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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057618 ID=TCONS_00057618|Name=TCONS_00057618|organism=Clytia hemisphaerica|type=transcript|length=934bp
atttttcgagtttgaTGAATTCATGAAACGCTGCATTTACTTATGGTATT
TTGATATTATTCCCTTTACTTCTTTCAGGATTAGTTGAACAagattgtca
ttttgaaaagagGATATCCCCTTACATGATCAGTTCGGGGATAACCACTA
TCACTTGTTTTGGATGTCTCGCTCTTGGTCTTTACATAAAAGCTGAAACT
GAGCGAAACACTCTGGGAAATGTGCTTCTGGTAATAGGTATTATATTATG
GGTCTGTGTGTTTGGTCTTCAAATCTGGGGAAGTATCATAATTCTTCCCC
ATTGGGACAAGTGGAATAAAAAGTTGGACCAATTCCCTTGCAATCAGCAT
ATCTTCAAATTTGGGTTCTCTATGATTACTCTATTTTGGATTTTAACAGG
TTTGAGTATTAATTTCTGTTTGAAAGGTATTTTGGATAAGTCGTGATTTT
CATCTCTGCTAAGCATTTTATTCGATACACTATATACTATTTTTTATATC
CATTCTCTTTTATTTCATTCAACTTAATCTTAATTGATGATGGGTAGATC
CCAATAAATTCTCTTATTAATGTTTACCAGTTTTTGTACCTGGCATTGCA
CACCGGTTAAGCTGTAGATGAGCGCACTTCAAGTcatttggatgttgaag
ctggcttgaATATagaaagttcaaaatatttaaaaaaaatcaaaagtgaa
gaTTAAAGAtgtagaagaaaaaaattaaaaaaaacagacaaaatcTACCC
GCTTTGGAGGGATTTAGAATAAATCAAGGCACATTTGAAATCAGTGAAGT
TCAATGTTTTAGTAAAATAAAATGAACATTTTGTATTTCTGATGATTGCA
GTAAGACATGAAACTTGAAGTAATGTaccttttttaccttttttttttac
ttcaaattttgaaataaataaatttaaaattttt Run BLAST on NCBI transcript from alignment at scaffold_294:141778..142711+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057618 ID=TCONS_00057618|Name=TCONS_00057618|organism=Clytia hemisphaerica|type=transcript|length=934bp|location=Sequence derived from alignment at scaffold_294:141778..142711+ (Clytia hemisphaerica)
atttttcgagtttgaTGAATTCATGAAACGCTGCATTTACTTATGGTATT
TTGATATTATTCCCTTTACTTCTTTCAGGATTAGTTGAACAagattgtca
ttttgaaaagagGATATCCCCTTACATGATCAGTTCGGGGATAACCACTA
TCACTTGTTTTGGATGTCTCGCTCTTGGTCTTTACATAAAAGCTGAAACT
GAGCGAAACACTCTGGGAAATGTGCTTCTGGTAATAGGTATTATATTATG
GGTCTGTGTGTTTGGTCTTCAAATCTGGGGAAGTATCATAATTCTTCCCC
ATTGGGACAAGTGGAATAAAAAGTTGGACCAATTCCCTTGCAATCAGCAT
ATCTTCAAATTTGGGTTCTCTATGATTACTCTATTTTGGATTTTAACAGG
TTTGAGTATTAATTTCTGTTTGAAAGGTATTTTGGATAAGTCGTGATTTT
CATCTCTGCTAAGCATTTTATTCGATACACTATATACTATTTTTTATATC
CATTCTCTTTTATTTCATTCAACTTAATCTTAATTGATGATGGGTAGATC
CCAATAAATTCTCTTATTAATGTTTACCAGTTTTTGTACCTGGCATTGCA
CACCGGTTAAGCTGTAGATGAGCGCACTTCAAGTcatttggatgttgaag
ctggcttgaATATagaaagttcaaaatatttaaaaaaaatcaaaagtgaa
gaTTAAAGAtgtagaagaaaaaaattaaaaaaaacagacaaaatcTACCC
GCTTTGGAGGGATTTAGAATAAATCAAGGCACATTTGAAATCAGTGAAGT
TCAATGTTTTAGTAAAATAAAATGAACATTTTGTATTTCTGATGATTGCA
GTAAGACATGAAACTTGAAGTAATGTaccttttttaccttttttttttac
ttcaaattttgaaataaataaatttaaaattttt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057618-exon-scaffold_294-1491911889:141778..142711 | TCONS_00057618-exon-scaffold_294-1491911889:141778..142711 | Clytia hemisphaerica | exon |
| TCONS_00057618-exon-scaffold_294-1510915933:141778..142711 | TCONS_00057618-exon-scaffold_294-1510915933:141778..142711 | Clytia hemisphaerica | exon |
| TCONS_00057618-exon-scaffold_294-1575043694:141778..142711 | TCONS_00057618-exon-scaffold_294-1575043694:141778..142711 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_294 | supercontig | scaffold_294:141778..142711 + |
Blast
The following BLAST results are available for this feature:
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