TCONS_00058538-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00058538-protein
Unique NameTCONS_00058538-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length270

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00058538-protein ID=TCONS_00058538-protein|Name=TCONS_00058538-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
MTDYERILCVKNEVFMYKIPPRNSARGYRAADWKLEQPDWTVRMRIVEMN
GRCILNFEDKMSGQLFAKAPIDEYPGPTVEAVSDSSRYFVIKIQEDGGRH
AFIGMGFSDRGDSFDFNVSLQDHFKREKLEDEISKEEKKPQKHVDMSFKE
GQTIKINFGNKSGQDSRPKPKAQAGGNIGFLPPPPGGNTPKLVPPPVGGV
PHARSATQPAQQDPFTNDPFTQQPATQTQQQPKSTSDWGDFSSFGPSNTQ
ASTNPSTTNNSGGGGNWVTF
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_036876XLOC_036876Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00058538TCONS_00058538Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011993PH_dom-like
IPR012466NECAP_PHear
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006897 endocytosis
cellular_component GO:0016020 membrane
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011993PH domain-likeGENE3D2.30.29.30coord: 8..130
e-value: 5.8E-49
score: 164.6
IPR011993PH domain-likeSUPERFAMILY50729PH domain-likecoord: 2..128
IPR012466NECAP, PHear domainPFAMPF07933DUF1681coord: 4..158
e-value: 5.6E-54
score: 181.8
IPR012466NECAP, PHear domainCDDcd13228PHear_NECAPcoord: 6..125
e-value: 9.07058E-74
score: 222.816
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..270

Blast
[Close]
BLAST of TCONS_00058538-protein vs. Swiss-Prot (Human)
Match: NECP1 (Adaptin ear-binding coat-associated protein 1 OS=Homo sapiens GN=NECAP1 PE=1 SV=2)

HSP 1 Score: 243.432 bits (620), Expect = 2.097e-80
Identity = 134/281 (47.69%), Postives = 169/281 (60.14%), Query Frame = 0 
Query:    3 DYERILCVKNEVFMYKIPPRNSARGYRAADWKLEQPDWTVRMRIVEMNGRCILNFEDKMSGQLFAKAPIDEYPGPTVEAVSDSSRYFVIKIQEDGGRHAFIGMGFSDRGDSFDFNVSLQDHFKREKLEDEISKE--EKKPQKHVDMSFKEGQTIKINFGNKSGQD-SRPKPKAQAGGNIGFLPPPPGGNTPKLVPPPVGGVPHARSATQP--------AQQDPFTNDPFTQQPATQTQQQPKSTSD--WGDFSSFGPSNTQASTNPSTTNNSGGGGNWVTF 270
            +YE +LCVK +V +Y+IPPR S RGYRA+DWKL+QPDWT R+RI        +  EDK+SG+LFA+AP+++YPG  VE V+DSSRYFVI+IQ+  GR AFIG+GF+DRGD+FDFNVSLQDHFK  K E EISKE  E   +  +D+ FKEGQTIK+  GN + +     KP+   GG +  LPPPPGG     +PPP   V  +   T P                D  +  P T     P S S+  WGDFS+   S    +  PS         NWV F
Sbjct:    6 EYESVLCVKPDVSVYRIPPRASNRGYRASDWKLDQPDWTGRLRITSKGKTAYIKLEDKVSGELFAQAPVEQYPGIAVETVTDSSRYFVIRIQDGTGRSAFIGIGFTDRGDAFDFNVSLQDHFKWVKQESEISKESQEMDARPKLDLGFKEGQTIKLCIGNITNKKGGASKPRTARGGGLSLLPPPPGGKV--TIPPPSSSVAISNHVTPPPIPKSNHGGSDADILLDLDSPAPVTTPAPTPVSVSNDLWGDFSTASSSVPNQAPQPS---------NWVQF 275
The following BLAST results are available for this feature:
BLAST of TCONS_00058538-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NECP12.097e-8047.69Adaptin ear-binding coat-associated protein 1 OS=H... [more]
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