TCONS_00057589 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057589
Unique NameTCONS_00057589
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length169

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057589 ID=TCONS_00057589|Name=TCONS_00057589|organism=Clytia hemisphaerica|type=transcript|length=169bp
AATACATTACATAGCCATCTGCAGATTCTCACGGTTATTCCACGTTTGTA
TGTAGAACTTGGCCGTTGTGCTAGATCTGTTCTTCATAAAATTGTGAGCC
AAGCTGTCAACAGGTTCATTTCTTGTAGCGGTCAAATGGGATGCAATGGA
GTGCCTGATTTTCGTTGGA
Run BLAST on NCBI

transcript from alignment at scaffold_293:146673..146841

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057589 ID=TCONS_00057589|Name=TCONS_00057589|organism=Clytia hemisphaerica|type=transcript|length=169bp|location=Sequence derived from alignment at scaffold_293:146673..146841 (Clytia hemisphaerica)
TCCAACGAAAATCAGGCACTCCATTGCATCCCATTTGACCGCTACAAGAA
ATGAACCTGTTGACAGCTTGGCTCACAATTTTATGAAGAACAGATCTAGC
ACAACGGCCAAGTTCTACATACAAACGTGGAATAACCGTGAGAATCTGCA
GATGGCTATGTAATGTATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036315XLOC_036315Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057589-exon-scaffold_293-1491911889:146673..146841TCONS_00057589-exon-scaffold_293-1491911889:146673..146841Clytia hemisphaericaexon
TCONS_00057589-exon-scaffold_293-1510915933:146673..146841TCONS_00057589-exon-scaffold_293-1510915933:146673..146841Clytia hemisphaericaexon
TCONS_00057589-exon-scaffold_293-1575043694:146673..146841TCONS_00057589-exon-scaffold_293-1575043694:146673..146841Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_293supercontigscaffold_293:146673..146841 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057589 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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