TCONS_00058290 (transcript) - C. hemisphaerica

Overview
NameTCONS_00058290
Unique NameTCONS_00058290
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1741

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00058290 ID=TCONS_00058290|Name=TCONS_00058290|organism=Clytia hemisphaerica|type=transcript|length=1741bp
TCTAGTTCATATTCTTTTACTTATAGGGAAGAGAAAcacaatgaaaaaat
aaaattacaaatagaaaaatgaaagaaatgctATTCAAATTATGGTGTGT
GGCTTCTATCATATCGCTTGCCAATGGGATTGTATTCCAGCATCATAATT
ATGTTCAAATGCAAGATTATCTACACAAAATTCACCAGAGATGTCAGAAT
ATTACACGACTTTACAGCATTGGGAAGTCCATACGAGGACGTGACTTGTT
GGTGATGGAGATAACAGAAAAACCTGGTGTTTATGTCTCCTTGAAACCTA
ATTTCAAATACATTGGTAATATGCATGGGAACGAGGTTTTAGGTCGTGAA
CTATTACTCTTTTTATTGGAACACTTGTGTGACGGTTATACAAATGGTGA
TGCtgaaattatttatttattgcaAACGATTCGCATTCACATTATGCCTT
CCATGAATCCTGATGGGTATGAAAGAGCACGCGAGGGCGATTGTCAAGGC
GTAGGTGGGCGTACAAATGCTAATAACTACGATTTGAACAGgaattttcc
aGATTATTTTCACGGTACAAATCGGATCATTCAAAAAGAGACGGACTTAG
TGATGAAATGGATCAAACAATATCCATTCGTATTATCAGCAAACTTCCAC
GGCGGAGCTTCTGTTGTCAATTATCCATATGATTCTTCAACAACTCATCC
TCATATTCGTGGATACAGTGTTTCACCAGATGATGATATATTTCGTTCCA
TTTCTAAAGTTTATTCCTACAGTCACCCAGACATGTTTAAAGGCTATCCA
GTATGCAATGACCCGTTTACAGATGGAATAACAAATGGTGCCGAATGGTA
TCCGATTACTGGTGGTATGCAAGACTACAATTATATGTACACAAATGCGT
TTGAAGTATTAGTAGAAATGGCTTGTTGCAAGTATCCATTGGCTGCCAAA
CTACCACAGCTCTGGCAAGACCACAAAAGACCTTTAATCAATTACATGCG
GCTGGTTCATTCCGGTGTCAAAGGCACTGTCAAGCTTGAAGATGGTAGTG
AAGTTGTTGGTGCCAAAATCGATGTCTCCTGGTCGCTGGGATCACCAAAG
AAACGTAAGACCATCACCACTACTAAAGGCGGTGATTACTACAGAATTCT
ATTGAAAGGTGTGTATGATTTAACGGTAACTGTTGGTCAAAACAAGCTCA
AAACCTCTATAGATATTAAAAAGGGACAAGTTCTCAGGCAGGATTTCATT
GTGAAGATCAACCAACAGATTGAAGCATTACCGCCTAAAATTATTAAAGT
CAAATCCGTGTTTCCCCAACGGGCACCTGTGAAGAAGACTACATTCATGC
ACGTTTCACATGGTACTACAATGGCAATCATTTTCGGATCAGTTGGTTTG
ATCTTGGTTAGTTTGACTGGTTTTATGGTGTTCTTTTATCTGAAGCGTCG
CCGCGACAGAATGAATGGCTCGCCGGACGATTCTAAAGCGTTCTACGTCA
CCAGTACCGAATCCATTTATTAGCGGTGGCGTAGCATTATGGGTATTCTT
TGTTTTTGGGGTTGAACCTTTCCTATCCCCTGGTTGTGAGGGGTCcgttt
ccgttccaaggggtaAGGTAGGTTAAGGGTGAAATGTAGTGGATTTCTAT
AAGGGTGATTTTCTGAATCTTCAAAAATCACCATTCATTAAAACGATAGG
TAATTATTTAGGacttacagttgacgctctctaattcgtcG
Run BLAST on NCBI

protein sequence of TCONS_00058290-protein

>TCONS_00058290-protein ID=TCONS_00058290-protein|Name=TCONS_00058290-protein|organism=Clytia hemisphaerica|type=polypeptide|length=484bp
MKEMLFKLWCVASIISLANGIVFQHHNYVQMQDYLHKIHQRCQNITRLYS
IGKSIRGRDLLVMEITEKPGVYVSLKPNFKYIGNMHGNEVLGRELLLFLL
EHLCDGYTNGDAEIIYLLQTIRIHIMPSMNPDGYERAREGDCQGVGGRTN
ANNYDLNRNFPDYFHGTNRIIQKETDLVMKWIKQYPFVLSANFHGGASVV
NYPYDSSTTHPHIRGYSVSPDDDIFRSISKVYSYSHPDMFKGYPVCNDPF
TDGITNGAEWYPITGGMQDYNYMYTNAFEVLVEMACCKYPLAAKLPQLWQ
DHKRPLINYMRLVHSGVKGTVKLEDGSEVVGAKIDVSWSLGSPKKRKTIT
TTKGGDYYRILLKGVYDLTVTVGQNKLKTSIDIKKGQVLRQDFIVKINQQ
IEALPPKIIKVKSVFPQRAPVKKTTFMHVSHGTTMAIIFGSVGLILVSLT
GFMVFFYLKRRRDRMNGSPDDSKAFYVTSTESIY
Run BLAST on NCBI

transcript from alignment at scaffold_309:416544..422604-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00058290 ID=TCONS_00058290|Name=TCONS_00058290|organism=Clytia hemisphaerica|type=transcript|length=6061bp|location=Sequence derived from alignment at scaffold_309:416544..422604- (Clytia hemisphaerica)
TCTAGTTCATATTCTTTTACTTATAGGGAAGAGAAACACAATGAAAAAAT
AAAATTACAAATAGAAAAATGAAAGAAATGCTATTCAAATTATGGTGTGT
GGCTTCTATCATATCGCTTGCCAATGGGATTGTATTCCAGCATCATAATT
ATGTTCAAATGCAAGATTATCTACACAAAATTCACCAGAGATGTCAGAAT
ATTACACGACTTTACAGCATTGGGAAGTCCATACGAGGACGTGACTTGTT
GGTGATGGAGATAACAGAAAAACCTGGTGTTTATGTCTCCTTGAAACCTA
ATTTCAAATACATTGGTAATATGCATGGGAACGAGGTTTGAGATTCTCAT
TTTCATTTTCTCTCTTGTGTAGAATTTATGGAGCTTTATACAAACCCTGG
AAGCACTTTTTCGATCATGGCCAACCAAAGTCTTTGGTCAAAGTTTTTTG
AAAGTGGTACTCTAATGGTAGCACTACTCAATAGCGATGTAAATGTAACG
AGAGCGCTAGAGATCTACTTTTCATTGAATACGGGTCACAGATTTCTTTA
AAGCCGGAAGGGCTAGATGTCGTGCTTTAAGCTTTTCCAAGCAAAAAAAA
GTGAATATTGCAAAAAATATTGCTGCTAGCTATTGTTTTCGAAAACCTGC
AAAGCTTCTCATTGGTCAAGCACTGAAATTCTATTTTTACCCAAAGCACG
ACATCTAGCCTTTTGGGGGCTTTATAAAACTATGATACAGGTACCACTTT
CAAAAAAGGGTCAATCAAAATGGCGGTTATAGCTTAATTCATGGTTTTTA
TAAAGGTCAGTGGTGTTAATTAATTGAGAGGCCCTATTTCAAGTTCAAGT
TCAAACTTTAAACATTAAACTTTTCATATCTCTGGGTTTACAAAAGATAT
AGTCGAATGGGATGGTTTAAGAGTCTCCTTTCCTCCCCTGCTATGCAGAC
CTTTTCGGATTGACAGATTGGCACCAGTGGGGAAACTTAAAATCTAATTT
TGCTAGAGGATAGAAATCCAGTGAAAAATTAATATTTNGATTGACAGATT
GGCGTCAGTGGGGAAACTTAAAATCTAATTTTGCTAGAGGACAGAAATCC
AGGGAAAAATTCATTCAATTTTTTTTGGCTTATTGTGCAAACAACTTTAT
TAAAATAGGGTCCATTTTTTTATGTACAATCGGACACCCACGTAGCAAGA
GTTGATTTTTTCCACATTTCCATAGGTTTGATGAGAGATATTTTTATAGG
TTTTAGGTCGTGGAGGCATCTCTGCGGCAAAAAGTGGGCTGTCTAAAGTA
GAGCTTGTTTTTCTAGGTTTTAGGTCGTGAACAATAGAAAAAGTGACGTA
TTGGGTGGAACAAAAACAGAAAAGTTGCATAATTTTGTGAAGTTATTGCA
GTGGTGCACAAGAATAGGCAGGGCAAAAAGTGGGCCGTCTAAACTAGAGC
TTATTTTTCTAGGTTTTAGGTCGTGAACTATTACTCTTTTTATTGGAACA
CTTGTGTGACGGTTATACAAATGGTGATGCTGAAATTATTTATTTATTGC
AAACGATTCGCATTCACATTATGCCTTCCATGAATCCTGATGGGTATGAA
AGAGCACGCGAGGGCGATTGTCAAGGCGTAGGTGGGCGTACAAATGCTAA
TAACTACGATTTGAACAGGTAATCGGCGACTATTTGAAGAACAACCAGTA
GCATACACGTTTTTTATAAGAACATCCATAATTTTTGAAGCCGTCGGATG
TTCTTAACTTTTTGAGTTTTAAGCCTACAAATGTTCTTAATATGTTCTTA
TTTTTCACCATTTTGTGAGTATTTTTATTCAATTTCCTAAGAAAATACAT
GTTTTTGAGTAGTACTCAAAGTCTTAAAAATGTTCTTAACTTGTTCTTAG
TACTCTTGCAAACGAAGTCTTATGTTCTTATAGAAATAACGTTTTTGTTG
TATGACGTATGCCAGCTTGCCCGCTCTCTAGTTAAGTGACGTACATGCCA
AAATATAGTTTTTATAATTTTAGTTATAAGCCGGGGAAAAAATCCTTATT
CTTTATTAACAATAGCGATTTGAAATTCCATCTTTTAATATACAATGAAG
TGAATACACAGTCGCTCTCATGTTGTCTTCCTGATCAGCCACCAGAACCG
TTGGAAAACCAACGGATCCGGCGAGAGTCCAACTCACAACCATGCCATTC
GCGGGCATTTGCTCTGCCATTGAGCTGTGTGGACACGTGGAACCCGAGGA
CTCAATATAGGCCGAACCTTTAATTTATTTTCAGGAATTTTCCAGATTAT
TTTCACGGTACAAATCGGATCATTCAAAAAGAGACGGACTTAGTGATGAA
ATGGATCAAACAATATCCATTCGTATTATCAGCAAACTTCCACGGCGGAG
CTTCTGTTGTCAATTATCCATATGATTCTTCAACAACTCATCCTCATATT
CGTGGATACAGTGTTTCACCAGATGATGATATATTTCGTTCCATTTCTAA
AGTTTATTCCTACAGTCACCCAGACATGTTTAAAGGCTATCCAGTATGCA
ATGACCCGTTTACAGATGGTATTAAAAACTCTCTCTAACTCGAACATTTA
TTATTGGAATCTCTCTGGAATTCGAACTAAAATATTTGTTCCTTCAGCGC
TGAAGTCGCAAAAAATATTCTCCGTAATCTGAATATTTCTATAATCCGAA
GAAAAAAATCTTTGTCTCTTGATGTTTGAATTAGAGAAAGAGAGTCGCCT
GTATTTCGTACCATTTCTAAAGTCTTTTCCTATTTTAGAGAAATTCGAAT
AATAGAGGATCAAATTAGAGAGAGTTTCTGTAATTATAATAATGTAACCA
GCCCTATAATTCATGGTTCGGTTCCGCTCCGAATTCGAAACAAAATGAAG
TCAGCATCGCTTTTAACTAATAGAATCGCTTCATTTCATACTTTCTATGA
TGTAAAATGTTTTTCTAGAATTATTCTTTAATTATTTTAGAAATGAGTTT
TAAGACCTAAAACGGGCAAGGGCCCTTTTAATCGGACATGTCCAATATCA
AAATTAGTGTCAGTTGCTAGTTTAGAATTTTAAGGTTGGCCTTTTTCACT
TTTATGTAGACATGATCCTTCTCTGATACAAGAAAAAAGAGCCAATCTCA
AAATTCTAAACAGGAAAAGCAAACAAGTCTCAGTTTTCTCAGAAACTAAT
CATTTGCTTTGATCTTTTTGGCTTATATTTTTTGCTTGAATTTGTTCTTT
GAAGAAATTTCTGTCTAGAATCTTTTTCATTTGAAGAATGCTGTTTTCAT
GAAATAATTTGTTTATCACTTCCTCCATTCCGCTACAGGAATAACAAATG
GTGCCGAATGGTATCCGATTACTGGTGGTATGCAAGACTACAATTATATG
TACACAAATGCGTTTGAAGTATTAGTAGAAATGGCTTGTTGCAAGTATCC
ATTGGCTGCCAAACTACCACAGCTCTGGCAAGACCACAAAAGACCTTTAA
TCAATTACATGCGGCTGGTTCATTCCGGTGTCAAAGGCACTGTCAAGTAA
ATTCCTTAAAAAATTCGGATTACCTTAAGGAAAGAAATTTTGGTGGACTT
GTCTGAAATCCGCCAAATTAAATTCCCGCCAAATTTAATTTTTTGGACCT
ACCCCGGTGGGCTGTAGGTCCTATAAATTAACCTCTGTTCGTTCGTCCGT
TCGTCCGTTCGTCCGTTCGTCCGTTCGTCCGTTCGTTACTAGCTTTTCTC
GGGATTGGTTCATTAGTTTTTCCTAATTTTTGGCACAAAGATGCAAAATG
GTAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAATTCATTTCC
GGCCGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCAGATTTTC
ATCGGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAAAAACATTATT
TGTAGCAATGCCCACCATCAAGCATGGTTTAATTGTCAATAAAAGTGATT
TTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTATTTTCGCCGG
AAAAACGGTATTTCTTGAATTTCTCGAGCTGTACTTTATATTTTTTCATG
AAATTTTGCACACTGATGCAAAATGGCAATACCTAAAATATGACAGAGCC
TGATTTTCAATTAACGTACTTTTCCGGCCGAAAATGCCGGAAATATCCCG
GAAATCGCCGTTTTTGCAGATTTTCATCGGACTTTTTCCTTATATTTCGT
TGTTTTTTCACACAAAAACATTATTTGTAGCAATGCCCACCATCAAGCAT
GGTTTAATTGTCAATAAAAGTGATTTTTGAAGCCGGAACTTTCTAAAAAT
CGCCGGAACAGCCTATTTTCGCCGGAAAAACGGTATTTCTTGAATTTCTC
GAGCTGTACTTTATATTTTTTCATGAAATTTTGCACACTGATGCAAAATG
GCAATACCTAAAATATGACAGAGCCTGATTTTCAATTAACGTACTTTTCC
GGCCGAAAATGCCGGAAATATCCCGGAAATCGCCGTTTTTGCAGATTTTC
ATCGGACTTTTTCCTTATATTTCGTTGTTTTTTCACACAAAAACATTATT
TGTAGCAATGCCCACCATCAAGCATGGTTTAATTGTCAATAAAAGTGATT
TTTGAAGCCGGAACTTTCTAAAAATCGCCGGAACAGCCTATTTTCGCCGG
AAAAACGGTATTTCTTGAATTTCTCGAGCTGTACTTTATATTTTTTCATG
AAATTTTGCACACTGATGCAAAATGGCAATACCTAAAATATGACAGAGCC
TGATTTTCAATTAACGTACTTTTCCGGCCGAAAATGCCGGAAATATCCCG
GAAATCGCCGTTTTTGCAGATTTTCATCGGACTTTTTCCTTATATTTCGT
TGTTTTTTCACACAAAAACATTATTGATAACAATGCTCACCATCAAGCAT
GATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAACTTTCTATTAAT
TTTTCCCTACAACCCTTCCCTCTCCCCCCATCAACAATCAATGATGAATT
TGTTGCGTTATGCATTTTCGCTAAACGATATATTTTCTGACTGATTTTTT
TCTCCTCGCATTGCTATCTAACTTTCATCATCAGGTAGGTCCATTCAGCA
TCTAGCTTGTTTTTCCTTTTTTGTCCAATTTTTCACAATTGATATCTGAT
TTCAATGCTTTAACCCTGATTTTGGATGGATTTTATCCGCCGTATTAAAT
TCTCGCCAAAATTAGCATTTTCCCTGATAGAGATTTTTATATAGTAAAAA
AATCATGATATAATTCCCCATCGATATCTTTTCTCGTTATCTTTGATCAT
CAGGCTTGAAGATGGTAGTGAAGTTGTTGGTGCCAAAATCGATGTCTCCT
GGTCGCTGGGATCACCAAAGAAACGTAAGACCATCACCACTACTAAAGGC
GGTGATTACTACAGAATTCTATTGAAAGGTGTGTATGATTTAACGGTAAC
TGTTGGTCAAAACAAGCTCAAAACCTCTATAGATATTAAAAAGGGACAAG
TTCTCAGGCAGGATTTCATTGTGAAGATCAACCAACAGATTGAAGCATTA
CCGCCTAAAATTATTAAAGTCAAATCCGTGTTTCCCCAACGGGCACCTGT
GAAGAAGACTACATTCATGCACGTTTCACATGGTACTACAATGGCAATCA
TTTTCGGATCAGTTGGTTTGATCTTGGTTAGTTTGACTGGTTTTATGGTG
TTCTTTTATCTGAAGCGTCGCCGCGACAGAATGAATGGCTCGCCGGACGA
TTCTAAAGCGTTCTACGTCACCAGTACCGAATCCATTTATTAGCGGTGGC
GTAGCATTATGGGTATTCTTTGTTTTTGGGGTTGAACCTTTCCTATCCCC
TGGTTGTGAGGGGTCCGTTTCCGTTCCAAGGGGTAAGGTAGGTTAAGGGT
GAAATGTAGTGGATTTCTATAAGGGTGATTTTCTGAATCTTCAAAAATCA
CCATTCATTAAAACGATAGGTAATTATTTAGGACTTACAGTTGACGCTCT
CTAATTCGTCG

Coding sequence (CDS) from alignment at scaffold_309:416544..422604-

>TCONS_00058290 ID=TCONS_00058290|Name=TCONS_00058290|organism=Clytia hemisphaerica|type=CDS|length=7275bp|location=Sequence derived from alignment at scaffold_309:416544..422604- (Clytia hemisphaerica)
GCTTGAAGATGGTAGTGAAGTTGTTGGTGCCAAAATCGATGTCTCCTGGT
CGCTGGGATCACCAAAGAAACGTAAGACCATCACCACTACTAAAGGCGGT
GATTACTACAGAATTCTATTGAAAGGTGTGTATGATTTAACGGTAACTGT
TGGTCAAAACAAGCTCAAAACCTCTATAGATATTAAAAAGGGACAAGTTC
TCAGGCAGGATTTCATTGTGAAGATCAACCAACAGATTGAAGCATTACCG
CCTAAAATTATTAAAGTCAAATCCGTGTTTCCCCAACGGGCACCTGTGAA
GAAGACTACATTCATGCACGTTTCACATGGTACTACAATGGCAATCATTT
TCGGATCAGTTGGTTTGATCTTGGTTAGTTTGACTGGTTTTATGGTGTTC
TTTTATCTGAAGCGTCGCCGCGACAGAATGAATGGCTCGCCGGACGATTC
TAAAGCGTTCTACGTCACCAGTACCGAATCCATTTATTAGGAATAACAAA
TGGTGCCGAATGGTATCCGATTACTGGTGGTATGCAAGACTACAATTATA
TGTACACAAATGCGTTTGAAGTATTAGTAGAAATGGCTTGTTGCAAGTAT
CCATTGGCTGCCAAACTACCACAGCTCTGGCAAGACCACAAAAGACCTTT
AATCAATTACATGCGGCTGGTTCATTCCGGTGTCAAAGGCACTGTCAAGA
ATTTTCCAGATTATTTTCACGGTACAAATCGGATCATTCAAAAAGAGACG
GACTTAGTGATGAAATGGATCAAACAATATCCATTCGTATTATCAGCAAA
CTTCCACGGCGGAGCTTCTGTTGTCAATTATCCATATGATTCTTCAACAA
CTCATCCTCATATTCGTGGATACAGTGTTTCACCAGATGATGATATATTT
CGTTCCATTTCTAAAGTTTATTCCTACAGTCACCCAGACATGTTTAAAGG
CTATCCAGTATGCAATGACCCGTTTACAGATGGTTTTAGGTCGTGAACTA
TTACTCTTTTTATTGGAACACTTGTGTGACGGTTATACAAATGGTGATGC
TGAAATTATTTATTTATTGCAAACGATTCGCATTCACATTATGCCTTCCA
TGAATCCTGATGGGTATGAAAGAGCACGCGAGGGCGATTGTCAAGGCGTA
GGTGGGCGTACAAATGCTAATAACTACGATTTGAACAGATGAAAGAAATG
CTATTCAAATTATGGTGTGTGGCTTCTATCATATCGCTTGCCAATGGGAT
TGTATTCCAGCATCATAATTATGTTCAAATGCAAGATTATCTACACAAAA
TTCACCAGAGATGTCAGAATATTACACGACTTTACAGCATTGGGAAGTCC
ATACGAGGACGTGACTTGTTGGTGATGGAGATAACAGAAAAACCTGGTGT
TTATGTCTCCTTGAAACCTAATTTCAAATACATTGGTAATATGCATGGGA
ACGAGGCTTGAAGATGGTAGTGAAGTTGTTGGTGCCAAAATCGATGTCTC
CTGGTCGCTGGGATCACCAAAGAAACGTAAGACCATCACCACTACTAAAG
GCGGTGATTACTACAGAATTCTATTGAAAGGTGTGTATGATTTAACGGTA
ACTGTTGGTCAAAACAAGCTCAAAACCTCTATAGATATTAAAAAGGGACA
AGTTCTCAGGCAGGATTTCATTGTGAAGATCAACCAACAGATTGAAGCAT
TACCGCCTAAAATTATTAAAGTCAAATCCGTGTTTCCCCAACGGGCACCT
GTGAAGAAGACTACATTCATGCACGTTTCACATGGTACTACAATGGCAAT
CATTTTCGGATCAGTTGGTTTGATCTTGGTTAGTTTGACTGGTTTTATGG
TGTTCTTTTATCTGAAGCGTCGCCGCGACAGAATGAATGGCTCGCCGGAC
GATTCTAAAGCGTTCTACGTCACCAGTACCGAATCCATTTATTAGGAATA
ACAAATGGTGCCGAATGGTATCCGATTACTGGTGGTATGCAAGACTACAA
TTATATGTACACAAATGCGTTTGAAGTATTAGTAGAAATGGCTTGTTGCA
AGTATCCATTGGCTGCCAAACTACCACAGCTCTGGCAAGACCACAAAAGA
CCTTTAATCAATTACATGCGGCTGGTTCATTCCGGTGTCAAAGGCACTGT
CAAGAATTTTCCAGATTATTTTCACGGTACAAATCGGATCATTCAAAAAG
AGACGGACTTAGTGATGAAATGGATCAAACAATATCCATTCGTATTATCA
GCAAACTTCCACGGCGGAGCTTCTGTTGTCAATTATCCATATGATTCTTC
AACAACTCATCCTCATATTCGTGGATACAGTGTTTCACCAGATGATGATA
TATTTCGTTCCATTTCTAAAGTTTATTCCTACAGTCACCCAGACATGTTT
AAAGGCTATCCAGTATGCAATGACCCGTTTACAGATGGTTTTAGGTCGTG
AACTATTACTCTTTTTATTGGAACACTTGTGTGACGGTTATACAAATGGT
GATGCTGAAATTATTTATTTATTGCAAACGATTCGCATTCACATTATGCC
TTCCATGAATCCTGATGGGTATGAAAGAGCACGCGAGGGCGATTGTCAAG
GCGTAGGTGGGCGTACAAATGCTAATAACTACGATTTGAACAGATGAAAG
AAATGCTATTCAAATTATGGTGTGTGGCTTCTATCATATCGCTTGCCAAT
GGGATTGTATTCCAGCATCATAATTATGTTCAAATGCAAGATTATCTACA
CAAAATTCACCAGAGATGTCAGAATATTACACGACTTTACAGCATTGGGA
AGTCCATACGAGGACGTGACTTGTTGGTGATGGAGATAACAGAAAAACCT
GGTGTTTATGTCTCCTTGAAACCTAATTTCAAATACATTGGTAATATGCA
TGGGAACGAGGCTTGAAGATGGTAGTGAAGTTGTTGGTGCCAAAATCGAT
GTCTCCTGGTCGCTGGGATCACCAAAGAAACGTAAGACCATCACCACTAC
TAAAGGCGGTGATTACTACAGAATTCTATTGAAAGGTGTGTATGATTTAA
CGGTAACTGTTGGTCAAAACAAGCTCAAAACCTCTATAGATATTAAAAAG
GGACAAGTTCTCAGGCAGGATTTCATTGTGAAGATCAACCAACAGATTGA
AGCATTACCGCCTAAAATTATTAAAGTCAAATCCGTGTTTCCCCAACGGG
CACCTGTGAAGAAGACTACATTCATGCACGTTTCACATGGTACTACAATG
GCAATCATTTTCGGATCAGTTGGTTTGATCTTGGTTAGTTTGACTGGTTT
TATGGTGTTCTTTTATCTGAAGCGTCGCCGCGACAGAATGAATGGCTCGC
CGGACGATTCTAAAGCGTTCTACGTCACCAGTACCGAATCCATTTATTAG
GAATAACAAATGGTGCCGAATGGTATCCGATTACTGGTGGTATGCAAGAC
TACAATTATATGTACACAAATGCGTTTGAAGTATTAGTAGAAATGGCTTG
TTGCAAGTATCCATTGGCTGCCAAACTACCACAGCTCTGGCAAGACCACA
AAAGACCTTTAATCAATTACATGCGGCTGGTTCATTCCGGTGTCAAAGGC
ACTGTCAAGAATTTTCCAGATTATTTTCACGGTACAAATCGGATCATTCA
AAAAGAGACGGACTTAGTGATGAAATGGATCAAACAATATCCATTCGTAT
TATCAGCAAACTTCCACGGCGGAGCTTCTGTTGTCAATTATCCATATGAT
TCTTCAACAACTCATCCTCATATTCGTGGATACAGTGTTTCACCAGATGA
TGATATATTTCGTTCCATTTCTAAAGTTTATTCCTACAGTCACCCAGACA
TGTTTAAAGGCTATCCAGTATGCAATGACCCGTTTACAGATGGTTTTAGG
TCGTGAACTATTACTCTTTTTATTGGAACACTTGTGTGACGGTTATACAA
ATGGTGATGCTGAAATTATTTATTTATTGCAAACGATTCGCATTCACATT
ATGCCTTCCATGAATCCTGATGGGTATGAAAGAGCACGCGAGGGCGATTG
TCAAGGCGTAGGTGGGCGTACAAATGCTAATAACTACGATTTGAACAGAT
GAAAGAAATGCTATTCAAATTATGGTGTGTGGCTTCTATCATATCGCTTG
CCAATGGGATTGTATTCCAGCATCATAATTATGTTCAAATGCAAGATTAT
CTACACAAAATTCACCAGAGATGTCAGAATATTACACGACTTTACAGCAT
TGGGAAGTCCATACGAGGACGTGACTTGTTGGTGATGGAGATAACAGAAA
AACCTGGTGTTTATGTCTCCTTGAAACCTAATTTCAAATACATTGGTAAT
ATGCATGGGAACGAGGCTTGAAGATGGTAGTGAAGTTGTTGGTGCCAAAA
TCGATGTCTCCTGGTCGCTGGGATCACCAAAGAAACGTAAGACCATCACC
ACTACTAAAGGCGGTGATTACTACAGAATTCTATTGAAAGGTGTGTATGA
TTTAACGGTAACTGTTGGTCAAAACAAGCTCAAAACCTCTATAGATATTA
AAAAGGGACAAGTTCTCAGGCAGGATTTCATTGTGAAGATCAACCAACAG
ATTGAAGCATTACCGCCTAAAATTATTAAAGTCAAATCCGTGTTTCCCCA
ACGGGCACCTGTGAAGAAGACTACATTCATGCACGTTTCACATGGTACTA
CAATGGCAATCATTTTCGGATCAGTTGGTTTGATCTTGGTTAGTTTGACT
GGTTTTATGGTGTTCTTTTATCTGAAGCGTCGCCGCGACAGAATGAATGG
CTCGCCGGACGATTCTAAAGCGTTCTACGTCACCAGTACCGAATCCATTT
ATTAGGAATAACAAATGGTGCCGAATGGTATCCGATTACTGGTGGTATGC
AAGACTACAATTATATGTACACAAATGCGTTTGAAGTATTAGTAGAAATG
GCTTGTTGCAAGTATCCATTGGCTGCCAAACTACCACAGCTCTGGCAAGA
CCACAAAAGACCTTTAATCAATTACATGCGGCTGGTTCATTCCGGTGTCA
AAGGCACTGTCAAGAATTTTCCAGATTATTTTCACGGTACAAATCGGATC
ATTCAAAAAGAGACGGACTTAGTGATGAAATGGATCAAACAATATCCATT
CGTATTATCAGCAAACTTCCACGGCGGAGCTTCTGTTGTCAATTATCCAT
ATGATTCTTCAACAACTCATCCTCATATTCGTGGATACAGTGTTTCACCA
GATGATGATATATTTCGTTCCATTTCTAAAGTTTATTCCTACAGTCACCC
AGACATGTTTAAAGGCTATCCAGTATGCAATGACCCGTTTACAGATGGTT
TTAGGTCGTGAACTATTACTCTTTTTATTGGAACACTTGTGTGACGGTTA
TACAAATGGTGATGCTGAAATTATTTATTTATTGCAAACGATTCGCATTC
ACATTATGCCTTCCATGAATCCTGATGGGTATGAAAGAGCACGCGAGGGC
GATTGTCAAGGCGTAGGTGGGCGTACAAATGCTAATAACTACGATTTGAA
CAGATGAAAGAAATGCTATTCAAATTATGGTGTGTGGCTTCTATCATATC
GCTTGCCAATGGGATTGTATTCCAGCATCATAATTATGTTCAAATGCAAG
ATTATCTACACAAAATTCACCAGAGATGTCAGAATATTACACGACTTTAC
AGCATTGGGAAGTCCATACGAGGACGTGACTTGTTGGTGATGGAGATAAC
AGAAAAACCTGGTGTTTATGTCTCCTTGAAACCTAATTTCAAATACATTG
GTAATATGCATGGGAACGAGGCTTGAAGATGGTAGTGAAGTTGTTGGTGC
CAAAATCGATGTCTCCTGGTCGCTGGGATCACCAAAGAAACGTAAGACCA
TCACCACTACTAAAGGCGGTGATTACTACAGAATTCTATTGAAAGGTGTG
TATGATTTAACGGTAACTGTTGGTCAAAACAAGCTCAAAACCTCTATAGA
TATTAAAAAGGGACAAGTTCTCAGGCAGGATTTCATTGTGAAGATCAACC
AACAGATTGAAGCATTACCGCCTAAAATTATTAAAGTCAAATCCGTGTTT
CCCCAACGGGCACCTGTGAAGAAGACTACATTCATGCACGTTTCACATGG
TACTACAATGGCAATCATTTTCGGATCAGTTGGTTTGATCTTGGTTAGTT
TGACTGGTTTTATGGTGTTCTTTTATCTGAAGCGTCGCCGCGACAGAATG
AATGGCTCGCCGGACGATTCTAAAGCGTTCTACGTCACCAGTACCGAATC
CATTTATTAGGAATAACAAATGGTGCCGAATGGTATCCGATTACTGGTGG
TATGCAAGACTACAATTATATGTACACAAATGCGTTTGAAGTATTAGTAG
AAATGGCTTGTTGCAAGTATCCATTGGCTGCCAAACTACCACAGCTCTGG
CAAGACCACAAAAGACCTTTAATCAATTACATGCGGCTGGTTCATTCCGG
TGTCAAAGGCACTGTCAAGAATTTTCCAGATTATTTTCACGGTACAAATC
GGATCATTCAAAAAGAGACGGACTTAGTGATGAAATGGATCAAACAATAT
CCATTCGTATTATCAGCAAACTTCCACGGCGGAGCTTCTGTTGTCAATTA
TCCATATGATTCTTCAACAACTCATCCTCATATTCGTGGATACAGTGTTT
CACCAGATGATGATATATTTCGTTCCATTTCTAAAGTTTATTCCTACAGT
CACCCAGACATGTTTAAAGGCTATCCAGTATGCAATGACCCGTTTACAGA
TGGTTTTAGGTCGTGAACTATTACTCTTTTTATTGGAACACTTGTGTGAC
GGTTATACAAATGGTGATGCTGAAATTATTTATTTATTGCAAACGATTCG
CATTCACATTATGCCTTCCATGAATCCTGATGGGTATGAAAGAGCACGCG
AGGGCGATTGTCAAGGCGTAGGTGGGCGTACAAATGCTAATAACTACGAT
TTGAACAGATGAAAGAAATGCTATTCAAATTATGGTGTGTGGCTTCTATC
ATATCGCTTGCCAATGGGATTGTATTCCAGCATCATAATTATGTTCAAAT
GCAAGATTATCTACACAAAATTCACCAGAGATGTCAGAATATTACACGAC
TTTACAGCATTGGGAAGTCCATACGAGGACGTGACTTGTTGGTGATGGAG
ATAACAGAAAAACCTGGTGTTTATGTCTCCTTGAAACCTAATTTCAAATA
CATTGGTAATATGCATGGGAACGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036718XLOC_036718Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058290-exon-scaffold_309-1575043694:422270..422604TCONS_00058290-exon-scaffold_309-1575043694:422270..422604Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1575043694:420937..421142TCONS_00058290-exon-scaffold_309-1575043694:420937..421142Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1575043694:420037..420320TCONS_00058290-exon-scaffold_309-1575043694:420037..420320Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1575043694:419059..419266TCONS_00058290-exon-scaffold_309-1575043694:419059..419266Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1575043694:416544..417251TCONS_00058290-exon-scaffold_309-1575043694:416544..417251Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1510915933:422270..422604TCONS_00058290-exon-scaffold_309-1510915933:422270..422604Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1510915933:420937..421142TCONS_00058290-exon-scaffold_309-1510915933:420937..421142Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1510915933:420037..420320TCONS_00058290-exon-scaffold_309-1510915933:420037..420320Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1510915933:419059..419266TCONS_00058290-exon-scaffold_309-1510915933:419059..419266Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1510915933:416544..417251TCONS_00058290-exon-scaffold_309-1510915933:416544..417251Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1491911889:422270..422604TCONS_00058290-exon-scaffold_309-1491911889:422270..422604Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1491911889:420937..421142TCONS_00058290-exon-scaffold_309-1491911889:420937..421142Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1491911889:420037..420320TCONS_00058290-exon-scaffold_309-1491911889:420037..420320Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1491911889:419059..419266TCONS_00058290-exon-scaffold_309-1491911889:419059..419266Clytia hemisphaericaexon
TCONS_00058290-exon-scaffold_309-1491911889:416544..417251TCONS_00058290-exon-scaffold_309-1491911889:416544..417251Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00058290-proteinTCONS_00058290-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_309supercontigscaffold_309:416544..422604 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.70946	2.03242	1.12212	2.41135	5.91491	3.94227	8.56856	8.61279	8.91646	8.40504	13.4906	9.97498	19.1203	17.8186	7.48506	8.18356	16.3714	17.1656	22.5248	28.5165	22.9496	23.2621	10.4881	11.5899	23.9187	22.9372	6.27299	8.60772	6.42584	7.77773
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000834Peptidase_M14
IPR008969CarboxyPept-like_regulatory
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0004181metallocarboxypeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004181 metallocarboxypeptidase activity
molecular_function GO:0008270 zinc ion binding
Blast
[Close]
BLAST of TCONS_00058290 vs. Swiss-Prot (Human)
Match: CBPD (Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=2)

HSP 1 Score: 325.479 bits (833), Expect = 2.202e-97
Identity = 178/379 (46.97%), Postives = 241/379 (63.59%), Query Frame = 3 
Query:  135 FQHHNYVQMQDYLHKIHQRCQNITRLYSIGKSIRGRDLLVMEITEKPGVYVSLKPNFKYIGNMHGNXXXXXXXXXXXXXXXCDGYTNGDAEIIYLLQTIRIHIMPSMNPDGYERAREGDCQGVGGRTNANNYDLNRNFPDYFHGTNRIIQKETDLVMKWIKQYPFVLSANFHGGASVVNYPYDSSTTHPHIRGYSVSPDDDIFRSISKVYSYSHPDMFKGYPV----CNDPFTDGITNGAEWYPITGGMQDYNYMYTNAFEVLVEMACCKYPLAAKLPQLWQDHKRPLINYMRLVHSGVKGTV-KLEDGSEVVGAKIDVSWSLGSPXXXXXXXXXXGGDYYRILLKGVYDLTVTV-GQNKLKTSIDIKKGQVLRQDFIV 1253
            F HH++  M+ +L +      NITRLYS+GKS+  R+L VMEI++ PGV+   +P FKYIGNMHGNEV+GRELLL L+E+LC  +   D E+  L+   RIH+MPSMNPDGYE+++EGD   V GR N+NN+DLNRNFPD F       Q ET  VM W+K YPFVLSAN HGG+ VVNYP+D       +  YS SPDD +F+ I+  YS  +  MF+G P      N+ F  GITNGA WY + GGMQD+NY+ TN FEV +E+ C KYPL  +LP  W+ ++R LI +M+ VH GV+G V    DG  ++ A I V+  +  P           GDY+R+L+ G Y +T +  G N +  ++ +K    ++ +F +
Sbjct:  501 FHHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGVHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGT-DPEVTDLVHNTRIHLMPSMNPDGYEKSQEGDSISVIGRNNSNNFDLNRNFPDQFVQITDPTQPETIAVMSWMKSYPFVLSANLHGGSLVVNYPFDDDEQ--GLATYSKSPDDAVFQQIALSYSKENSQMFQGRPCKNMYPNEYFPHGITNGASWYNVPGGMQDWNYLQTNCFEVTIELGCVKYPLEKELPNFWEQNRRSLIQFMKQVHQGVRGFVLDATDGRGILNATISVA-EINHPVTTYKT-----GDYWRLLVPGTYKITASARGYNPVTKNVTVKSEGAIQVNFTL 870

HSP 2 Score: 261.922 bits (668), Expect = 4.485e-75
Identity = 154/386 (39.90%), Postives = 227/386 (58.81%), Query Frame = 3 
Query:  207 RLYSIGKSIRGRDLLVMEIT-------------------EKPGVYVSLKPNFKYIGNMHGNXXXXXXXXXXXXXXXCDGYTNGDAEIIYLLQTIRIHIMPSMNPDGYERAREGDC-------QGVGGRTNANNYDLNRNFPDYFH-GTNRIIQK--ETDLVMKWIKQYPFVLSANFHGGASVVNYPYDSSTTHPHIRGYSVSPDDDIFRSISKVYSYSHPDMFKGYPVC----NDPFTDGITNGAEWYPITGGMQDYNYMYTNAFEVLVEMACCKYPLAAKLPQLWQDHKRPLINYMRLVHSGVKGTVKLE-DGSEVVGAKIDVSWSLGSPXXXXXXXXXXGGDYYRILLKGVYDLTVTV-GQNKLK-TSIDIKKGQVLRQDFIVK 1256
            RL+SIG+S+ GR L V+ +T                   +  G  +  +P  K +GNMHG+E + R++L++L   L  GY  GD  ++ LL T  ++++PS+NPDG+ERAREGDC        G  GR N+   DLNR+FPD F  G    + +  E   +++WI++  FVLS N HGG+ V +YP+D S  H     YS + DD++F+ ++K Y+ +HP M  G P C    ++ F DGITNGA WY + GGMQDYNY++ N FE+ +E++CCKYP A++L Q W++++  LI  +  VH GVKG VK    GS +  A I V+           ITT + GD+YR+L+ G Y+LTV + G   L  T++ +K+G     DF ++
Sbjct:   81 RLFSIGRSVEGRPLWVLRLTAGLGSLIPEGDAGPDAAGPDAAGPLLPGRPQVKLVGNMHGDETVSRQVLIYLARELAAGYRRGDPRLVRLLNTTDVYLLPSLNPDGFERAREGDCGFGDGGPSGASGRDNSRGRDLNRSFPDQFSTGEPPALDEVPEVRALIEWIRRNKFVLSGNLHGGSVVASYPFDDSPEHKATGIYSKTSDDEVFKYLAKAYASNHPIMKTGEPHCPGDEDETFKDGITNGAHWYDVEGGMQDYNYVWANCFEITLELSCCKYPPASQLRQEWENNRESLITLIEKVHIGVKGFVKDSITGSGLENATISVA------GINHNITTGRFGDFYRLLVPGTYNLTVVLTGYMPLTVTNVVVKEGPATEVDFSLR 460

HSP 3 Score: 177.948 bits (450), Expect = 1.368e-46
Identity = 119/362 (32.87%), Postives = 196/362 (54.14%), Query Frame = 3 
Query:  102 ASIISLANGIVFQHHNYVQMQDYLHKIHQRCQNITRLYSIGKSIRGRDLLVMEITEKPGVYVSLKPNFKYIGNMHGNXXXXXXXXXXXXXXXCDGYTNGDAEIIYLLQTIRIHIMPSMNPDGYERAREGDCQGVGGRTNANNYDLNRNFPDYFHGTNRIIQKETDLVMK-WIKQYPFVLSANFHGGASVVNYPYDSSTTHPHIRGYSVSPDDDIFRSISKVYSYSHPDMFKGYPVC----NDPFTDGITNGAEWYPITGGMQDYNYMYTNAFEVLVEMACCKYPLAAKLPQLWQDHKRPLINYMRLVHSGVKGTVKLEDGSEVVGAKIDVSWSLGSPXXXXXXXXXXGGDYYRILLKGVYDL 1172
            +S ++LA   ++++H+Y  + ++L  +     +IT L ++G+S   R +  +EI+ KP V    +P  +++  +HGN  +G ELLL L E LC  Y    A +  L+   RI I+PS+NPDG ERA+E DC    G+TNA   DL+ +F      TN   Q ET  +++  I++  F LS    GG+ +V YPYD        +      + +  + ++ +Y+ +HP M  G P C    ++    G+  GAEW+   G M+DY+  Y +  E+ V  +CC +P AA+LP LW D+KR L++ +  VH GV G VK + G  +  A I ++  +        + T +GG ++ +L  GV+++
Sbjct:  923 SSNLALA---LYRYHSYKDLSEFLRGLVMNYPHITNLTNLGQSTEYRHIWSLEISNKPNVSEPEEPKIRFVAGIHGNAPVGTELLLALAEFLCLNYKKNPA-VTQLVDRTRIVIVPSLNPDGRERAQEKDCTSKIGQTNARGKDLDTDF------TNNASQPETKAIIENLIQKQDFSLSVALDGGSMLVTYPYD--------KPVQTVENKETLKHLASLYANNHPSMHMGQPSCPNKSDENIPGGVMRGAEWHSHLGSMKDYSVTYGHCPEITVYTSCCYFPSAARLPSLWADNKRSLLSMLVEVHKGVHGFVKDKTGKPISKAVIVLNEGI-------KVQTKEGGYFHVLLAPGVHNI 1259
The following BLAST results are available for this feature:
BLAST of TCONS_00058290 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CBPD2.202e-9746.97Carboxypeptidase D OS=Homo sapiens GN=CPD PE=1 SV=... [more]
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