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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057401 ID=TCONS_00057401|Name=TCONS_00057401|organism=Clytia hemisphaerica|type=transcript|length=672bp
ATCATGGCATTAAGATATGCGTTTTTCTAGACGACGGGGGCGGGACGGAG
AGTAATTTAGTCAAAGCCATTTCGAGCTCCAACTTCGTCAAGCGGTCACT
TAAATCGTCTGGTTTTGTAGTAAACCAAGAAAAATCTGTTTGGCACCCCC
AGAAACGACTGACTTGGCTTGGAGTAATTATCGACTTCTCAGAGAACGCC
TACTTTATCACAGAAAAAAGGATCGAGACCTTAATCGATTTGATAATCAA
GACTCTAACCATGAACGAGTTACGTCTAGAACTTTGTCAAAAGTAGCAGG
CTCTATAATTTCTATGAAATTTGTATTAGGTGATATTACTCAATTAAAAT
CTCGTTACTTGTACGAAGCAATCGACAGTGAGGTGGCTTGGGACGCTCCA
catttctttaaagaaattccCACATGCAAAAAGAGAGGTTgaattttgga
tgggaaatttACGTCAGCTTAATCACAGATTTATTTCGGAACACTGGGCC
ACCTTTGTAAATGTATATTCTGACGCAAGTGATTTTGGTATCGGGAGTCA
TATCCCAGCTCTAAGGGTGGAAAGTCATAGAAATCTTGACACAAAAGAGC
AAGGTCTTAGCTCAACATGGAGAGAACTTTCGGCAATTTTGTACAGCCTT
CGATCATTTAAGCAGCTTCTNN Run BLAST on NCBI transcript from alignment at scaffold_288:776348..777092- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057401 ID=TCONS_00057401|Name=TCONS_00057401|organism=Clytia hemisphaerica|type=transcript|length=745bp|location=Sequence derived from alignment at scaffold_288:776348..777092- (Clytia hemisphaerica)
ATCATGGCATTAAGATATGCGTTTTTCTAGACGACGGGGGCGGGACGGAG
AGTAATTTAGTCAAAGCCATTTCGAGCTCCAACTTCGTCAAGCGGTCACT
TAAATCGTCTGGTTTTGTAGTAAACCAAGAAAAATCTGTTTGGCACCCCC
AGAAACGACTGACTTGGCTTGGAGTAATTATCGACTTCTCAGAGAACGCC
TACTTTATCACAGAAAAAAGGATCGAGACCTTAATCGATTTGATAATCAA
GACTCTAACCATGAACGAGTTACGTCTAGAACTTTGTCAAAAGTAGCAGG
CTCTATAATTTCTATGAAATTTGTATTAGGTGATATTACTCAATTAAAAT
CTCGTTACTTGTACGAAGCAATCGACAGTGAGGTGGCTTGGGACGCTCCA
CATTTCTTTAAAGAAATTCCCACATGCAAAAAGAGGTTGAATTTTGGATG
GGAAATTTACGTCAGCTTAATCACAGNTTTCTTTAAAGAAATTCCCACAT
GCAAAAAGAGGTTGAATTTTGGATGGGAAATTTACGTCAGCTTAATCACA
GATTTATTTCGGAACACTGGGCCACCTTTGTAAATGTATATTCTGACGCA
AGTGATTTTGGTATCGGGAGTCATATCCCAGCTCTAAGGGTGGAAAGTCA
TAGAAATCTTGACACAAAAGAGCAAGGTCTTAGCTCAACATGGAGAGAAC
TTTCGGCAATTTTGTACAGCCTTCGATCATTTAAGCAGCTTCTNN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057401-exon-scaffold_288-1575043694:776658..777092 | TCONS_00057401-exon-scaffold_288-1575043694:776658..777092 | Clytia hemisphaerica | exon |
| TCONS_00057401-exon-scaffold_288-1575043694:776348..776584 | TCONS_00057401-exon-scaffold_288-1575043694:776348..776584 | Clytia hemisphaerica | exon |
| TCONS_00057401-exon-scaffold_288-1510915933:776658..777092 | TCONS_00057401-exon-scaffold_288-1510915933:776658..777092 | Clytia hemisphaerica | exon |
| TCONS_00057401-exon-scaffold_288-1510915933:776348..776584 | TCONS_00057401-exon-scaffold_288-1510915933:776348..776584 | Clytia hemisphaerica | exon |
| TCONS_00057401-exon-scaffold_288-1491911889:776658..777092 | TCONS_00057401-exon-scaffold_288-1491911889:776658..777092 | Clytia hemisphaerica | exon |
| TCONS_00057401-exon-scaffold_288-1491911889:776348..776584 | TCONS_00057401-exon-scaffold_288-1491911889:776348..776584 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:776348..777092 - |
Blast
The following BLAST results are available for this feature:
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