TCONS_00057399 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057399
Unique NameTCONS_00057399
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2513

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057399 ID=TCONS_00057399|Name=TCONS_00057399|organism=Clytia hemisphaerica|type=transcript|length=2513bp
TTTAGAACATATCaaaaatgtatttgaaaaatgtcttcctcccaaagaag
aaaaatttctaaagtaAAGAAAACAAGTGGCGAGCATCATcaagaagaat
caaatattgtTGCAAATAGATACTCTGTCACCAAGAAACTTGGTAGTGGC
AGCTATGGCACTGTTTTTGTTGTTTCAGATTTGAAAACTTCTGAGGCTGA
aaaagttttgAAGAAGATCCACATTGGTGATTTGGAGCCAAATGAGACGA
TCAGTGCAGTCAGTGAAGCACGTTTGCTTTCTAAGGGTGGTGATTTGGAT
GTTAAACTTCATTCATGGAAGAAATCAGGGAAATCAGTAGACAGGACACT
GGTCTTGACATGGTTCGTCCAGTTGATTGTGGCAGTGCAATATATTCACC
AACGTCGCATCTTGCACAGAGATTTGAAGACACGAAACATATTCTTAAAA
AACAACATTGTGAAAATTGGTGATTTTGGAATATCACGTATATTGGAGGG
TTCAACGGACATAGCGACTACATTTACTGGGACGCCATATTTCATGGCTC
CTGAAATTCTCAAGCACGAAGGTTATAACTCAAAGTCGGACATATGGTCA
CTTGGTGTCATTTTGTACGAGACGTGCACGTTGAAGAAAGCTTTCCAAGG
GAATAATCTGATGGCAGTGATGAAAAACATCGTCCATGGTGATATCCCGA
AACTTCCCTCCAAATTCAATGCTGACTTACATCTCATCTATGAAAGCATG
TTGTGCAGAGATTCCGCTAAACGTTCTTCAGCAACTGAAATCCTCAAAAA
ACCTTACATTATGCAGTATTTGGAGAAACTGAAGTTGAAGTTAAGTGGAA
ACCGCACCATTGATCGTAAGATCGCTAAGCGTGAGGCCATGGAAATAGCG
GACGCGTTATCATCAGGTGAGAAATGCAGTAAATCAAATGTAAAAAGACG
AGGAGATAGACTTTTACCCGGGTTGAATAATAACCAACGACCGTTGACGC
CCAAAGAATTAATGAAAATACGCAAACAGCAGCGCGCTGACGAagaatta
gaaaaattaaagaaactGACTGTGAAAACTTACGCGGAGAGTAGAAGGGA
ATGCACTGATATCAAAAATCGACTTGAACACGCTTCTGTTGAGGATGAGA
AAGATGAAAATATCCACAGCTCTCCGAGAGAGAATAATCGAGACGATGAT
AAACTTTGTAACATAGAAATGAATATCATTGAAGCTACAGAGGACGAGAG
AAGGAGAAATTTACCTTTCAAAAGAGACGACAGTTTAGAAGTCTGCGAGC
TTCCAGCTGATGATGTATTTGAGTGTGGTGGGGGTGACGAGCGGGTGAAA
GAAGATCGCGCGCATATTTACACGCATTGTTTTGGTGAAGAGGAAGAAGA
AACTCAGCATCACatgAGAAAATACACTCATTGTTTTGGTGCAAGTAGCT
CTGAAGATGAACAAGATTGTATTTCGAACACATTGGTGGTGGACCAAAGC
GAAGATGGAGTGTTTAGTGGAGAAGAAGACGAAGATGTTGGTGATGATAC
GAACGACCTAACAAACGTCAGCTCCATACCCGAAAGCGCCGACCTTGCCG
ACACGTATTACTCAAATTATGACGATTTCGAATCCGATGTCAGCAGTGAC
GATGATGATGAGGAACTCTCTGCCTCTGACGAAAGCGACGCTGACGGGAA
AACGTCAGGTGATTATGATGCCCTTGTCGGTTGTATGGAAAACGCTTTAG
ATCTTTCAGAGGAAGATGTACAATCCACATTCGGTGACAGTTTGCCGTCG
CTTAATGCGACATCCAATGGATTACCCATTCGTCAACAGAAAATACTAAA
GTTGAGAAAGGAATGTATTGGTTTACTTGGCGAGGAAGGCTTTCACAAAG
TGTACGAATATCTGGACAAAGTTCGTTTCTCAGGGCAACGCACTGTCAGT
GAGGATACCATTATGAAAAGATTGCGTAAGCTTGTCGGTTCGTCACGTGA
TTGCTTTTTGGTCGACCAGTTGTTGTTTTTGGAGAAACAAAATGAAATCT
TCGACGAAACGTTTTAAATATGATGACGTGAAATAATTAAGGCTTTATTC
GTTTAAGCTTATCTCACCTATGTTGACTATACCATACTCCCGCATCGAAT
CTCAGATTAATCTGTCGTCCAGAGAAAATTTGGGACataagaatttttaa
aatttggataTTACGAGACCATTCTTACGTGTTTTTCACTGTCGGTTTTT
GTAAGCATCATTCTTTCTCTTGTAAGAACTTGGATTTCCAAAATCTTTTG
ACAAAAGAAAGGACTCAAGTACATCCGTCATTGGTTACATCTTATTGCAT
TTTTAATAGCTAACTAgctatttttttagaatttaggaactattaatatt
ttattaaaatatggaattaattttgtatataaaatgtgtgatttttgata
tttttttttaactttcattttgtaaaaataggCTAATTTTATCTTGAAAC
TAGAGTGTGTaca
Run BLAST on NCBI

transcript from alignment at scaffold_288:734275..740857-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057399 ID=TCONS_00057399|Name=TCONS_00057399|organism=Clytia hemisphaerica|type=transcript|length=6583bp|location=Sequence derived from alignment at scaffold_288:734275..740857- (Clytia hemisphaerica)
TTTAGAACATATCAAAAATGTATTTGAAAAATGTCTTCCTCCCAAAGAAG AAAAATTTCTAAAGTAAAGAAAACAAGTGGCGAGCATCATCAAGAAGAAT CAAATATTGTTGCAAATAGATACTCTGTCACCAAGAAACTTGGTAGTGGC AGCTATGGCACTGTTTTTGTTGTTTCAGATTTGAAAACTTCTGAGGCTGA GTAAGCTATTATTAGATTCAATAAAGAAAATATTTTTGCTTCAAAGATCT TTAATTACAGTATATTTTGATTTCTCCCTATTTTAGAATATTTCAGCACT TTCCGGGTTAATTAAGATTGATTCTTTCTAAAGGCTCGAAATTTCTACTA CTTTTAGATAAATGATATTTTTAAGCAGAGAAATTTGGGGAGCAAAGGAG CTGTGTATACCCTTACTAAAGAAACTGGAGGCTTTGGGGTCTCTTCTGGC TGCTAGCATTATAATGTTACTATAACATGTTTTCTTCTTTCTTTTCTCAT CGTTAACTTTTGTGTTATTTTTTAGAAAAGTTTTGAAGAAGATCCACATT GGTGATTTGGAGCCAAATGAGACGATCAGTGCAGTCAGTGAAGCACGTTT GCTTTCTAAGGTATGTTGGGATATTTTTGATAATATGATGGGTGTAAGCG GTTTTAGTCACTCCAGCAGGCTGCATCATTTGAAAATTCCAGGCGTGTGG TCAATTACACTTGTGTGTGTGATAAGCAGTGCTATGCACAACTTTTAGTT GTGAAAGTAACTTTATGGGGTATGATTGATCGCACTCCTCGTATACATTG CATTGCACATTTACTTACATTTTAGGTGAGTGGGGAGGTGTGCGTGTGCT ATCGCCCGCCTCGAAAGATGCAGCTTGCTCCAGCTAGAAAGCTAAAATAT GATGAAAAAAACAAATCTTGAAATTAAAAGCTTTTTGTAATTGTAAATAT TACGTTATTTTCTTCTCAGCTTGACCATCCTGGTGTTGTAAGATTTCATG ATAGTTTCATTGACCGAGAATTCTTCTGTATCATCACAGAATTTTGTGAG GTGAGTGTCTACATTATGACTGGCAGCTGATTCAGCATGACTAAACTATG ACCAATATTCCCAACGACAGTTGAGCTAGAATCTGAGAATGTCTGTCCAA AAAAACTTTAGGCCAATTGAATATCTTACTAACTAAGGGTTGCTCTCCTC GCGAAAGGATTATTTGTCTTGTACCTTTCCAGTGCTCTTTGATTGTTAAG GTCTACAATTTATTCTCTACTATTTCTTAGGGTGGTGATTTGGATGTTAA ACTTCATTCATGGAAGAAATCAGGGAAATCAGTAGACAGGACACTGGTCT TGACATGGTTCGTCCAGTTGATTGTGGCAGTGCAATATATTCACCAACGT CGCATCTTGCACAGAGATTTGAAGACACGAAACATATTCTTAAAAAACAA CATTGTGAAAATTGGTAAAAGACTTTCTTAATCAAAAATGAATTTTGAAA TAAGAGAAATTGAGACTTATAAAAGCCAGGAAATTGTGTTTGATCTTTCA CCTACAAGTAAAGTTTTGTACTACAAAGTCATTGGTTTCTTAGTTTCATT TGTAATCGTTAAAATTTAAAAGTGGATCTTTGACCACTATTATTTTTGTT ATTATTGTTTTCTCTTTTTCATTTATTTTACCAAGTTTACCCTTAACTTG ATTATTTTCAGGTGATTTTGGAATATCACGTATATTGGAGGGTTCAACGG ACATAGCGACTACATTTACTGGGACGCCATATTTCATGGCTCCTGAAATT CTCAAGCACGAAGGTTATAACTCAAAGTCGGACATATGGTTAGCCTGGTT TTTATTCCTCTTTTAAGTGGACTATAAAATATCTCAAGTTTCATGTGGGA TAAGTAATAGCATAGAAGCTTTGTTATGGGGTACTTATTTGTTACGATGA CACTTAATGATATTTTATTTAGTCAGTGACTTAATTGGTTGCAATACTGA TTGCAAGAATTTTATGTTTTCTTTGACACGAAAACCGTCATCAATCTTGA AATTATTTTAGCTTTCTCATGATTCTTTTTGAAGGTCACTTGGTGTCATT TTGTACGAGACGTGCACGTTGAAGAAAGCTTTCCAAGGGAATGTAAGTAC AACAAAATTGTTCATTAAATTTCTACTAGAAAGATACTTGGTCTAACTGT GGCCACTTTAATTTCAAAAAGCTCTCCCAAATCTTCTCAAAAAGTATACA CGTTATACCAAAGAGGGTTTATCGGAATATTCGTCAATAATGCTACGATT TCAAAAGATTTGTAGTGTAAATGAGGCTCGTACAACCTATTTGATATTTT AACACTTATTTTGTTGAAATTATAGAATCTGATGGCAGTGATGAAAAACA TCGTCCATGGTGATATCCCGAAACTTCCCTCCAAATTCAATGCTGACTTA CATCTCATCTATGAAAGGTACCAAATGCAGTTTTCATAGCTCCATGTATT ACAATTTCCAATTCTGAAATTTCCCAAAAGAAGATGACTCGTTACCTTTA AGGACCTGATTTTGGCGAGAAAAATTCACCAAAATTAAAATTTGCCTTGC CAAAAGCATAGTATAAACTTTTTCACAAAATTCCCAAATAAATTGCCCCT GATTTCGCCAAATTTGAGAAATTGTCATAAGTCGAAAAAATAAGTGCTCA TCAATTTATTTTTACGATTTTTACGTTTTTGCTCCTCCTCAAAATTAATT ACGGTACCTCAGAGCAGCAGTATCGCTTCTTTATTTGAAGGGAGAAAGAG TGCCTATTTTCGGGTAAAAAGCTATCAAAAGAGGAGCCTCCCGCTCGCCT CCGACTACAAACTTACTTAATTTTCAAAGACTAGGTTTCACTCTCCTGAA AGACACGAAGAAGTAAAAGTGTGTTCTTTCTGTAATATTCCTTTAATACC TTTTGTTTCTTCGTAGCATGTTGTGCAGAGATTCCGCTAAACGTTCTTCA GCAACTGAAATCCTCAAAAAACCTTACATTATGCAGTATTTGGAGGTAAA GTGAAAAAAGAAAGCTCTGTAATTCGAACTGAAACAACATCACATTAGAA AGAATACTGTGTTCGATCTGTGTTTTAAATAGAGAACTGTTGAGCAATGA AACAGATTGGTGTGTGGAGGTCATCTTTTTAAAGATAATCATAGTGGGTA ATTTTTGATTCATCATTCATTTGAATCAAGGAATTTTGTTTGAATCAATT TTTCTTTAGTTATTCACGATAATTTCGATTAAAAAATATCATACTAATTT AGATCGTGGCTAAAAGAGTTAGTTTCTCAAATGTTAAATGATATTGATGA TATAAGATGTTTTTTTTCTTTCCATACTAACTTATCTATTGCTGAATCTT TTGTTATTGATTTCCATGAAATTTCCCAATCTCTTCATTTTCAGAAACTG AAGTTGAAGTTAAGTGGAAACCGCACCATTGATCGTAAGATCGCTAAGCG TGAGGCCATGGAAATAGCGGACGCGTTATCATCAGGTGAGAAATGCAGTA AATCAAATGTAAAAAGACGAGGAGATAGACTTTTACCCGGGTTGAATAAT AACCAACGACCGTTGACGCCCAAAGAATTAATGAAAATACGCAAACAGCA GCGCGCTGACGAAGAATTAGAAAAATTAAAGAAACTGACTGTGAAAACTT ACGCGGAGAGTAGAAGGGAATGCACTGATATCAAAAATCGACTTGAACAC GCTTCTGTTGAGGATGAGAAAGATGAAAATATCCACAGCTCTCCGAGAGA GAATAATCGAGACGATGATAAACTTTGTAACATAGAAATGAATATCATTG AAGCTACAGAGGACGAGAGAAGGAGAAATTTACCTTTCAAAAGAGACGAC AGTTTAGAAGTCTGCGAGCTTCCAGCTGATGATGTATTTGAGTGTGGTGG GGGTGACGAGCGGGTGAAAGAAGATCGCGCGCATATTTACACGCATTGTT TTGGTGAAGAGGAAGAAGAAACTCAGCATCACGTAAGGAAAGAATTTTTA GCGTCATAACACCCCCTTCTCGCAGACCCGGTGGGATTTTATCTTTAAGT GAATGAAAAAATAACCAACCACAAGTCGATGGGTAAGAAGAAGAAGAAGA AACTAAATATTCCCATTTTTTATGGCTGGGGATTTGAATTCCATTGTTTT TTAGCCAGGAAATTCAGTGTGGATGGAAAAAGTAGCACAATATATTGCAG TGAGGATTTGCTCATCTGATTATTTTGAGCGGAAACAAAACTTAGAGTAT AATTTTCCACCGGGGACGATATTTTGACCAATTTTTCCAGTGGAAGAGTT TCTAATAGTTTGTGAGAAGTGGGTGTGTTATAGTCATTCCTAGTTCTTTT ATTTGAGCATACCCTTGTTGAAATAATCCTAGTTTAACAGTAAAGGCCGG TCTCCATTTGCGCGAGCTTCAATCGCACTCTTTCGAGCAAATCTTTCACG CTATTGGTCAAAAGAAAAATGAAGTAACTCCATTGGCGCGATCTTACGTA ACGGTTGAAAAAGTTGAAATGTATTCAACTTTTTTTTCGAGCGTGTGCTA CATTTTTATGACGTAATCTTTTTTCCGAGCCAAAAGAATTGAAGCCAAAA GTTGCGATCGCAGCGCGCGCAAATGGAGACCGGCCTTAACATATTTTTAT CCTCCAGTATGATTACTTATAATCGACTACACACCAGTTTTGATTGAATA TAACGGCAATATTAATCAAAACGTAAGGATTTTTTGTCTGTTTTTTTTTC TCAGATGAGAAAATACACTCATTGTTTTGGTGCAAGTAGCTCTGAAGATG AACAAGATTGTATTTCGAACACATTGGTGGTGGACCAAAGCGAAGATGGA GTGTTTAGTGGAGAAGAAGACGAAGATGTTGGTGATGGTAAGATATCTTC TAGCTGCCAAATAGTTCTCTCATTGGTTGATTTTCCACTAAAAGGTCATC AATATGAGAAATTCCTTGGTATTTTTTCCCCAGGGAAATCTCATTTTCGG ACGACTAGGGACACTGTCTTATTTGTATCTCCTGGATCCCTCCGCCGCCG CTTAAAATTGTATGATTTATTGGGTAGCAGAAAGCCTAAGATATCACATG ATGATTTTGTCATGAACTGGTCATGAAATTTAGAGAAATATATCGTACCT TCTCTTTGCAGATACGAACGACCTAACAAACGTCAGCTCCATACCCGAAA GCGCCGACCTTGCCGACACGTATTACTCAAATTATGACGATTTCGAATCC GATGTCAGCAGTGACGATGATGATGAGGAACTCTCTGCCTCTGACGAAAG CGACGCTGACGGGAAAACGTCAGGTGATTATGATGCCCTTGTCGGTTGTA TGGAAAACGCTTTAGATCTTTCAGAGGAAGATGTACAATCCACATTCGGT GACAGTTTGCCGTCGCTTAATGCGACATCCAATGGATTACCCATTCGTCA ACAGAAAATACTAAAGTTGAGAAAGTAAGTAATCATTTAGTGATTCGTCG TTAAAAGGAGGTTTACCCTGCACAATAATGCAATAATTTTTCTACTGTAT ATAATATAACTGCCAAATGACTTGAAATGGTCTTTTAATGTTTAACGTGT TGACCATGATACCCCTGCCTCAGCTGTCCTCGGCTGTCCTTAGTGACCCT TAAGGAATTCTTTGCTCAGTGAGAGTGTGCTAATGAAAACAGCTATTTTT GGGGGATTTCAGATTCTATTGTTTACAGTCCTTAGATTTAGTGGATCTTT AAGTTAGTGGATGAAATTCAAGGGATGAATCAATCTATATTTTTCGAAAG AGGTTTGTGGAATGGGGATGTCTAAAGGAACCTATCATTAACACTTTATG TTTTCATCTGAACTAAATTTCATTTCCAGGGAATGTATTGGTTTACTTGG CGAGGAAGGCTTTCACAAAGTGTACGAATATCTGGACAAAGTTCGTTTCT CAGGGCAACGCACTGTCAGTGAGGATACCATTATGAAAAGATTGCGTAAG CTTGTCGGTTCGTCACGTGATTGCTTTTTGGTCGACCAGTTGTTGTTTTT GGAGAAACAAAATGAAATCTTCGACGAAACGTTTTAAATATGATGACGTG AAATAATTAAGGCTTTATTCGTTTAAGCTTATCTCACCTATGTTGACTAT ACCATACTCCCGCATCGAATCTCAGATTAATCTGTCGTCCAGAGAAAATT TGGGACATAAGAATTTTTAAAATTTGGATATTACGAGACCATTCTTACGT GTTTTTCACTGTCGGTTTTTGTAAGCATCATTCTTTCTCTTGTAAGAACT TGGATTTCCAAAATCTTTTGACAAAAGAAAGGACTCAAGTACATCCGTCA TTGGTTACATCTTATTGCATTTTTAATAGCTAACTAGCTATTTTTTTAGA ATTTAGGAACTATTAATATTTTATTAAAATATGGAATTAATTTTGTATAT AAAATGTGTGATTTTTGATATTTTTTTTTAACTTTCATTTTGTAAAAATA GGCTAATTTTATCTTGAAACTAGAGTGTGTACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036159XLOC_036159Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057399-exon-scaffold_288-1575043694:740658..740857TCONS_00057399-exon-scaffold_288-1575043694:740658..740857Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:740248..740332TCONS_00057399-exon-scaffold_288-1575043694:740248..740332Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:739394..739577TCONS_00057399-exon-scaffold_288-1575043694:739394..739577Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:739020..739146TCONS_00057399-exon-scaffold_288-1575043694:739020..739146Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:738716..738773TCONS_00057399-exon-scaffold_288-1575043694:738716..738773Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:738391..738482TCONS_00057399-exon-scaffold_288-1575043694:738391..738482Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:737813..737891TCONS_00057399-exon-scaffold_288-1575043694:737813..737891Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:736826..737413TCONS_00057399-exon-scaffold_288-1575043694:736826..737413Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:735921..736053TCONS_00057399-exon-scaffold_288-1575043694:735921..736053Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:735334..735646TCONS_00057399-exon-scaffold_288-1575043694:735334..735646Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1575043694:734275..734928TCONS_00057399-exon-scaffold_288-1575043694:734275..734928Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:740658..740857TCONS_00057399-exon-scaffold_288-1510915933:740658..740857Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:740248..740332TCONS_00057399-exon-scaffold_288-1510915933:740248..740332Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:739394..739577TCONS_00057399-exon-scaffold_288-1510915933:739394..739577Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:739020..739146TCONS_00057399-exon-scaffold_288-1510915933:739020..739146Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:738716..738773TCONS_00057399-exon-scaffold_288-1510915933:738716..738773Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:738391..738482TCONS_00057399-exon-scaffold_288-1510915933:738391..738482Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:737813..737891TCONS_00057399-exon-scaffold_288-1510915933:737813..737891Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:736826..737413TCONS_00057399-exon-scaffold_288-1510915933:736826..737413Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:735921..736053TCONS_00057399-exon-scaffold_288-1510915933:735921..736053Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:735334..735646TCONS_00057399-exon-scaffold_288-1510915933:735334..735646Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1510915933:734275..734928TCONS_00057399-exon-scaffold_288-1510915933:734275..734928Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:740658..740857TCONS_00057399-exon-scaffold_288-1491911889:740658..740857Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:740248..740332TCONS_00057399-exon-scaffold_288-1491911889:740248..740332Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:739394..739577TCONS_00057399-exon-scaffold_288-1491911889:739394..739577Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:739020..739146TCONS_00057399-exon-scaffold_288-1491911889:739020..739146Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:738716..738773TCONS_00057399-exon-scaffold_288-1491911889:738716..738773Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:738391..738482TCONS_00057399-exon-scaffold_288-1491911889:738391..738482Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:737813..737891TCONS_00057399-exon-scaffold_288-1491911889:737813..737891Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:736826..737413TCONS_00057399-exon-scaffold_288-1491911889:736826..737413Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:735921..736053TCONS_00057399-exon-scaffold_288-1491911889:735921..736053Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:735334..735646TCONS_00057399-exon-scaffold_288-1491911889:735334..735646Clytia hemisphaericaexon
TCONS_00057399-exon-scaffold_288-1491911889:734275..734928TCONS_00057399-exon-scaffold_288-1491911889:734275..734928Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_288supercontigscaffold_288:734275..740857 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
4.81357 4.60592 11.1191 16.0661 82.8654 66.4168 28.15 25.224 26.0848 26.8277 20.5125 19.6685 5.0715 3.14303 3.49687 3.8838 6.70281 6.60744 3.24554 5.29751 5.63502 6.03767 7.62444 7.34217 5.45261 4.27588 8.55937 6.01172 5.38147 5.06964
Blast
BLAST of TCONS_00057399 vs. Swiss-Prot (Human)
Match: NEK11 (Serine/threonine-protein kinase Nek11 OS=Homo sapiens GN=NEK11 PE=1 SV=2)

HSP 1 Score: 298.13 bits (762), Expect = 5.404e-89
Identity = 160/369 (43.36%), Postives = 236/369 (63.96%), Query Frame = 1
Query:  106 IVANRYSVTKKLGSGSYGTVFVVSDLKTSEAE--KVLKKIHIGDLEPNETISAVSEARLLSK---------------------------GGDLDVKLHSWKKSGKSVDRTLVLTWFVQLIVAVQYIHQRRILHRDLKTRNIFLKNNIVKIGDFGISRILEGSTDIATTFTGTPYFMAPEILKHEGYNSKSDIWSLGVILYETCTLKKAFQGNNLMAVMKNIVHGDIPKLPSKFNADLHLIYESMLCRDSAKRSSATEILKKPYIMQYLEKLKLKLSGNRTIDRKI-AKREAMEIADALSSGEKCSKSNVKRRGDRLLPGLNNNQRPLTPKELMKIRKQQRADXXXXXXXXXTVKTYAESRRECTDIKNR 1122
            ++A RY + +KLGSGS+GTV++VSD K    E  KVLK+I +G+L PNET+ A  EA+LLSK                           G DLD K+  +K++GK      ++ WF+QL++ V Y+H+RRILHRDLK++N+FLKNN++KIGDFG+SR+L GS D+ATT TGTP++M+PE LKH+GY++KSDIWSL  ILYE C +  AF G+N ++++  IV GD P LP ++  +L+ I ESML ++ + R SA EILK PY+ + L+ L  + S     D+ +  ++EA  I +A+           KR   + L  L+  Q+ +TP+E M++RK Q ADE+  KLKK+  + Y E+ +   ++++R
Sbjct:   24 LIARRYVLQQKLGSGSFGTVYLVSDKKAKRGEELKVLKEISVGELNPNETVQANLEAQLLSKLDHPAIVKFHASFVEQDNFCIITEYCEGRDLDDKIQEYKQAGKIFPENQIIEWFIQLLLGVDYMHERRILHRDLKSKNVFLKNNLLKIGDFGVSRLLMGSCDLATTLTGTPHYMSPEALKHQGYDTKSDIWSLACILYEMCCMNHAFAGSNFLSIVLKIVEGDTPSLPERYPKELNAIMESMLNKNPSLRPSAIEILKIPYLDEQLQNLMCRYSEMTLEDKNLDCQKEAAHIINAMQ----------KRIHLQTLRALSEVQK-MTPRERMRLRKLQAADEKARKLKKIVEEKYEENSKRMQELRSR 381          
The following BLAST results are available for this feature:
BLAST of TCONS_00057399 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
NEK115.404e-8943.36Serine/threonine-protein kinase Nek11 OS=Homo sapi... [more]
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