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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058470 ID=TCONS_00058470|Name=TCONS_00058470|organism=Clytia hemisphaerica|type=transcript|length=832bp
TGCCGAGGCACGGCAGCGAAACCTGGCTACTCTCGTGCTTGGTTTACgtc
atcttttggtctttttgTTTCGTGTCTCTTTTGTCTCGTTTTCTGTTGCT
CTtggtttcctttgtttttgtgtCATTCATTTTGTCTTGAGAATTACGTT
CCGTTTATTTTACgcattttcttttattaaagTAATTAATTTGTACATAC
GGTAATTATCTAGTAATTAATATAAAAACTAGAAGTTGTCAGTAGAAATC
ATTCATTCACGTCTGAATACTGTAAGAGAGATGTTGAATGATGAAGTGAT
ATAGTTCACAAacgtttttggtatttttgagaCACTTGATTGAATGTGAC
TGCTGACGGCCTCCAGCCCTAAAACATTGTTAATTTACCTATCGTTTCAA
TATACCGTTTATCGGAGCGATTGAGTATCAATTTCCTGTCCTGAGATAAG
TTTCTTCGGCACCAACAGTAAATTAACAATAACGGGGAAGGCCAGTACAA
TGTCAGAAAGTCGTGTCCGAAAATACACCACAAGAATGAAGGAGTTTAAA
GAGAATGAACTCAAGAGCAACGAGCTCAAATCAAGGCGAGATAATGTATA
ATTGTATGCTTAGTAACATAAGCAAAATTTTTGAGTTAATATGGAAGTTA
CCTGAGCTGCAAGTTTAAATGTCATCCAATTTAGTCGATGTGTTCTCTTC
TTAATTTGATCATGTAAAGCCCTGAGATTATGGTATTCTCGAACTCCCAG
AGTTGTACCACACGGATCCAACTGATCGAGTGTTTGTCCAGCTAAAAGGA
AAGGAGACCTTacaatttcaatcatttttttg Run BLAST on NCBI transcript from alignment at scaffold_311:936235..937225+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058470 ID=TCONS_00058470|Name=TCONS_00058470|organism=Clytia hemisphaerica|type=transcript|length=991bp|location=Sequence derived from alignment at scaffold_311:936235..937225+ (Clytia hemisphaerica)
TGCCGAGGCACGGCAGCGAAACCTGGCTACTCTCGTGCTTGGTTTACgtc
atcttttggtctttttgTTTCGTGTCTCTTTTGTCTCGTTTTCTGTTGCT
CTtggtttcctttgtttttgtgtCATTCATTTTGTCTTGAGAATTACGTT
CCGTTTATTTTACgcattttcttttattaaagTAATTAATTTGTACATAC
GGTAATTATCTAGTAATTAATATAAAAACTAGAAGTTGTCAGTAGAAATC
ATTCATTCACGTCTGAATACTGTAAGAGAGATGTTGAATGATGAAGTGAT
ATAGTTCACAAacgtttttggtatttttgagaCACTTGATTGAATGTGAC
TGCTGACGGCCTCCAGCCCTAAAACATTGTTAATTTAGTAAGtatatttt
atttgtttagCATTTGTTTATTAGATTTCAGTTTAGTTCATTTGTTTCTT
TGAGTGCCTTTTTTCTGTTCTACAGTACCTGGGATAAGAGATTTTCTATA
GCTTTGTACATTTTTTCTAAAgtagttttgtatttttttgttctaGCCTA
TCGTTTCAATATACCGTTTATCGGAGCGATTGAGTATCAATTTCCTGTCC
TGAGATAAGTTTCTTCGGCACCAACAGTAAATTAACAATAACGGGGAAGG
CCAGTACAATGTCAGAAAGTCGTGTCCGAAAATACACCACAAGAATGAAG
GAGTTTAAAGAGAATGAACTCAAGAGCAACGAGCTCAAATCAAGGCGAGA
TAATGTATAATTGTATGCTTAGTAACATAAGCAAAATTTTTGAGTTAATA
TGGAAGTTACCTGAGCTGCAAGTTTAAATGTCATCCAATTTAGTCGATGT
GTTCTCTTCTTAATTTGATCATGTAAAGCCCTGAGATTATGGTATTCTCG
AACTCCCAGAGTTGTACCACACGGATCCAACTGATCGAGTGTTTGTCCAG
CTAAAAGGAAAGGAGACCTTacaatttcaatcatttttttg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058470-exon-scaffold_311-1491911889:936235..936621 | TCONS_00058470-exon-scaffold_311-1491911889:936235..936621 | Clytia hemisphaerica | exon |
| TCONS_00058470-exon-scaffold_311-1510915933:936235..936621 | TCONS_00058470-exon-scaffold_311-1510915933:936235..936621 | Clytia hemisphaerica | exon |
| TCONS_00058470-exon-scaffold_311-1575043694:936235..936621 | TCONS_00058470-exon-scaffold_311-1575043694:936235..936621 | Clytia hemisphaerica | exon |
| TCONS_00058470-exon-scaffold_311-1491911889:936781..937225 | TCONS_00058470-exon-scaffold_311-1491911889:936781..937225 | Clytia hemisphaerica | exon |
| TCONS_00058470-exon-scaffold_311-1510915933:936781..937225 | TCONS_00058470-exon-scaffold_311-1510915933:936781..937225 | Clytia hemisphaerica | exon |
| TCONS_00058470-exon-scaffold_311-1575043694:936781..937225 | TCONS_00058470-exon-scaffold_311-1575043694:936781..937225 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_311 | supercontig | scaffold_311:936235..937225 + |
Blast
The following BLAST results are available for this feature:
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