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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057340 ID=TCONS_00057340|Name=TCONS_00057340|organism=Clytia hemisphaerica|type=transcript|length=2119bp
gtgcaattgagaggatttcccagactgacaTTAGGTAGTTTcgtaaataa
taaaatttaattAGTCTATATTTCATGGATAAGAGAGGGTCAGTTTAAAT
GCAGGATAGACAACCTGACTGTATTGGTTGAGCTTTTATGTCTGAAGATT
TTCCTTGATACTTACTTAtggaactttttgaaattttaaacataatATAA
ATCAGTAATAATCTATCTTTGAATTtacttaaaacatttttttgaatatt
ttttgtttcaacAAGATCAATGGTTTGGTTCTGGATTTTAGTCAGCTAAC
TTTAAAATATGATTTCTAATCAAATGAAATGTTTTGTATTTAGAGGCTTA
ATCAAATCAGTGTATACCATgaataaattaaaaagtttttttgaaaaaaa
gaaactaGACAATAAATTCAAGCAGGCTGGATCTGGGCACACACTCAGTG
AAAGCCGTTCACAAGATGCCGGGTCATCAAGAGCTCAGTTACCAACTCAA
CGACAAATTCCATCATCTGGAGCAAGTAGAGCTGGAGAAGCTGCTTTAGC
CAGGTTACAACAGCAACATGGTCAACCCAAAAAACCATCCTCGAGTACTG
CAACATGGAAACACAAATCAGAAGCAGAAAAAATGAAGCAGGAAATGCTT
GCATCAGATAACGCGACAGTACCAATTAAAAAACCAGCAACCATTGTCAA
AGATCACTCGCTTGCAGTTGATGGATTGTTTTACACTTGTCCTGTATATC
CTGCTTGCTTACCTTGGGGTGAAATTCATGATCATCTTCGTCAATGTTTG
TTGAGAGAGCTTCCAGATGAACCGCTTATGATTTCTGTAACCATGATCCA
TACGTTGAACCGAGACAAAGTCAAAAAGGAAGCTTGCATTACTATCTTAA
CTAAATACATACAGAATATATTGGATCATCCTGGAGAGGAAAAATATAGG
AAGATACGAAAAGGAaataaagtttttcaagaaaaagttcAACCTATAAT
CGGTGTAGAAGAGTTCCTTACTAAAGGTGCTGGATTTCAATTACAAACTG
TTGATAACTCAGAAGCAGGCACCTCTGAGGAGTTTTATGTGATGAGTGAA
GAGATCGCATCAAATATTGAGCAAATTCAAATTGCTAAAGAGATGCTTGC
TCAAGCTGAAGGTCTTGAAATTATCCTTGATCGTAATTTAAAAGTGTTTA
CTGCATCTTCCAAAGCAAGTCAAATGAAAGTCCCTGATTCCTTTTTCAAC
GTTAGCTCAGATGAAGTTAAACAAACTCAGATGGATATCACCAACACTGT
TGAAAAATCCAAAGAATTACGCACTAAAGCAATGCGAGATGCTGATAACG
GACCGAAGCGTATTTACAGATACTGTATAATCAGGGTCAGATTTCCTGAT
GGACTTATCATTCAAGGTACTTTTAAAGCAAGTGAAAAATTATCAGATGT
TAAGAATTTTGTTCGAGAAAATTTAGCGTTGGATTGGTTGCCTTTTGATG
TTGTGGATACTATTGGGAAGCCTTTTAGTAAAGAAACAGAATCACTTTCA
TCATTAAAATTGACCCCTGCAGCATTGTTGAATTTTCGCATTGACCAAAA
CGTGATGAATGAAATAGCCGCCTCATCTCAAGGGGGGCAAGTACGTTTTT
TGAAAGGAGATGTTATGATTCTATTGCAAGAGCTATAATGAATAAAAgtg
caatttctttttcatcgtACAATTACAAGATGGAACGAGACGAGCCATGA
CAAACTTTTAGTGATACAGAAACTTTAGAATCTCTTTTTATCAGATGAAC
ACTGAAGACATTTATTATATAAATTGCCATTTGAAATGAATGATATGATG
AAACCTGAGATATAAGATTGTTCACATTGGTTTTGTTTGGACATTCCAAC
AGCATTCATTGActgaagtttaaaaaaataacccGAATGAACctgaaaga
aaaggaaaaatggAATTTATTTCATATCATATTCTGTAGAGAATACTAGT
ATTATTTTTGCATCTTTCAATACACGATGTAGTTTTAGTTTCAGTTTTTG
AATTTAACctgtaatttatttttgaatacgATATTTATTTTAGAATAAAT
ACATAACGTCTTATGAAAC Run BLAST on NCBI protein sequence of TCONS_00057340-protein >TCONS_00057340-protein ID=TCONS_00057340-protein|Name=TCONS_00057340-protein|organism=Clytia hemisphaerica|type=polypeptide|length=459bp
MISNQMKCFVFRGLIKSVYTMNKLKSFFEKKKLDNKFKQAGSGHTLSESR
SQDAGSSRAQLPTQRQIPSSGASRAGEAALARLQQQHGQPKKPSSSTATW
KHKSEAEKMKQEMLASDNATVPIKKPATIVKDHSLAVDGLFYTCPVYPAC
LPWGEIHDHLRQCLLRELPDEPLMISVTMIHTLNRDKVKKEACITILTKY
IQNILDHPGEEKYRKIRKGNKVFQEKVQPIIGVEEFLTKGAGFQLQTVDN
SEAGTSEEFYVMSEEIASNIEQIQIAKEMLAQAEGLEIILDRNLKVFTAS
SKASQMKVPDSFFNVSSDEVKQTQMDITNTVEKSKELRTKAMRDADNGPK
RIYRYCIIRVRFPDGLIIQGTFKASEKLSDVKNFVRENLALDWLPFDVVD
TIGKPFSKETESLSSLKLTPAALLNFRIDQNVMNEIAASSQGGQVRFLKG
DVMILLQEL Run BLAST on NCBI transcript from alignment at scaffold_288:718419..723632+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057340 ID=TCONS_00057340|Name=TCONS_00057340|organism=Clytia hemisphaerica|type=transcript|length=5214bp|location=Sequence derived from alignment at scaffold_288:718419..723632+ (Clytia hemisphaerica)
gtgcaattgagaggatttcccagactgacaTTAGGTAGTTTcgtaaataa
taaaatttaattAGTCTATATTTCATGGATAAGAGAGGGTCAGTTTAAAT
GCAGGATAGACAACCTGACTGTATTGGTTGAGCTTTTATGTCTGAAGATT
TTCCTTGATACTTACTTAtggaactttttgaaattttaaacataatATAA
ATCAGTAATAATCTATCTTTGAATTtacttaaaacatttttttgaatatt
ttttgtttcaacAAGATCAATGGTTTGGTTCTGGATTTTAGTCAGCTAAC
TTTAAAATATGATTTCTAATCAAATGAAATGTTTTGTATTTAGAGGCTTA
ATCAAATCAGTGTATACCATgaataaattaaaaagtttttttgaaaaaaa
gaaactaGACAATAAATTCAAGCAGGCTGGATCTGGGCACACACTCAGTG
AAAGCCGTTCACAAGATGCCGGGTCATCAAGAGCTCAGTTACCAACTCAA
CGACAAATTCCATCATCTGGAGCAAGTAGAGCTGGAGAAGCTGCTTTAGC
CAGgtatagtattttttaaagtgCAGGTCAAGCAAAAAGCCATGTCCAAG
TCAGTTTCTTTATGGCTTCAAGCTTGGCCTAGGGTCCTAGCCCCCCTGCC
AAaggtcccccctgagaacaaggtcccccNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNattatacactggatatacaagtaa
cagatttttgctgatttctcgtgtactagctatgtccgcagtaatgatag
tattgttcactctccttccctcatcaaattatctttcatgccttgattga
agaaaaaaatttgtgatttttttttgatttttgaaaaaaatgttttgaat
ttttttgcttccggaatttttagaaacctaacattttaagtgaaaaattg
aaaaatctgctcacttagtacaccaatTCCTActaaaatcgacaattttg
ggctcaggcaccacccatgttgcagttagtccactggtggagtaactgtt
ttcccaaattttggtttatataccaccacggtagtaattttcatagtgtt
tatataataactgcatgaccccccctggTGAGAGTCgaattcttccactt
aattgataattataagtcgttacgtttcaagctgtgagaaagatgtaaaa
gacgtgttgtgtatataAGAagtttaatgttgacaccggaaattttcaaa
cttcaacctaaaaaaaaaacaccttgccaccacgtgcctccaaaggattt
tcataccacagtggagccaagacactcaagtcttatgtatgttaatttca
gctcttctgggaaCAGTCTTGGAAAggtatttccaattgaaaattttgtg
tcactTTAAGTATTTTGGCTggatttcttgtctaatgatgtttttctcac
attagatttcacaaatgtatctgGCTCGGAatactagccttactttcaaa
cttttttttctgcaaatgtacaaaaagaaagagctagagaagtttttaaa
aataagactgataaacatttttaaaagtcagacatcttcgagccgccatg
acagttgtcctttgcagacaaagctagaacatcaattgttttctgaaacc
aaggaaatacaatgatcgctctccatcgttttatgagtcgtttatccagt
gtataataaatctttgggtCAAGCAAAAAGCTATGTCCAAGTCAGTTTCT
TTATGACTTCAAGCTTGGCCTAGGGTCCTTGCCCCCtgccaaatttaggt
cccccctgagaacaaggtcccccagcctgataaaactttaggtcccagta
taggatatattttctttcaatatGAATTTTTACCATTTAGTCAATGAAAA
CACAAGTAAATTAGTAGTATCATTATACAACTTATCATGAATTCCATGAG
AAAATTAACATCtagctcaaaatttcaaattcagaaataacataagtttt
cattttctcttgaatGTACATATGTTGAAGTGTGAGAAtccagaaaatct
ttctttaaagtCCATTTTTCACGCTTCTGTGCTGGGGTGAAGcctttaat
acaaaaaaatacaaaattgctNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACCCTTAAAAACTCAACAGA
tctttatattttcaaattttcaaattttcgggaTCTATGAACTTGACAGG
AATGGTACCACacagagaaaaatgagaaatcTTCTATTCTTTTAGGCTTT
TGGCATTCTATTGATATAACATTTCACCCCTAAAGCACCAAATATAGGAA
TGGTTGGATTGCCTCATCAGAACCATTAAAAAACCGttttgtccgttagt
cacgtttttaaatgtccgttagtcacagcgctttttgcccaatttttgtc
atattttcttactttgacaattttttttcaaaattaattttgaaacataa
aattcaaccttttctctagtgaatttaagcaaaaaacccaATCTGTAGCT
TTAGGAACAGCACTTTACAGCTGTTTGTAAAAGTGTCCCATTttagatgt
taatttttgtgtccgttagtcacgggcCTATTTATTGCAATTTCTGACCA
AGTGAAAGTCaagagaaaaagttttatatGGTTCTTGAAACTTTGACCCC
CACTGATAGTTACCACACCAAAAGaagttttattcctattttcaagCTTG
ACTTCTAGCCTGCTAAACAGTGgaaatgtccgttagtcacatatGGAATT
CATGTTATGCACCCTTGCGCTCTTAATTGCCCTCTGAAATAGTGCCAAGA
GgcttaactttttccaaaaaacaaacaaatcaaTAACAACTTAATAAGAT
ACAGAACTTACTTCTGAActgttgttttgttttaaaatatgtCGATCACT
ACAAACTTGTCTTCTTTCAAATCTGCTGTACGCTTGAATGTTTTTGTTTA
GAATTCAAGCTCGACTTAATTGTATTCACTTCTGTGCACTTTTAGAACat
gcaatataattttaaaaattttaaggatcagattacactttaatatttAG
ATTTTGTCCATTTATTCTTTTCAACCAAAGAGACTTGTATTGCGGAAATA
GAATCGTTTATACTATAGAATGTAATCTTCACTCTATCTTACTTCAAGGT
TACAACAGCAACATGGTCAACCCAAAAAACCATCCTCGAGTACTGCAACA
TGGAAACACAAATCAGAAGCAGAAAAAATGAAGCAGGAAATGCTTGCATC
AGATAACGCGACAGTACCAATTAAAAAACCAGCAACCATTGTCAAAGATC
ACTCGCTTGCAGTTGATGGATTGTTTTACACTTGTCCTGTATATCCTGCT
TGCTTACCTTGGGGTGAAATTCATGATCATCTTCGTCAATGTTTGTTGAG
AGAGCTTCCAGATGAACCGCTTATGATTTCTGTAACCATGATCCATACGT
TGAACCGAGACAAAGTCAAAAAGGAAGCTTGCATTACTATCTTAACTAAA
TACATACAGAATATATTGGATCATCCTGGAGAGGAAAAATATAGGAAGAT
ACGAAAAGGAaataaagtttttcaagaaaaagttcAACCTATAATCGGTG
TAGAAGAGTTCCTTACTAAAGGTGCTGGATTTCAATTACAAACTGTTGAT
AACTCAGAAGCAGGCACCTCTGAGGAGTTTTATGTGATGAGTGAAGAGAT
CGCATCAAATATTGAGCAAATTCAAATTGCTAAAGAGATGCTTGCTCAAG
CTGAAGGTCTTGAAATTATCCTTGATCGTAATTTAAAAGTGTTTACTGCA
TCTTCCAAAGCAAGTCAAATGAAAGTCCCTGATTCCTTTTTCAACGTTAG
CTCAGATGAAGTTAAACAAACTCAGATGGATATCACCAACACTGTTGAAA
AATCCAAAGAATTACGCACTAAAGCAATGCGAGATGCTGATAACGGACCG
AAGCGTATTTACAGATACTGTATAATCAGGGTCAGATTTCCTGATGGACT
TATCATTCAAGGTACTTTTAAAGCAAGTGAAAAATTATCAGATGTTAAGA
ATTTTGTTCGAGAAAATTTAGCGTTGGATTGGTTGCCTTTTGATGTTGTG
GATACTATTGGGAAGCCTTTTAGTAAAGAAACAGAATCACTTTCATCATT
AAAATTGACCCCTGCAGCATTGTTGAATTTTCGCATTGACCAAAACGTGA
TGAATGAAATAGCCGCCTCATCTCAAGGGGGGCAAGTACGTTTTTTGAAA
GGAGATGTTATGATTCTATTGCAAGAGCTATAATGAATAAAAgtgcaatt
tctttttcatcgtACAATTACAAGATGGAACGAGACGAGCCATGACAAAC
TTTTAGTGATACAGAAACTTTAGAATCTCTTTTTATCAGATGAACACTGA
AGACATTTATTATATAAATTGCCATTTGAAATGAATGATATGATGAAACC
TGAGATATAAGATTGTTCACATTGGTTTTGTTTGGACATTCCAACAGCAT
TCATTGActgaagtttaaaaaaataacccGAATGAACctgaaagaaaagg
aaaaatggAATTTATTTCATATCATATTCTGTAGAGAATACTAGTATTAT
TTTTGCATCTTTCAATACACGATGTAGTTTTAGTTTCAGTTTTTGAATTT
AACctgtaatttatttttgaatacgATATTTATTTTAGAATAAATACATA
ACGTCTTATGAAAC Coding sequence (CDS) from alignment at scaffold_288:718419..723632+ >TCONS_00057340 ID=TCONS_00057340|Name=TCONS_00057340|organism=Clytia hemisphaerica|type=CDS|length=2760bp|location=Sequence derived from alignment at scaffold_288:718419..723632+ (Clytia hemisphaerica)
ATGATTTCTAATCAAATGAAATGTTTTGTATTTAGAGGCTTAATCAAATC
AGTGTATACCATgaataaattaaaaagtttttttgaaaaaaagaaactaG
ACAATAAATTCAAGCAGGCTGGATCTGGGCACACACTCAGTGAAAGCCGT
TCACAAGATGCCGGGTCATCAAGAGCTCAGTTACCAACTCAACGACAAAT
TCCATCATCTGGAGCAAGTAGAGCTGGAGAAGCTGCTTTAGCCAGGTTAC
AACAGCAACATGGTCAACCCAAAAAACCATCCTCGAGTACTGCAACATGG
AAACACAAATCAGAAGCAGAAAAAATGAAGCAGGAAATGCTTGCATCAGA
TAACGCGACAGTACCAATTAAAAAACCAGCAACCATTGTCAAAGATCACT
CGCTTGCAGTTGATGGATTGTTTTACACTTGTCCTGTATATCCTGCTTGC
TTACCTTGGGGTGAAATTCATGATCATCTTCGTCAATGTTTGTTGAGAGA
GCTTCCAGATGAACCGCTTATGATTTCTGTAACCATGATCCATACGTTGA
ACCGAGACAAAGTCAAAAAGGAAGCTTGCATTACTATCTTAACTAAATAC
ATACAGAATATATTGGATCATCCTGGAGAGGAAAAATATAGGAAGATACG
AAAAGGAaataaagtttttcaagaaaaagttcAACCTATAATCGGTGTAG
AAGAGTTCCTTACTAAAGGTGCTGGATTTCAATTACAAACTGTTGATAAC
TCAGAAGCAGGCACCTCTGAGGAGTTTTATGTGATGAGTGAAGAGATCGC
ATCAAATATTGAGCAAATTCAAATTGCTAAAGAGATGCTTGCTCAAGCTG
AAGGTCTTGAAATTATCCTTGATCGTAATTTAAAAGTGTTTACTGCATCT
TCCAAAGCAAGTCAAATGAAAGTCCCTGATTCCTTTTTCAACGTTAGCTC
AGATGAAGTTAAACAAACTCAGATGGATATCACCAACACTGTTGAAAAAT
CCAAAGAATTACGCACTAAAGCAATGCGAGATGCTGATAACGGACCGAAG
CGTATTTACAGATACTGTATAATCAGGGTCAGATTTCCTGATGGACTTAT
CATTCAAGGTACTTTTAAAGCAAGTGAAAAATTATCAGATGTTAAGAATT
TTGTTCGAGAAAATTTAGCGTTGGATTGGTTGCCTTTTGATGTTGTGGAT
ACTATTGGGAAGCCTTTTAGTAAAGAAACAGAATCACTTTCATCATTAAA
ATTGACCCCTGCAGCATTGTTGAATTTTCGCATTGACCAAAACGTGATGA
ATGAAATAGCCGCCTCATCTCAAGGGGGGCAAGTACGTTTTTTGAAAGGA
GATGTTATGATTCTATTGCAAGAGCTATAAATGATTTCTAATCAAATGAA
ATGTTTTGTATTTAGAGGCTTAATCAAATCAGTGTATACCATgaataaat
taaaaagtttttttgaaaaaaagaaactaGACAATAAATTCAAGCAGGCT
GGATCTGGGCACACACTCAGTGAAAGCCGTTCACAAGATGCCGGGTCATC
AAGAGCTCAGTTACCAACTCAACGACAAATTCCATCATCTGGAGCAAGTA
GAGCTGGAGAAGCTGCTTTAGCCAGGTTACAACAGCAACATGGTCAACCC
AAAAAACCATCCTCGAGTACTGCAACATGGAAACACAAATCAGAAGCAGA
AAAAATGAAGCAGGAAATGCTTGCATCAGATAACGCGACAGTACCAATTA
AAAAACCAGCAACCATTGTCAAAGATCACTCGCTTGCAGTTGATGGATTG
TTTTACACTTGTCCTGTATATCCTGCTTGCTTACCTTGGGGTGAAATTCA
TGATCATCTTCGTCAATGTTTGTTGAGAGAGCTTCCAGATGAACCGCTTA
TGATTTCTGTAACCATGATCCATACGTTGAACCGAGACAAAGTCAAAAAG
GAAGCTTGCATTACTATCTTAACTAAATACATACAGAATATATTGGATCA
TCCTGGAGAGGAAAAATATAGGAAGATACGAAAAGGAaataaagtttttc
aagaaaaagttcAACCTATAATCGGTGTAGAAGAGTTCCTTACTAAAGGT
GCTGGATTTCAATTACAAACTGTTGATAACTCAGAAGCAGGCACCTCTGA
GGAGTTTTATGTGATGAGTGAAGAGATCGCATCAAATATTGAGCAAATTC
AAATTGCTAAAGAGATGCTTGCTCAAGCTGAAGGTCTTGAAATTATCCTT
GATCGTAATTTAAAAGTGTTTACTGCATCTTCCAAAGCAAGTCAAATGAA
AGTCCCTGATTCCTTTTTCAACGTTAGCTCAGATGAAGTTAAACAAACTC
AGATGGATATCACCAACACTGTTGAAAAATCCAAAGAATTACGCACTAAA
GCAATGCGAGATGCTGATAACGGACCGAAGCGTATTTACAGATACTGTAT
AATCAGGGTCAGATTTCCTGATGGACTTATCATTCAAGGTACTTTTAAAG
CAAGTGAAAAATTATCAGATGTTAAGAATTTTGTTCGAGAAAATTTAGCG
TTGGATTGGTTGCCTTTTGATGTTGTGGATACTATTGGGAAGCCTTTTAG
TAAAGAAACAGAATCACTTTCATCATTAAAATTGACCCCTGCAGCATTGT
TGAATTTTCGCATTGACCAAAACGTGATGAATGAAATAGCCGCCTCATCT
CAAGGGGGGCAAGTACGTTTTTTGAAAGGAGATGTTATGATTCTATTGCA
AGAGCTATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057340-exon-scaffold_288-1491911889:718419..718971 | TCONS_00057340-exon-scaffold_288-1491911889:718419..718971 | Clytia hemisphaerica | exon |
| TCONS_00057340-exon-scaffold_288-1510915933:718419..718971 | TCONS_00057340-exon-scaffold_288-1510915933:718419..718971 | Clytia hemisphaerica | exon |
| TCONS_00057340-exon-scaffold_288-1575043694:718419..718971 | TCONS_00057340-exon-scaffold_288-1575043694:718419..718971 | Clytia hemisphaerica | exon |
| TCONS_00057340-exon-scaffold_288-1491911889:722067..723632 | TCONS_00057340-exon-scaffold_288-1491911889:722067..723632 | Clytia hemisphaerica | exon |
| TCONS_00057340-exon-scaffold_288-1510915933:722067..723632 | TCONS_00057340-exon-scaffold_288-1510915933:722067..723632 | Clytia hemisphaerica | exon |
| TCONS_00057340-exon-scaffold_288-1575043694:722067..723632 | TCONS_00057340-exon-scaffold_288-1575043694:722067..723632 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:718419..723632 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005515 |
protein binding |
Blast
BLAST of TCONS_00057340 vs. Swiss-Prot (Human)
Match: UBXN6 (UBX domain-containing protein 6 OS=Homo sapiens GN=UBXN6 PE=1 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 6.801e-67 Identity = 154/426 (36.15%), Postives = 236/426 (55.40%), Query Frame = 3
Query: 378 LKSFFEKKKLDNKFKQAGSGHTLSESRSQDAGSSRAQLPTQR---QIPSSGASRAGEAALARLQQQHGQPKKPSSSTATWKHKSEAEKMKQEMLASDNATVP----IKKPATIVKDHSLAVDGLFYTCPVYPACLPWGEIHDHLRQCLLRELPDEPLMISVTMIHTLNRDKVKKEACITILTKYIQNILDHPGEEKYRKIRKGNKVFQEKVQPIIGVEEFLTKGAGFQLQTVDNSEAGTSEEFYVMSEEIASNIEQIQIAKEMLAQAEGLEIILDRNLKVFTASSKASQMKVPDSFFNVSSDEVKQTQMDITNTVEKSKELRTKAMRDADNGPK-RIYRYCIIRVRFPDGLIIQGTFKASEKLSDVKNFVRENLALDWLPFDVVDTIGKPFXXXXXXXXXX-XXXPAALLNFRIDQNVMNEIAASS 1628
+K FF++ K D KFK AG G L ES + A + P R Q P++ A A AALARL+Q+ + P+S T +++ E ++ E S + P + +P H LAV G+++TCP+ A L + +++ +L +P+ S+ I+T N+D+ + + + + KY+ NI HP EEKYRKI+ NKVFQE++ + G EF + GFQ + + EEFYV+SE + + ++ KE L AE + LDR +VF S ASQ ++P FFN++++E+K+ Q + VE+ LRTKAMR+ + R Y Y ++RVR PDG ++QGTF A E+L V FVRE L DWLPF+++ + G+ S++ + L P+ALL F D V+ +I A+
Sbjct: 1 MKKFFQEFKADIKFKSAGPGQKLKESVGEKAHKEKPNQPAPRPPRQGPTNEAQMAAAAALARLEQKQSRAWGPTSQD-TIRNQVRKE-LQAEATVSGSPEAPGTNVVSEPREEGSAH-LAVPGVYFTCPLTGATLRKDQRDACIKEAILLHFSTDPVAASIMKIYTFNKDQDRVKLGVDTIAKYLDNIHLHPEEEKYRKIKLQNKVFQERINCLEGTHEFF-EAIGFQKVLLPAQDQEDPEEFYVLSETTLAQPQSLERHKEQLLAAEPVRAKLDRQRRVFQPSPLASQFELPGDFFNLTAEEIKREQRLRSEAVERLSVLRTKAMREKEEQRGLRKYNYTLLRVRLPDGCLLQGTFYARERLGAVYGFVREALQSDWLPFELLASGGQKLSEDENLALNECGLVPSALLTFSWDMAVLEDIKAAG 422
The following BLAST results are available for this feature:
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