGATCGCATTTAGGGACACTGTCAAAT
CAAATGTACAAAAAGTGCACACTGTTAAAATGGATGATACCGGGTGTGCC
ACAAAAAAGTTTCTCTCTTTAAAACTAATTTTCTAGAAATCTAAAGATTT
TAAAAGAACCATTCCTACTTAACTGGAAAGAAGAAAGATAAACTTAAATT
TTGATGGTTCATTTATTAAATTCGATTCATTAGATCAAAAGTTATGTTCA
ATTGAATAAAAAAGTTACTTTCTGAAATTGTTAAAAAACGTTAAAAATCG
ACCTATCAAATCAAACAGAAGCATAATTACACGATACATCAGTATTTTCG
TTTCAGTCATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAT
AAAAGGCAGAAAATTCGTCGAAAAAGGCAAAAAAATCTGGTAAAATTCAT
GAAAATACATAAAATATTGGTTTCGAGGTAGATCCAGCCTTACACAGACT
CTATCCAATCTAAAACCGAAAATCGGAGGAAAATTTCGGTAAAAGTAAAT
TAAAGTGATTTTGATGAAGATTTTATACCCTTTCGGCCTTTCAGTTTCGA
AATTTTAATCATGTAAAGGTTATTGCGATTGCCAATTTTATATAAAAATT
TGATAGGTCGATTTTCAACGTTTTCGAGTACTTTCAAAAAGTAACTTTTT
TATTCAATTGAGCATAACTTTTGATCTAATGAATCGAATTTAATAAATGA
CCCATTAAAATCTAAGCTTATCTTTCTTCTTTCCAGTAAAATAGGAATTG
TTCTTTTAAAATCTTTAGATTTCTAGAAAATTAGTTTTAAAGAGAGAAAC
TTTTTTGTGGCGCACCCGGTATAAAAGGACATGTTCATTAAAAGCCACTA
CTAAATCAATCATTGAAGAATTTCAAAAGTACAACTTTAGCTGTAACTTT
TTTTGTAATTGTCACTCACAGGTCAATGGAATTTTTCAAGGATTCTTTAG
GTAAGATAAAAGGGATTGTTTTTTCCCCCGAAAAAAGCAAACGCTAAAAA
AAGAAATATGATGAAAAGTATACAGTGCACTGACTATCCAATTACTTTTT
TTTAGGTGTAAGGTCTATTTTTTTGACATTGCAAATTGTTTAGTTGGAAA
CTTTTTTCTGAAAATTGGAAAAAACCAAGGAAATTTTCCTCAAAATTGCA
AAATGTGTAAGAAATCAAATTTTTCAAAAACTTCCTGAGACAAAGTCAGG
CTAGCTCTAAAGCTCTAAAACAGCATCTAGTAATGGGAATCCAAACTGTA
AAGTGCGCTCACAAACATCAATTTGTCAGATGTAACAAAATTAATAATGG
CACTGTAACCATTGACAATCAAACAAAGCATTTTCTTTCAAGGACCTTGT
AAACATTCGAACAACTTCCATCGAGATAATCTGCTGCAGCTAAGTAACAT
TTTGCACAGTTTAAGGATCGCGCCAAGTTGTAAAAAAGCCACCCGCGGAG
TACACCTCCCTCACAGGTGAAAATGTTTAATCTGTCAATCATTTTCTCAA
GCAAAGAGTACGCGAAGCGATTCTAGCTTTACAATATTGCCGCAGATCAT
CATCACGACTTTTGAAAAATTGAAATTGAAAGAATGCTTAGGATAAACCA
AACAGCAGAAATTGATTTTTTGAATTTCTTTTGACTGCAATGATTAGTTC
CCGCTAAAATTAGTTCCCTTAAAGGTAGATTCAGGGCTTTTACTCAATGG
TCCTTTGCCTTTAACCAAACTTATGATAATTATGCATTAATATGTCTTTG
TTTTGATGCTGAATTTTTTAATTATTCAATATGACATCCTGACTAGCAAA
AGATCTATGGTGTTTACTTGCAAACTGTCTAAAGTGACTAATTTTTCAAC
TCAAATGAATAATCTTTTTTCGCGAGAAGTGGAATTTTAGTCTGAGAAGT
GGAATTATAGTCTTGGAAGTGGAATCTTATGCCAAACAATGGTAACACAC
TCCCAAGGGTTTTTTCAAATTTTAATTTTTTGAAAAAATCAGCCCTCAAA
ATGACTATTATTATATTCAGGGCTGCAGATTGGAAGCTAGAACAACCAGA
CTGGACAGTTCGAATGAGGATTGTGGAAATGAATGGTAGATGTATTTTGA
ATTTCGAAGATAAAATGTCAGGTTAGATTTTTCTTTGTATTTTTCTATTT
CTTTTATAAGGAGGAAAACCATTTTCGTTAAGGCTATCTCAGTTAAAAAC
TATGACAAAAAACATTTAAGAAGAGCCTAGATAGTGAAAATTTGGAAGAT
ACACAGAGAGATTTGGAGTTCAGAATCAAAATGTAAAGGCTTAAATGTAT
AAGGTTTGTGGCAGTGAAATTTGCTGGATTTAATCAATACCACAGGCCTG
GCCATGAAGAAAAGCCTGCGTGTGCCATTATAGCACTTGCAAGCCTTAAA
TTTGGACTTTCAATACCTGTTTTTGCTTGATTTAGGCGTGCTATTTTAGC
ACTCGCAAATAATTTTACGTGTGTGCTAGCGTGTGCGCGTGCTATAGCAC
GCCATTCAAGGCCAGGCCTGATACCACAATAATACCCTCTAAATTCCCCT
ACTGCTACAATTGTAACATGTTTCTTAAAAACAAAGATTTTGAGATAAAA
CTCTAGTGCTCAAAGAGTTTGACGTCAATCGATACTTTTATTTTTCGAAA
TTTCAGGTCAGCTGTTTGCTAAGGCACCAATCGATGAATATCCAGGTCCA
ACAGTTGAAGCAGTATCTGACAGTAGTCGATATTTCGTTATCAAAATACA
AGAAGACGGAGGTATCTTATCAAGGATTTATTAATGTCTGTTTTTGGTGA
AGCTATGATAAAATTATAAGCCAGTATTTTTTTTGCCAGTTTAATTTATT
CATACCTTTGTGTGCTGTTTAAAATGTATCATTATTTTGGTTTTCTTGAA
AAGCTTCAGAAATCCAATGATTGTATTAACCTCTAGCCATTCAAATTTTT
AATTAAAATTCAATGAAATTTAAAGATCTCTTATATAAAACTTACTAATC
AAGCTAATCAAGTTTCTGAAACTCAAAAAACACAAAGACGGGGGTAACTG
TCGGACGGGAATTTTGTACCATGATACATATCCATATATCAAAATCAGAG
GGGATGCATGCAGCCTAATACTAAACTAGATCAGAAACATGGACATTTGA
CATAAACTTTTACATGAATGAAATGAACTTTTTTGTATTACGATTTTGTT
TACCACTTGTGGTAACAATTCAATTTATCTGATTTTCTAAAAGCAATTCG
CACATTTTCCTCTTAAAATTAGTTTTTCTTTGAATTTTAGGAAGGCATGC
ATTCATTGGAATGGGTTTCAGTGATCGTGGTGATTCTTTTGATTTCAATG
TTTCTCTTCAAGACCATTTCAAGTATGTTTTTTTTTAACTGTTTGTAACT
TTTTTTTTTAATTTTCAACTGACCAACTTTTAATACTCTGCTCATTACGG
ACCTCTTTTTCAAATAGAACACAGTAATTACTTTTGAACCGGACATTTTC
TTATATCTTTCAAAAAAGTGTTATCAATTTTGATAAAAAGGGCAAACTCC
TGATTATGTCTAATTACATTGAATTTTCTTTTAAAAACAAGATGTGCAAT
AGTTTTATGCATGTAATAGCTAGTAAGTTCAACCTTATAATTGTCTCGTA
GATTTTTAAGTGAATTTTGACACAAACGATTGACTTTGTTTTTCGCAATC
AACGAAAATTTAAATATTTTTTTTCAGACGCGAAAAATTGGAGGATGAAA
TTTCCAAAGAAGAGAAAAAGCCACAGAAACATGTTGACATGAGTTTCAAA
GAAGGACAAACCATCAAAATTAACTTCGGGGTATCTATTATTTGAGAATT
AAGGAAATGGTTTGGTTTAGATTTTCCCAACCTCCCAGAATCTCCAGGAT
TAACAATATCATTGTCCGATAATAATAAAAGGCACAACAAAAGATCATGG
TACCGTTTGCATTTTTTATTTTTTTATTCTTTTTACGTAAATACTTTGTT
CCTTTTCAGAATAAATCAGGACAAGATTCAAGGCCAAAACCTAAAGCACA
AGGTATGCTGAATTGATTTTGACATTTTATTCGGTTACAATGTTTCTAAT
TCGAACTTCTATTATTCGAACTAAAATATTGGTCCCCTCAGCTGAAAAAG
TGATTTAAATTACTCTCTGTATTCGAATCTTTTGTCCCTTAAACATCGAA
TTAGAGAGAGTCAATTGAATGTTTTTATTTTAACTCTACTCTGTATGAAA
TTGAAAGGTTGAATAAACGAGGAGATAAATTCGACAGTGTTCTGCGCTTC
TGCGTGAAATGTATCAGTCAAGGAGACCTTCACTTAATCAGCTGAAATGT
TCAAAGCATAAAGTAGCTCATCCAAAGCTAAGAATTTGCTCATTTCATAC
TCTGGTATTTATCTAGCCCAGTTTTTTTATAATATATTTTTTGAAAAAAT
TCTAATGATATTTTTACATTTTAGCAGGTGGTAATATTGGTTTCCTACCG
CCTCCACCCGGAGGAAACACACCTAAACTGGTGCCTCCGCCCGTAGGAGG
TGTACCACACGCACGATCAGCGACACAGCCTGCACAACAAGATCCATTTA
CGAACGACCCATTCACGCAACAACCAGCAACACAGACTCAACAACAACCT
AAAAGTACATCCGATTGGGGTGATTTCTCATCGTTCGGCCCATCAAAGTA
AGTGGAATTATTTTTGAAATAGATTTTTCGAGAAAGATGGTATTTTCCCT
CATTAAAAAAAGAGAAGTCATTTTTCCTCGCTCAGGGACAAGCAGTGACT
TTTCAATTCTTTCACAAGTTTTCACGGCACCATATACACTGGAAATTCGT
GCGTTCTCAATAAAGGAAGAAAATATCACACACACGATAATTAACGGGCA
ATGCTTATCTGAATTTTATTTCATTATCATTTTATTTTTCCTACCGTCAT
ATTGTTGAAACTACTCTCAAGCCACCTTATTTGCGTTAAGGGAACTAATT
TTCGTTGTTTTCGTGGGTTTTCGGCAAAACTGCGAAAGTTAGAAGCCGCA
AATTAAATATTTGGCCATTTTGCATAAAAAAAAATTGAAAAATTCCTTAA
AAAAATGAAAGAAATGTGTCCAAAATAGGGCGCCCCGTGAGAATTTATTC
CAGCGAAATGTGATTTTTTTCGATATTTTTTTTCAACCGTGAAAATTAGC
GCCCGCAAAAAATAAGTTCTCTCAAGGTAGGTTGAATATATGATTTGATC
TTTTGAATTTCAGCACACAAGCATCAACAAATCCATCAACGACGAATAAC
AGCGGTGGCGGTGGAAATTGGGTCACTTTTTAAATTCAGATGAGTAGAAT
TGTAGTGTTGTTTCCAATGGTATCTTTATTTATTTTGAATGAATTTGAGA
GAAATTTCGTTATTAGTTGGTTATTTGCGATTGATTATTTTTCAAATACC
ATGGAATGATGGAATACTCACAAAAAGGAAATCAATGATAATGAATTAAA
TTGAATATTTTTAATTGGTAATTTATGGACTTGCAACGAATGAAGTGTTT
AGGTTTTGACTACGGCGTGTCTGGTCAAAATTGTGATAAATGCGCCTCTA
ATGTGTAACACAAAAAAATAATTAATAAAACTGAAAATTCGTAAAACCTA
AAGTTTTTCTGTGAAAGTTATTCATTTGTCAAATTTTTGAATAAGGTGCA
ATACACTGCCATGATTAACGCACTAGATACGAAAGGTGATTTTTTTGAAA
ATTGCTGGGCTTGAAATAACGGTAAGACATTGGATATTGTCCGACCCAAA
ATGCTCCTTGTCCGACCCAAATTGCTCCTTGTCCGACCCAAAAATCATAA
TTTTCAAACTAAAGAAAAAACTCTGATCGGACATTTTGTCCGACCGACGA
AATCGTTATTTCAATCCTTGAAATTGAGTTGCAGTTTTTTAAAAATTAAT
TATAATTTGTTTCCTTCCTAATTTTTAATAGCAAACAACTCAATAATTAC
ATAAAGTGCATCCATTAAAATGAAATAGAATTTGAAATATAGTAAAACCC
TTGAAATTTTTTTAACGAGATTATATTGGTTTTTATTAAGGCAAATGTGA
AAAATTGGTCGTTGTATTCAAAATTATGAAGACTTTTTCTTTAAAATGAA
TCCTTTTAATCATTTGGTATGGACGCACTGTTTAATTTGTAGATATTACT
ANTATTGGTTTTTATTAAGACAAATGTGAAACATTGGTCGTGGTATTTTA
AATTATAAGGTCTTTTTCTTTAAAATGAATCCTTTTAATCATTTGGTATG
GACGCACTGTTCAATTTGTAGATATTACTGCGAGTTACCGTTTATGTTTG
TATTTTTGGCTTTTCTTTTTTTAGCCAGAAGGGAGTATAGTTATTAATTT
TGATCAATTCTAATGAATTAAATTTGGCATAAATATCATCTAGTTTTGTC
TTGAAGATTGTATTTGTCTTAGGGAAAAACATTTCGTTTGTAGATTTTTT
GCGCTATAAGCGAATTTAGCTCTATTTTTTTCTTTATTATCTTTTTTATG
TTTCTTAATTTTTGTATAGTAGAATAATAATATGAGACTTTTCCCTAAAT
TATGCTGCGCCTTATGTACTTTCATTTAAAACTCTTTCCCTA

Coding sequence (CDS) from alignment at scaffold_311:645041..656682-

>TCONS_00058538 ID=TCONS_00058538|Name=TCONS_00058538|organism=Clytia hemisphaerica|type=CDS|length=6504bp|location=Sequence derived from alignment at scaffold_311:645041..656682- (Clytia hemisphaerica)
CACACAAGCATCAACAAATCCATCAACGACGAATAACAGCGGTGGCGGTG
GAAATTGGGTCACTTTTTAACAGGTGGTAATATTGGTTTCCTACCGCCTC
CACCCGGAGGAAACACACCTAAACTGGTGCCTCCGCCCGTAGGAGGTGTA
CCACACGCACGATCAGCGACACAGCCTGCACAACAAGATCCATTTACGAA
CGACCCATTCACGCAACAACCAGCAACACAGACTCAACAACAACCTAAAA
GTACATCCGATTGGGGTGATTTCTCATCGTTCGGCCCATCAAAAATAAAT
CAGGACAAGATTCAAGGCCAAAACCTAAAGCACAAGACGCGAAAAATTGG
AGGATGAAATTTCCAAAGAAGAGAAAAAGCCACAGAAACATGTTGACATG
AGTTTCAAAGAAGGACAAACCATCAAAATTAACTTCGGGGAAGGCATGCA
TTCATTGGAATGGGTTTCAGTGATCGTGGTGATTCTTTTGATTTCAATGT
TTCTCTTCAAGACCATTTCAAGTCAGCTGTTTGCTAAGGCACCAATCGAT
GAATATCCAGGTCCAACAGTTGAAGCAGTATCTGACAGTAGTCGATATTT
CGTTATCAAAATACAAGAAGACGGAGGGCTGCAGATTGGAAGCTAGAACA
ACCAGACTGGACAGTTCGAATGAGGATTGTGGAAATGAATGGTAGATGTA
TTTTGAATTTCGAAGATAAAATGTCAGATGACTGATTATGAAAGAATACT
GTGTGTTAAAAATGAAGTTTTTATGTACAAGATACCCCCAAGGAATAGTG
CAAGAGGATATAGCACACAAGCATCAACAAATCCATCAACGACGAATAAC
AGCGGTGGCGGTGGAAATTGGGTCACTTTTTAACAGGTGGTAATATTGGT
TTCCTACCGCCTCCACCCGGAGGAAACACACCTAAACTGGTGCCTCCGCC
CGTAGGAGGTGTACCACACGCACGATCAGCGACACAGCCTGCACAACAAG
ATCCATTTACGAACGACCCATTCACGCAACAACCAGCAACACAGACTCAA
CAACAACCTAAAAGTACATCCGATTGGGGTGATTTCTCATCGTTCGGCCC
ATCAAAAATAAATCAGGACAAGATTCAAGGCCAAAACCTAAAGCACAAGA
CGCGAAAAATTGGAGGATGAAATTTCCAAAGAAGAGAAAAAGCCACAGAA
ACATGTTGACATGAGTTTCAAAGAAGGACAAACCATCAAAATTAACTTCG
GGGAAGGCATGCATTCATTGGAATGGGTTTCAGTGATCGTGGTGATTCTT
TTGATTTCAATGTTTCTCTTCAAGACCATTTCAAGTCAGCTGTTTGCTAA
GGCACCAATCGATGAATATCCAGGTCCAACAGTTGAAGCAGTATCTGACA
GTAGTCGATATTTCGTTATCAAAATACAAGAAGACGGAGGGCTGCAGATT
GGAAGCTAGAACAACCAGACTGGACAGTTCGAATGAGGATTGTGGAAATG
AATGGTAGATGTATTTTGAATTTCGAAGATAAAATGTCAGATGACTGATT
ATGAAAGAATACTGTGTGTTAAAAATGAAGTTTTTATGTACAAGATACCC
CCAAGGAATAGTGCAAGAGGATATAGCACACAAGCATCAACAAATCCATC
AACGACGAATAACAGCGGTGGCGGTGGAAATTGGGTCACTTTTTAACAGG
TGGTAATATTGGTTTCCTACCGCCTCCACCCGGAGGAAACACACCTAAAC
TGGTGCCTCCGCCCGTAGGAGGTGTACCACACGCACGATCAGCGACACAG
CCTGCACAACAAGATCCATTTACGAACGACCCATTCACGCAACAACCAGC
AACACAGACTCAACAACAACCTAAAAGTACATCCGATTGGGGTGATTTCT
CATCGTTCGGCCCATCAAAAATAAATCAGGACAAGATTCAAGGCCAAAAC
CTAAAGCACAAGACGCGAAAAATTGGAGGATGAAATTTCCAAAGAAGAGA
AAAAGCCACAGAAACATGTTGACATGAGTTTCAAAGAAGGACAAACCATC
AAAATTAACTTCGGGGAAGGCATGCATTCATTGGAATGGGTTTCAGTGAT
CGTGGTGATTCTTTTGATTTCAATGTTTCTCTTCAAGACCATTTCAAGTC
AGCTGTTTGCTAAGGCACCAATCGATGAATATCCAGGTCCAACAGTTGAA
GCAGTATCTGACAGTAGTCGATATTTCGTTATCAAAATACAAGAAGACGG
AGGGCTGCAGATTGGAAGCTAGAACAACCAGACTGGACAGTTCGAATGAG
GATTGTGGAAATGAATGGTAGATGTATTTTGAATTTCGAAGATAAAATGT
CAGATGACTGATTATGAAAGAATACTGTGTGTTAAAAATGAAGTTTTTAT
GTACAAGATACCCCCAAGGAATAGTGCAAGAGGATATAGCACACAAGCAT
CAACAAATCCATCAACGACGAATAACAGCGGTGGCGGTGGAAATTGGGTC
ACTTTTTAACAGGTGGTAATATTGGTTTCCTACCGCCTCCACCCGGAGGA
AACACACCTAAACTGGTGCCTCCGCCCGTAGGAGGTGTACCACACGCACG
ATCAGCGACACAGCCTGCACAACAAGATCCATTTACGAACGACCCATTCA
CGCAACAACCAGCAACACAGACTCAACAACAACCTAAAAGTACATCCGAT
TGGGGTGATTTCTCATCGTTCGGCCCATCAAAAATAAATCAGGACAAGAT
TCAAGGCCAAAACCTAAAGCACAAGACGCGAAAAATTGGAGGATGAAATT
TCCAAAGAAGAGAAAAAGCCACAGAAACATGTTGACATGAGTTTCAAAGA
AGGACAAACCATCAAAATTAACTTCGGGGAAGGCATGCATTCATTGGAAT
GGGTTTCAGTGATCGTGGTGATTCTTTTGATTTCAATGTTTCTCTTCAAG
ACCATTTCAAGTCAGCTGTTTGCTAAGGCACCAATCGATGAATATCCAGG
TCCAACAGTTGAAGCAGTATCTGACAGTAGTCGATATTTCGTTATCAAAA
TACAAGAAGACGGAGGGCTGCAGATTGGAAGCTAGAACAACCAGACTGGA
CAGTTCGAATGAGGATTGTGGAAATGAATGGTAGATGTATTTTGAATTTC
GAAGATAAAATGTCAGATGACTGATTATGAAAGAATACTGTGTGTTAAAA
ATGAAGTTTTTATGTACAAGATACCCCCAAGGAATAGTGCAAGAGGATAT
AGCACACAAGCATCAACAAATCCATCAACGACGAATAACAGCGGTGGCGG
TGGAAATTGGGTCACTTTTTAACAGGTGGTAATATTGGTTTCCTACCGCC
TCCACCCGGAGGAAACACACCTAAACTGGTGCCTCCGCCCGTAGGAGGTG
TACCACACGCACGATCAGCGACACAGCCTGCACAACAAGATCCATTTACG
AACGACCCATTCACGCAACAACCAGCAACACAGACTCAACAACAACCTAA
AAGTACATCCGATTGGGGTGATTTCTCATCGTTCGGCCCATCAAAAATAA
ATCAGGACAAGATTCAAGGCCAAAACCTAAAGCACAAGACGCGAAAAATT
GGAGGATGAAATTTCCAAAGAAGAGAAAAAGCCACAGAAACATGTTGACA
TGAGTTTCAAAGAAGGACAAACCATCAAAATTAACTTCGGGGAAGGCATG
CATTCATTGGAATGGGTTTCAGTGATCGTGGTGATTCTTTTGATTTCAAT
GTTTCTCTTCAAGACCATTTCAAGTCAGCTGTTTGCTAAGGCACCAATCG
ATGAATATCCAGGTCCAACAGTTGAAGCAGTATCTGACAGTAGTCGATAT
TTCGTTATCAAAATACAAGAAGACGGAGGGCTGCAGATTGGAAGCTAGAA
CAACCAGACTGGACAGTTCGAATGAGGATTGTGGAAATGAATGGTAGATG
TATTTTGAATTTCGAAGATAAAATGTCAGATGACTGATTATGAAAGAATA
CTGTGTGTTAAAAATGAAGTTTTTATGTACAAGATACCCCCAAGGAATAG
TGCAAGAGGATATAGCACACAAGCATCAACAAATCCATCAACGACGAATA
ACAGCGGTGGCGGTGGAAATTGGGTCACTTTTTAACAGGTGGTAATATTG
GTTTCCTACCGCCTCCACCCGGAGGAAACACACCTAAACTGGTGCCTCCG
CCCGTAGGAGGTGTACCACACGCACGATCAGCGACACAGCCTGCACAACA
AGATCCATTTACGAACGACCCATTCACGCAACAACCAGCAACACAGACTC
AACAACAACCTAAAAGTACATCCGATTGGGGTGATTTCTCATCGTTCGGC
CCATCAAAAATAAATCAGGACAAGATTCAAGGCCAAAACCTAAAGCACAA
GACGCGAAAAATTGGAGGATGAAATTTCCAAAGAAGAGAAAAAGCCACAG
AAACATGTTGACATGAGTTTCAAAGAAGGACAAACCATCAAAATTAACTT
CGGGGAAGGCATGCATTCATTGGAATGGGTTTCAGTGATCGTGGTGATTC
TTTTGATTTCAATGTTTCTCTTCAAGACCATTTCAAGTCAGCTGTTTGCT
AAGGCACCAATCGATGAATATCCAGGTCCAACAGTTGAAGCAGTATCTGA
CAGTAGTCGATATTTCGTTATCAAAATACAAGAAGACGGAGGGCTGCAGA
TTGGAAGCTAGAACAACCAGACTGGACAGTTCGAATGAGGATTGTGGAAA
TGAATGGTAGATGTATTTTGAATTTCGAAGATAAAATGTCAGATGACTGA
TTATGAAAGAATACTGTGTGTTAAAAATGAAGTTTTTATGTACAAGATAC
CCCCAAGGAATAGTGCAAGAGGATATAGCACACAAGCATCAACAAATCCA
TCAACGACGAATAACAGCGGTGGCGGTGGAAATTGGGTCACTTTTTAACA
GGTGGTAATATTGGTTTCCTACCGCCTCCACCCGGAGGAAACACACCTAA
ACTGGTGCCTCCGCCCGTAGGAGGTGTACCACACGCACGATCAGCGACAC
AGCCTGCACAACAAGATCCATTTACGAACGACCCATTCACGCAACAACCA
GCAACACAGACTCAACAACAACCTAAAAGTACATCCGATTGGGGTGATTT
CTCATCGTTCGGCCCATCAAAAATAAATCAGGACAAGATTCAAGGCCAAA
ACCTAAAGCACAAGACGCGAAAAATTGGAGGATGAAATTTCCAAAGAAGA
GAAAAAGCCACAGAAACATGTTGACATGAGTTTCAAAGAAGGACAAACCA
TCAAAATTAACTTCGGGGAAGGCATGCATTCATTGGAATGGGTTTCAGTG
ATCGTGGTGATTCTTTTGATTTCAATGTTTCTCTTCAAGACCATTTCAAG
TCAGCTGTTTGCTAAGGCACCAATCGATGAATATCCAGGTCCAACAGTTG
AAGCAGTATCTGACAGTAGTCGATATTTCGTTATCAAAATACAAGAAGAC
GGAGGGCTGCAGATTGGAAGCTAGAACAACCAGACTGGACAGTTCGAATG
AGGATTGTGGAAATGAATGGTAGATGTATTTTGAATTTCGAAGATAAAAT
GTCAGATGACTGATTATGAAAGAATACTGTGTGTTAAAAATGAAGTTTTT
ATGTACAAGATACCCCCAAGGAATAGTGCAAGAGGATATAGCACACAAGC
ATCAACAAATCCATCAACGACGAATAACAGCGGTGGCGGTGGAAATTGGG
TCACTTTTTAACAGGTGGTAATATTGGTTTCCTACCGCCTCCACCCGGAG
GAAACACACCTAAACTGGTGCCTCCGCCCGTAGGAGGTGTACCACACGCA
CGATCAGCGACACAGCCTGCACAACAAGATCCATTTACGAACGACCCATT
CACGCAACAACCAGCAACACAGACTCAACAACAACCTAAAAGTACATCCG
ATTGGGGTGATTTCTCATCGTTCGGCCCATCAAAAATAAATCAGGACAAG
ATTCAAGGCCAAAACCTAAAGCACAAGACGCGAAAAATTGGAGGATGAAA
TTTCCAAAGAAGAGAAAAAGCCACAGAAACATGTTGACATGAGTTTCAAA
GAAGGACAAACCATCAAAATTAACTTCGGGGAAGGCATGCATTCATTGGA
ATGGGTTTCAGTGATCGTGGTGATTCTTTTGATTTCAATGTTTCTCTTCA
AGACCATTTCAAGTCAGCTGTTTGCTAAGGCACCAATCGATGAATATCCA
GGTCCAACAGTTGAAGCAGTATCTGACAGTAGTCGATATTTCGTTATCAA
AATACAAGAAGACGGAGGGCTGCAGATTGGAAGCTAGAACAACCAGACTG
GACAGTTCGAATGAGGATTGTGGAAATGAATGGTAGATGTATTTTGAATT
TCGAAGATAAAATGTCAGATGACTGATTATGAAAGAATACTGTGTGTTAA
AAATGAAGTTTTTATGTACAAGATACCCCCAAGGAATAGTGCAAGAGGAT
ATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036876XLOC_036876Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058538-exon-scaffold_311-1575043694:655975..656682TCONS_00058538-exon-scaffold_311-1575043694:655975..656682Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1575043694:649562..649662TCONS_00058538-exon-scaffold_311-1575043694:649562..649662Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1575043694:648922..649026TCONS_00058538-exon-scaffold_311-1575043694:648922..649026Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1575043694:648311..648392TCONS_00058538-exon-scaffold_311-1575043694:648311..648392Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1575043694:647853..647955TCONS_00058538-exon-scaffold_311-1575043694:647853..647955Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1575043694:647631..647673TCONS_00058538-exon-scaffold_311-1575043694:647631..647673Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1575043694:646986..647208TCONS_00058538-exon-scaffold_311-1575043694:646986..647208Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1575043694:645041..646419TCONS_00058538-exon-scaffold_311-1575043694:645041..646419Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:655975..656682TCONS_00058538-exon-scaffold_311-1510915933:655975..656682Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:649562..649662TCONS_00058538-exon-scaffold_311-1510915933:649562..649662Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:648922..649026TCONS_00058538-exon-scaffold_311-1510915933:648922..649026Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:648311..648392TCONS_00058538-exon-scaffold_311-1510915933:648311..648392Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:647853..647955TCONS_00058538-exon-scaffold_311-1510915933:647853..647955Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:647631..647673TCONS_00058538-exon-scaffold_311-1510915933:647631..647673Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:646986..647208TCONS_00058538-exon-scaffold_311-1510915933:646986..647208Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1510915933:645041..646419TCONS_00058538-exon-scaffold_311-1510915933:645041..646419Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:655975..656682TCONS_00058538-exon-scaffold_311-1491911889:655975..656682Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:649562..649662TCONS_00058538-exon-scaffold_311-1491911889:649562..649662Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:648922..649026TCONS_00058538-exon-scaffold_311-1491911889:648922..649026Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:648311..648392TCONS_00058538-exon-scaffold_311-1491911889:648311..648392Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:647853..647955TCONS_00058538-exon-scaffold_311-1491911889:647853..647955Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:647631..647673TCONS_00058538-exon-scaffold_311-1491911889:647631..647673Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:646986..647208TCONS_00058538-exon-scaffold_311-1491911889:646986..647208Clytia hemisphaericaexon
TCONS_00058538-exon-scaffold_311-1491911889:645041..646419TCONS_00058538-exon-scaffold_311-1491911889:645041..646419Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058538-proteinTCONS_00058538-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_311supercontigscaffold_311:645041..656682 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
55.0533	59.0865	27.4501	26.3615	16.5897	13.4094	30.9348	32.3791	37.5147	39.5411	31.2073	34.2082	21.3609	21.6066	21.01	22.9678	28.8876	25.6755	19.7016	24.9651	24.8908	25.7075	31.9843	35.1132	20.248	22.6294	38.381	29.913	34.6936	32.0312
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH_dom-like
IPR012466NECAP_PHear
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006897 endocytosis
cellular_component GO:0016020 membrane
Blast
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BLAST of TCONS_00058538 vs. Swiss-Prot (Human)
Match: NECP1 (Adaptin ear-binding coat-associated protein 1 OS=Homo sapiens GN=NECAP1 PE=1 SV=2)

HSP 1 Score: 230.335 bits (586), Expect = 3.170e-68
Identity = 113/190 (59.47%), Postives = 140/190 (73.68%), Query Frame = 2 
Query:  629 DYERILCVKNEVFMYKIPPRNSARGYRAADWKLEQPDWTVRMRIVEMNGRCILNFEDKMSGQLFAKAPIDEYPGPTVEAVSDSSRYFVIKIQEDGGRHAFIGMGFSDRGDSFDFNVSLQDHFKREKLEDEISKE--EKKPQKHVDMSFKEGQTIKI---NFGNKSGQDSRPKPKAQAGGNIGFLPPPPGG 1183
            +YE +LCVK +V +Y+IPPR S RGYRA+DWKL+QPDWT R+RI        +  EDK+SG+LFA+AP+++YPG  VE V+DSSRYFVI+IQ+  GR AFIG+GF+DRGD+FDFNVSLQDHFK  K E EISKE  E   +  +D+ FKEGQTIK+   N  NK G  S  KP+   GG +  LPPPPGG
Sbjct:    6 EYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDLGFKEGQTIKLCIGNITNKKGGAS--KPRTARGGGLSLLPPPPGG 193
The following BLAST results are available for this feature:
BLAST of TCONS_00058538 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NECP13.170e-6859.47Adaptin ear-binding coat-associated protein 1 OS=H... [more]
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