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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00058103 ID=TCONS_00058103|Name=TCONS_00058103|organism=Clytia hemisphaerica|type=transcript|length=1039bp
TCGTTGCTCCCTCAAATCGACGATCCACCGGGTCAACCCAGAAAGTCGAC
GAATTGTCAAACTATCAAATCATCGAGTCATCAAGTCACCTACCCGTCGC
ATCATCGTTCAATTACAATGCCAATAAACAAACATTCATTACAAATTTAT
GCAATTAAGAACAAAAATCAGATTTGATTACAAAATGTATGGCAACGATG
GATCAAAAATTCCCAAAGGCGAAGCCAATCAAGAGCCCTCATTAAAAACT
TTACACGACTCCTTCAAAGTAGTCCATGAGGATATAAAAGACTATATCGA
TGAAAATGAAATCGATGAGACATTGTCAATACCTGAGATTGAtgaattaa
tttcaaaaattgaaacctTAAGAACAACTTACCGCCATCTgttcatccaa
ttcccaaaagacaacATGGAGGATGTATTCAATGACTCTTATTATGCAAC
AATAAATGACATTAAACATTATGTCAACTCTGCTAGAAATAAGAAGAAAG
AGTTGAAAAGCAAGCTGTCATCGTCAACTGAATTTGCAAACCTTAAATGC
AATGAATTCATGATCAGAAACATTAAATCAACACTAAAACTTGTTGAATC
AAAACTTGAAGCTGATCTGACTGGAGCCACTGAATCAGAAATGAAGAATG
CCCACAAAGACTCATGCCATATCACCAAGTCAATGGAAAAACTATCTACC
GACATCAAAATGCTCATAAAAGAGACAGCTGGCACACCCAAGGACGCCGA
AGTCCAATTGATTCAAGAACGTTATGAACGATGCAACAACAATCTTCACA
AACACAATGCAACCATCAATGACGAGCTTACAAAACGTGAACTCGATAAA
CATGCTAACTTTAAAGATTCTCTACTGAACATCAAAATATCGAAATTCGG
TGGTTTCAACTCCAAAACAGACATCTACACCTTCCAAAGTGACTTCGAAA
AACTGCACGCTAAAGGCACACCCACGTGCTTCCTACCTGATTTGCTGAGG
AATAATTATCTCAAAGAGCCAGCACTGTCGATGGTCAAG Run BLAST on NCBI protein sequence of TCONS_00058103-protein >TCONS_00058103-protein ID=TCONS_00058103-protein|Name=TCONS_00058103-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MQLRTKIRFDYKMYGNDGSKIPKGEANQEPSLKTLHDSFKVVHEDIKDYI
DENEIDETLSIPEIDELISKIETLRTTYRHLFIQFPKDNMEDVFNDSYYA
TINDIKHYVNSARNKKKELKSKLSSSTEFANLKCNEFMIRNIKSTLKLVE
SKLEADLTGATESEMKNAHKDSCHITKSMEKLSTDIKMLIKETAGTPKDA
EVQLIQERYERCNNNLHKHNATINDELTKRELDKHANFKDSLLNIKISKF
GGFNSKTDIYTFQSDFEKLHAKGTPTCFLPDLLRNNYLKEPALSMVK Run BLAST on NCBI transcript from alignment at scaffold_305:122277..123315 Legend: exonCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00058103 ID=TCONS_00058103|Name=TCONS_00058103|organism=Clytia hemisphaerica|type=transcript|length=1039bp|location=Sequence derived from alignment at scaffold_305:122277..123315 (Clytia hemisphaerica)
CTTGACCATCGACAGTGCTGGCTCTTTGAGATAATTATTCCTCAGCAAAT
CAGGTAGGAAGCACGTGGGTGTGCCTTTAGCGTGCAGTTTTTCGAAGTCA
CTTTGGAAGGTGTAGATGTCTGTTTTGGAGTTGAAACCACCGAATTTCGA
TATTTTGATGTTCAGTAGAGAATCTTTAAAGTTAGCATGTTTATCGAGTT
CACGTTTTGTAAGCTCGTCATTGATGGTTGCATTGTGTTTGTGAAGATTG
TTGTTGCATCGTTCATAACGTTCTTGAATCAATTGGACTTCGGCGTCCTT
GGGTGTGCCAGCTGTCTCTTTTATGAGCATTTTGATGTCGGTAGATAGTT
TTTCCATTGACTTGGTGATATGGCATGAGTCTTTGTGGGCATTCTTCATT
TCTGATTCAGTGGCTCCAGTCAGATCAGCTTCAAGTTTTGATTCAACAAG
TTTTAGTGTTGATTTAATGTTTCTGATCATGAATTCATTGCATTTAAGGT
TTGCAAATTCAGTTGACGATGACAGCTTGCTTTTCAACTCTTTCTTCTTA
TTTCTAGCAGAGTTGACATAATGTTTAATGTCATTTATTGTTGCATAATA
AGAGTCATTGAATACATCCTCCATgttgtcttttgggaattggatgaacA
GATGGCGGTAAGTTGTTCTTAaggtttcaatttttgaaattaattcaTCA
ATCTCAGGTATTGACAATGTCTCATCGATTTCATTTTCATCGATATAGTC
TTTTATATCCTCATGGACTACTTTGAAGGAGTCGTGTAAAGTTTTTAATG
AGGGCTCTTGATTGGCTTCGCCTTTGGGAATTTTTGATCCATCGTTGCCA
TACATTTTGTAATCAAATCTGATTTTTGTTCTTAATTGCATAAATTTGTA
ATGAATGTTTGTTTATTGGCATTGTAATTGAACGATGATGCGACGGGTAG
GTGACTTGATGACTCGATGATTTGATAGTTTGACAATTCGTCGACTTTCT
GGGTTGACCCGGTGGATCGTCGATTTGAGGGAGCAACGA Coding sequence (CDS) from alignment at scaffold_305:122277..123315 >TCONS_00058103 ID=TCONS_00058103|Name=TCONS_00058103|organism=Clytia hemisphaerica|type=CDS|length=891bp|location=Sequence derived from alignment at scaffold_305:122277..123315 (Clytia hemisphaerica)
CTTGACCATCGACAGTGCTGGCTCTTTGAGATAATTATTCCTCAGCAAAT
CAGGTAGGAAGCACGTGGGTGTGCCTTTAGCGTGCAGTTTTTCGAAGTCA
CTTTGGAAGGTGTAGATGTCTGTTTTGGAGTTGAAACCACCGAATTTCGA
TATTTTGATGTTCAGTAGAGAATCTTTAAAGTTAGCATGTTTATCGAGTT
CACGTTTTGTAAGCTCGTCATTGATGGTTGCATTGTGTTTGTGAAGATTG
TTGTTGCATCGTTCATAACGTTCTTGAATCAATTGGACTTCGGCGTCCTT
GGGTGTGCCAGCTGTCTCTTTTATGAGCATTTTGATGTCGGTAGATAGTT
TTTCCATTGACTTGGTGATATGGCATGAGTCTTTGTGGGCATTCTTCATT
TCTGATTCAGTGGCTCCAGTCAGATCAGCTTCAAGTTTTGATTCAACAAG
TTTTAGTGTTGATTTAATGTTTCTGATCATGAATTCATTGCATTTAAGGT
TTGCAAATTCAGTTGACGATGACAGCTTGCTTTTCAACTCTTTCTTCTTA
TTTCTAGCAGAGTTGACATAATGTTTAATGTCATTTATTGTTGCATAATA
AGAGTCATTGAATACATCCTCCATgttgtcttttgggaattggatgaacA
GATGGCGGTAAGTTGTTCTTAaggtttcaatttttgaaattaattcaTCA
ATCTCAGGTATTGACAATGTCTCATCGATTTCATTTTCATCGATATAGTC
TTTTATATCCTCATGGACTACTTTGAAGGAGTCGTGTAAAGTTTTTAATG
AGGGCTCTTGATTGGCTTCGCCTTTGGGAATTTTTGATCCATCGTTGCCA
TACATTTTGTAATCAAATCTGATTTTTGTTCTTAATTGCAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00058103-exon-scaffold_305-1491911889:122277..123315 | TCONS_00058103-exon-scaffold_305-1491911889:122277..123315 | Clytia hemisphaerica | exon |
| TCONS_00058103-exon-scaffold_305-1510915933:122277..123315 | TCONS_00058103-exon-scaffold_305-1510915933:122277..123315 | Clytia hemisphaerica | exon |
| TCONS_00058103-exon-scaffold_305-1575043694:122277..123315 | TCONS_00058103-exon-scaffold_305-1575043694:122277..123315 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_305 | supercontig | scaffold_305:122277..123315 . |
Blast
The following BLAST results are available for this feature:
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