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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057433 ID=TCONS_00057433|Name=TCONS_00057433|organism=Clytia hemisphaerica|type=transcript|length=1557bp
CACAAGGGTAACAAAAGTCACCATATTGCAAAGAGCTGTAGACTTATCGC
TATAAAGGTCGAATACTGAAACTTTGGGattgttttatttgaaaaatata
actaGTTATGCGATTATCGTCCCGATCTTAGATAAAGAGATTCGATTATT
TGTCACAAAtttgatttggaaaaaaaaacgaagaaatatATCGATTTCAT
CGAGATCACCTCAGGTTTAACAAGATGTGGACAATGAACCATTCAACGCT
TGCACCTACCATTATGACTcgaatcaatcaaccaatcagaatctCTCCTT
TCAACCTCGTTACCATGTCCCTTCTGGTAGCCATTATGATTATCGGTTGC
TTTGGTAACTCCGTCATCATTTACGTATTTGCGTATAAACGTCGTGAACA
AATCAAGAGGTTCGAGAGATTCCTTTTATTGTTAGCCGTCGTGGATTTGA
CGGCGTCGTTAGTCATCCCAAgctcatttttttatttgacggcAACAGAT
TTCCGACGTTGGGATTTTGGGGAGACTGGTTGCCGTATTATCCCTTCCTT
ACTTCAAATGAGTATCACGATCTCACACGGCGTGCTGATCCTCATCAGTT
ACGAACGATACCACACCCTCGTTAAACCGTTCAATCCGAGAATTGGTCGA
CCTATCATCCTTGTTTGGTTGCTCTTTTTCGTATTCCTTTCTATCGGTTT
GATGTTCCCTTACATGAAGACACTCACCATCATAGTCAACGAACATTACC
AGATTAAAACTTGTATGCCGGACGCGCAACGTATCAGTCTCCTCATGCTC
TCTTCATCCCTTCAAGTTTTAAGAGATATTTTTGCCATTGGTATCATGGC
TATATTGAATCAACGCATGAACCACGCGCTTACAAAACAACAGCGTGACT
TGACGTGGAAACGGGAAAAAATGTCACGCAAAGGGCGTGCACTTTTACGG
CGCGTGATTGTTATATTTAGTGGACTTACGTTACCCGTGGACATTTTTCA
AGCCGTCTTTTACTCTTTAGTTTTCGCAGGTGTACCACTATCGAAAACTT
CATTCAAGATACTTTCGCACATCAACACTCTGTTGAACATTTTACAAATG
GGAAACTCAAtggtcaatattttcatttattcaCGCATGCATGATATGTT
TCAACTTCAATGGTGCCGGGCGACCACGCGATCGAACGCGCACAGACGGA
GGATTACGCAAAGCGAATATCTTCCCAACGATACAGAAGctttaacaaaa
agttatgGTTCCAGCCGTGAAGGATCTTACGACTTTTGAACTTATGAACG
AAATCCTCTACAAGGCTGTTGTACTTGTATTTTGTCGGACAATTGCTATA
CACAATAACAGAGATTTTTTAGGCGGGGCTCTTTCCCGGGGAGGCACTCA
GGTGAAATTGGCAACgtggacgtgccgctggtcaggcatagggtcccttt
tttaggctctgaagataggGTCCTAAATTTAccaattttcaacatttcaa
aTTCTTTCGATTTTCCTTCCGGTAGGGtccaaaatttaccaaacattcat
atctgac Run BLAST on NCBI protein sequence of G protein coupled receptor >TCONS_00057433-protein ID=TCONS_00057433-protein|Name=G protein coupled receptor|organism=Clytia hemisphaerica|type=polypeptide|length=354bp
MWTMNHSTLAPTIMTRINQPIRISPFNLVTMSLLVAIMIIGCFGNSVIIY
VFAYKRREQIKRFERFLLLLAVVDLTASLVIPSSFFYLTATDFRRWDFGE
TGCRIIPSLLQMSITISHGVLILISYERYHTLVKPFNPRIGRPIILVWLL
FFVFLSIGLMFPYMKTLTIIVNEHYQIKTCMPDAQRISLLMLSSSLQVLR
DIFAIGIMAILNQRMNHALTKQQRDLTWKREKMSRKGRALLRRVIVIFSG
LTLPVDIFQAVFYSLVFAGVPLSKTSFKILSHINTLLNILQMGNSMVNIF
IYSRMHDMFQLQWCRATTRSNAHRRRITQSEYLPNDTEALTKSYGSSREG
SYDF Run BLAST on NCBI transcript from alignment at scaffold_288:448560..450116 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057433 ID=TCONS_00057433|Name=TCONS_00057433|organism=Clytia hemisphaerica|type=transcript|length=1557bp|location=Sequence derived from alignment at scaffold_288:448560..450116 (Clytia hemisphaerica)
gtcagatatgaatgtttggtaaattttggaCCCTACCGGAAGGAAAATCG
AAAGAAtttgaaatgttgaaaattggTAAATTTAGGACcctatcttcaga
gcctaaaaaagggaccctatgcctgaccagcggcacgtccacGTTGCCAA
TTTCACCTGAGTGCCTCCCCGGGAAAGAGCCCCGCCTAAAAAATCTCTGT
TATTGTGTATAGCAATTGTCCGACAAAATACAAGTACAACAGCCTTGTAG
AGGATTTCGTTCATAAGTTCAAAAGTCGTAAGATCCTTCACGGCTGGAAC
cataactttttgttaaagCTTCTGTATCGTTGGGAAGATATTCGCTTTGC
GTAATCCTCCGTCTGTGCGCGTTCGATCGCGTGGTCGCCCGGCACCATTG
AAGTTGAAACATATCATGCATGCGtgaataaatgaaaatattgaccaTTG
AGTTTCCCATTTGTAAAATGTTCAACAGAGTGTTGATGTGCGAAAGTATC
TTGAATGAAGTTTTCGATAGTGGTACACCTGCGAAAACTAAAGAGTAAAA
GACGGCTTGAAAAATGTCCACGGGTAACGTAAGTCCACTAAATATAACAA
TCACGCGCCGTAAAAGTGCACGCCCTTTGCGTGACATTTTTTCCCGTTTC
CACGTCAAGTCACGCTGTTGTTTTGTAAGCGCGTGGTTCATGCGTTGATT
CAATATAGCCATGATACCAATGGCAAAAATATCTCTTAAAACTTGAAGGG
ATGAAGAGAGCATGAGGAGACTGATACGTTGCGCGTCCGGCATACAAGTT
TTAATCTGGTAATGTTCGTTGACTATGATGGTGAGTGTCTTCATGTAAGG
GAACATCAAACCGATAGAAAGGAATACGAAAAAGAGCAACCAAACAAGGA
TGATAGGTCGACCAATTCTCGGATTGAACGGTTTAACGAGGGTGTGGTAT
CGTTCGTAACTGATGAGGATCAGCACGCCGTGTGAGATCGTGATACTCAT
TTGAAGTAAGGAAGGGATAATACGGCAACCAGTCTCCCCAAAATCCCAAC
GTCGGAAATCTGTTgccgtcaaataaaaaaatgagcTTGGGATGACTAAC
GACGCCGTCAAATCCACGACGGCTAACAATAAAAGGAATCTCTCGAACCT
CTTGATTTGTTCACGACGTTTATACGCAAATACGTAAATGATGACGGAGT
TACCAAAGCAACCGATAATCATAATGGCTACCAGAAGGGACATGGTAACG
AGGTTGAAAGGAGagattctgattggttgattgattcgAGTCATAATGGT
AGGTGCAAGCGTTGAATGGTTCATTGTCCACATCTTGTTAAACCTGAGGT
GATCTCGATGAAATCGATatatttcttcgtttttttttccaaatcaaaTT
TGTGACAAATAATCGAATCTCTTTATCTAAGATCGGGACGATAATCGCAT
AACtagttatatttttcaaataaaacaatCCCAAAGTTTCAGTATTCGAC
CTTTATAGCGATAAGTCTACAGCTCTTTGCAATATGGTGACTTTTGTTAC
CCTTGTG Coding sequence (CDS) from alignment at scaffold_288:448560..450116 >TCONS_00057433 ID=TCONS_00057433|Name=TCONS_00057433|organism=Clytia hemisphaerica|type=CDS|length=1065bp|location=Sequence derived from alignment at scaffold_288:448560..450116 (Clytia hemisphaerica)
TCAAAAGTCGTAAGATCCTTCACGGCTGGAACcataactttttgttaaag
CTTCTGTATCGTTGGGAAGATATTCGCTTTGCGTAATCCTCCGTCTGTGC
GCGTTCGATCGCGTGGTCGCCCGGCACCATTGAAGTTGAAACATATCATG
CATGCGtgaataaatgaaaatattgaccaTTGAGTTTCCCATTTGTAAAA
TGTTCAACAGAGTGTTGATGTGCGAAAGTATCTTGAATGAAGTTTTCGAT
AGTGGTACACCTGCGAAAACTAAAGAGTAAAAGACGGCTTGAAAAATGTC
CACGGGTAACGTAAGTCCACTAAATATAACAATCACGCGCCGTAAAAGTG
CACGCCCTTTGCGTGACATTTTTTCCCGTTTCCACGTCAAGTCACGCTGT
TGTTTTGTAAGCGCGTGGTTCATGCGTTGATTCAATATAGCCATGATACC
AATGGCAAAAATATCTCTTAAAACTTGAAGGGATGAAGAGAGCATGAGGA
GACTGATACGTTGCGCGTCCGGCATACAAGTTTTAATCTGGTAATGTTCG
TTGACTATGATGGTGAGTGTCTTCATGTAAGGGAACATCAAACCGATAGA
AAGGAATACGAAAAAGAGCAACCAAACAAGGATGATAGGTCGACCAATTC
TCGGATTGAACGGTTTAACGAGGGTGTGGTATCGTTCGTAACTGATGAGG
ATCAGCACGCCGTGTGAGATCGTGATACTCATTTGAAGTAAGGAAGGGAT
AATACGGCAACCAGTCTCCCCAAAATCCCAACGTCGGAAATCTGTTgccg
tcaaataaaaaaatgagcTTGGGATGACTAACGACGCCGTCAAATCCACG
ACGGCTAACAATAAAAGGAATCTCTCGAACCTCTTGATTTGTTCACGACG
TTTATACGCAAATACGTAAATGATGACGGAGTTACCAAAGCAACCGATAA
TCATAATGGCTACCAGAAGGGACATGGTAACGAGGTTGAAAGGAGagatt
ctgattggttgattgattcgAGTCATAATGGTAGGTGCAAGCGTTGAATG
GTTCATTGTCCACAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057433-exon-scaffold_288-1491911889:448560..450116 | TCONS_00057433-exon-scaffold_288-1491911889:448560..450116 | Clytia hemisphaerica | exon |
| TCONS_00057433-exon-scaffold_288-1510915933:448560..450116 | TCONS_00057433-exon-scaffold_288-1510915933:448560..450116 | Clytia hemisphaerica | exon |
| TCONS_00057433-exon-scaffold_288-1575043694:448560..450116 | TCONS_00057433-exon-scaffold_288-1575043694:448560..450116 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:448560..450116 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0007186 | G-protein coupled receptor signaling pathway |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004930 | G-protein coupled receptor activity |
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0007186 |
G-protein coupled receptor signaling pathway |
| cellular_component |
GO:0016021 |
integral component of membrane |
| molecular_function |
GO:0004930 |
G-protein coupled receptor activity |
Blast
The following BLAST results are available for this feature:
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