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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057339 ID=TCONS_00057339|Name=TCONS_00057339|organism=Clytia hemisphaerica|type=transcript|length=4042bp
CTCAATTTCTTTGTTTACTCATTCATAACTTTGTCAACGATGTAGGACAA
ATTTAGTGTGTCAACTTTTTATAGACAGAGGCGACGAGACATTTCTTTCT
GGCAAGATTAAAGGAGGCGTGAGAGACATCGATTGAGCACTTGTTGTAGT
TTATGATCACCACCATTGAAGGCTTTTGAAACTTTAAAACACTGTTCATG
ATAATTGGTGATAAATCCTCGGGCTAACAGGAAATTGAGAGATTATCAAG
CGGAAAAGAAGTGTTGAGATTATAAACTTTTGGTTTTGCGAGTGTTTTTT
GTGTTATTTAACGAATAAATAcattatttttattgatttcacGAATGATG
AATAGTCAAAATACACAACAAACTATCATTTCAGGTGCTAAGACTGAGAC
CATCTTGGAAGAAGAGGCTACTGGTGAAAATACACACGAGTCTGTATCTT
CTGAGGAGGAAGGGGGAAATTCTCCTCTAAACCGAAGCTTTAATATGAAT
CGTCGATCGGAGATCTCGTCAGCTCAATCTACACCGAAAATTGAGAAAGC
TTTGATGAATAGATCCAGTGAGCTGATAAAGGAGTTCGCTCCGCCTTCCA
TGGAGTATAGTTATTATGTTATTGCATCTCCAGTAGTTGGGCGCCGTAAA
GTTTCCGCCACAAATAGCGCCCCATCGTCTAATATGACAAGTAGAAGTTA
TTCATTCGTATCCATGTCTTCGAGGGACTCGCAATCATCATCAGAAGTTT
CGGCTGTTGTTCAGCCACGTAAAAGAGCACCAAAATCACGAGGCTTGTTA
CAGTCTGTTAAAGAAAAACTATTAGCTGAAATTGAGAATATCAATGTAGA
ACTCGTCAAAATGGATTCTGAAAAACTTGTTTTGGTGAATTTACGAAATG
CTTCTTTGCTTTATCGAGATATGATATGTAAATCAGAACGTAATAATCAA
GGGATACCGAATGCTGGTAAGTTACGAGCATCTTGCGAGAGTATCGAGTT
GAAAATACAAGATGAGGAGCATGCATTGCAGGACGATTTAGCGATACCAT
CAATTGATGAAATTCGAAAGGACTTGAAAGAGATTTTAAAAGTCTGTAGC
GTTATTACAAACAATAAATCAACGAATATGAAAATGACTTTAGTTGAGGA
ATTGTTATGTGCTGTTGGAAAGTTGTATGGGGTGGTGGATACTATTTTGG
TGATTTTCTATGAAGATTTGAATGATGATGATTCAGATGATGGTCTTGAG
AATACTGGTGAAAGAGGGGATGAGGTTGACAATGTAGTGGAATGCAAAGA
AAGTGGTGGTGAAATTTCACCAGTTGCTTCGTCGCCAGAGCTGGCAGTGG
ATgAAAGTGAAAACGTAGAGGAGAACCGAGCAAACGAAACCAACAACACA
ACAATAGAATCCATCATCGAAAATCGAACGAACGGAGCACGTGACTCATC
ATTCTGTTTAAAAGGCGACCAATCAGCTTCAAGCATTTCAATCGATTTAA
GCGGGAAAATTGGAGAAGAATTAAAACATCTACAGAAAAAATTATCCAAA
gcgaaaaaacttttcaaagggATAGAAAGACTTTCTTCAGGTAATCCTAA
ACCGAAATCACTTAGCTTGTGTTTTAAAGAAATCAACTCTACGATAACGG
AGGAATTGATTAGAGAGCTAAGCTATGAAGAAGCTTGGTGCCAGGTTATC
AAGAAGAACGTAGTTGATCTTCAGAAACATTTGATGGCAGAGAGACCTGG
TGAAAGAGAACTAGAACACATTAAAATCATCGTCGGTGAACTAACCGGTC
GAATCTCCATAATTATGAAAAGTAATATGTTGGAGTAGCAAATGGTATCA
ATTCTACTGTCGGCTGCCATTTATGTGAAAAGGTTAACAGTTTATTTCAA
GATTCGCTTTAAGTTGAAAAGAAgatcaattcaattcaatgaAATTCCGA
AGGGTATACAGATCAGGTTGATAATTTGTATCTGTTCCCGAATTTAAGTC
AATGATAAACTAAagtcgaaaatattttgatgttgaaAGGATGATTAGCG
AAAAGATGACGTAATGAAAACGATTTTTGGTTGGATAAAATGATTACGCA
TGCTCaagggcaaaaaaaaaacagaaaacaaaaaacaaaagatgtCTACC
GTGTTTTCCAGTTAATCTTTTTTATGTtgtaatattattatataatttaa
attctataaaaataatcatattgtgTAAATTCCTAAAAGTCAACagaaaa
atttgcaataaaaagagacaaaacccTGTAAGACGTTTATAGAAATAAGG
TAAACACTAGCCTTTTCCTTGGATATTCTAAGATAGCAGTTTTGGTTGGC
ACTTTATAACTTTATAATTTCTTTGCTCTTCTAAAAACCTGAGGTTGTTT
TGCGTAAAGACTTCACTTTCATCTGTCCCTAAATTAAGCTTCGATAGCCA
AAGTCTGCTCAGCTTGTAAGATATTGAGGAGATTTCATATTTGTacgtag
aaaaaattaaattatacaCAAAACAAccgataaaaataaattaatgcTAG
AATTAAACAGAAAATGATCTCAAGGCTTCGAGAACATAATCTTGGTTTGA
GAACTCTACCCCTAACTAGTCGACATGCAATACTTTATAGTACAATGTAA
CGATATGGCTCCATTGATTATGTCATTGTGTCAACGTGAGTAGTCNCAGA
GAGCTAAGCTATGAAGAAGCTTGGTGCCAGGTTATCAAGAAGAACGTAGT
TGATCTTCAGAAACATTTGATGGCAGAGAGACCTGGTGAAAGAGAATTAG
AACACATTAAAATCATCGTCGGTGAACTAACCGGTCGAATCTCCATAATT
ATGAAAAGTAATATGTTGGAGTAGCAAATGGTATCAATTCTACTGTCGGC
TGCCATTTATGTGAAAAGGTTAACAGTTTATTTCAAGATTCGCTTTAAGT
TGAAAAGAAgatcaattcaattcaatgaAATTCCGAAGGGTATACAGATC
AGGTTGATAATTTGTATCTGTTCCCGAATTTAAGTCAATGATAAACTAAa
gtcgaaaatattttgatgttgaaAGGATGATTAGCGAAAAGATGACGTAA
TGAAAACGATTTTTGGTTGGATAAAATGATTACGCATGCTCaagggcaaa
aaaaaaacagaaaacaaaaaacaaaagatgtCTACCGTGTTTTCCAGTTA
ATCTTTTTTATGTtgtaatattattatataatttaaattctataaaaata
atcatattgtgTAAATTCCTAAAAGTCAACagaaaaatttgcaataaaaa
gagacaaaacccTGTAAGACGTTTATAGAAATAAGGTAAACACTAGCCTT
TTCCTTGGATATTCTAAGATAGCAGTTTTGGTTGGCACTTTATAACTTTA
TAATTTCTTTGCTCTTCTAAAAACCTGAGGTTGTTTTGCGTAAAGACTTC
ACTTTCATCTGTCCCTAAATTAAGCTTCGATAGCCAAAGTCTGCTCAGCT
TGTAAGATATTGAGGAGATTTCATATTTGTacgtagaaaaaattaaatta
tacaCAAAACAAccgataaaaataaattaatgcTAGAATTAAACAGAAAA
TGATCTCAAGGCTTCGAGAACATAATCTTGGTTTGAGAACTCTACCCCTA
ACTAGTCGACATGCAATACTTTATAGTACAATGTAACGATATGGCTCCAT
TGATTATGTCATTGTGTCAACGTGAGTAGTCAATTGAGATCGAATTTTTT
TACCTGAGTGACCTAAAGGATGTCATAATCACCTTAAAGCTTTATTTTCT
GCTTATTCAGCAAATTGTAAAAGCAAAGTGTTTCTTTAAAAAGTAAAGCA
TATGCAACCTCTACAAAACCAGACTATTCAAAAATATTGATGTAATTATC
GACTTTCGTTTTATTTCGTTGCGAGATGCATTCGGATATCCAAACGATGT
TTCGACATTCTTGTTCCTTCAGTTTGACGTAAGCGTAAAAAACACCGAAG
TGAAATTGTTGCATGAACGAGTTCACGTTCAGTTTGACCtga Run BLAST on NCBI protein sequence of TCONS_00057339-protein >TCONS_00057339-protein ID=TCONS_00057339-protein|Name=TCONS_00057339-protein|organism=Clytia hemisphaerica|type=polypeptide|length=497bp
MMNSQNTQQTIISGAKTETILEEEATGENTHESVSSEEEGGNSPLNRSFN
MNRRSEISSAQSTPKIEKALMNRSSELIKEFAPPSMEYSYYVIASPVVGR
RKVSATNSAPSSNMTSRSYSFVSMSSRDSQSSSEVSAVVQPRKRAPKSRG
LLQSVKEKLLAEIENINVELVKMDSEKLVLVNLRNASLLYRDMICKSERN
NQGIPNAGKLRASCESIELKIQDEEHALQDDLAIPSIDEIRKDLKEILKV
CSVITNNKSTNMKMTLVEELLCAVGKLYGVVDTILVIFYEDLNDDDSDDG
LENTGERGDEVDNVVECKESGGEISPVASSPELAVDESENVEENRANETN
NTTIESIIENRTNGARDSSFCLKGDQSASSISIDLSGKIGEELKHLQKKL
SKAKKLFKGIERLSSGNPKPKSLSLCFKEINSTITEELIRELSYEEAWCQ
VIKKNVVDLQKHLMAERPGERELEHIKIIVGELTGRISIIMKSNMLE Run BLAST on NCBI transcript from alignment at scaffold_288:692067..697571+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057339 ID=TCONS_00057339|Name=TCONS_00057339|organism=Clytia hemisphaerica|type=transcript|length=5505bp|location=Sequence derived from alignment at scaffold_288:692067..697571+ (Clytia hemisphaerica)
CTCAATTTCTTTGTTTACTCATTCATAACTTTGTCAACGATGTAGGACAA
ATTTAGTGTGTCAACTTTTTATAGACAGAGGCGACGAGACATTTCTTTCT
GGCAAGATTAAAGGAGGCGTGAGAGACATCGATTGAGCACTTGTTGTAGT
TTATGATCACCACCATTGAAGGCTTTTGAAACTTTAAAACACTGTTCATG
ATAATTGGTGATAAATCCTCGGGCTAACAGGAAATTGAGAGATTATCAAG
CGGAAAAGAAGTGTTGAGATTATAAACTTTTGGTTTTGCGAGTGTTTTTT
GTGTTATTTAACGAATAAATAcattatttttattgatttcacGAATGATG
AATAGTCAAAATACACAACAAACTATCATTTCAGGTGCTAAGACTGAGAC
CATCTTGGAAGAAGAGGCTACTGGTGAAAATACACACGAGTCTGTATCTT
CTGAGGAGGAAGGGGGAAATTCTCCTCTAAACCGAAGCTTTAATATGAAT
CGTCGATCGGAGATCTCGTCAGCTCAATCTACACCGAAAATTGAGAAAGC
TTTGATGAATAGATCCAGTGAGCTGATAAAGGAGTTCGCTCCGCCTTCCA
TGGAGTATAGTTATTATGTTATTGCATCTCCAGTAGTTGGGCGCCGTAAA
GTTTCCGCCACAAATAGCGCCCCATCGTCTAATATGACAAGTAGAAGTTA
TTCATTCGTATCCATGTCTTCGAGGGACTCGCAATCATCATCAGAAGTTT
CGGCTGTTGTTCAGCCACGTAAAAGAGCACCAAAATCACGAGGCTTGTTA
CAGTCTGTTAAAGAAAAACTATTAGCTGAAATTGAGAATATCAATGTAGA
ACTCGTCAAAATGGATTCTGAAAAACTTGTTTTGGTGAATTTACGAAATG
CTTCTTTGCTTTATCGAGATATGATATGTAAATCAGAACGTAATAATCAA
GGGATACCGAATGCTGGTAAGTTACGAGCATCTTGCGAGAGTATCGAGTT
GAAAATACAAGATGAGGAGCATGCATTGCAGGACGATTTAGCGATACCAT
CAATTGATGAAATTCGAAAGGACTTGAAAGAGATTTTAAAAGTCTGTAGC
GTTATTACAAACAATAAATCAACGAATATGAAAATGACTTTAGTTGAGGA
ATTGTTATGTGCTGTTGGAAAGTTGTATGGGGTGGTGGATACTATTTTGG
TGATTTTCTATGAAGATTTGAATGATGATGATTCAGATGATGGTCTTGAG
AATACTGGTGAAAGAGGGGATGAGGTTGACAATGTAGTGGAATGCAAAGA
AAGTGGTGGTGAAATTTCACCAGTTGCTTCGTCGCCAGAGCTGGCAGTGG
ATGTGAGTATAGTTGGATTTATTTATATTCTGAAAGTACATATTTAGTAA
ACAGTGCCTGTCTATGTACAGATATTTACAAAACATGATTTCTAACCTTA
AAAGGTAAAGtattatttgacattttttctcTAGGCAGCTCGATACGGTG
AGGTTTATTCTGTTCACACTTTCGAAATTCGAACCCCGTCTAAAACGGTG
AAGATCATAGACATTTAATCAGTTCTACAGCTAAAAAATTCAACAAGCTT
TATACGGTCGGTTTGCAAAGATTAAAAATGAAATGGAAAAGTTGTGGTAA
CAAAGTTGTTTTTCCGTCCCCTATTAGAAATTCCCTTTAATGCGGATTCT
TTTCCGCCATAAGGAAGATTTGAGATCGAGGAAGTAGGATCAATAACGTT
TGtctgaatttttattttcaaagtatAATCATATaactttataatttgaa
aaaagtttaacattGAGGTCATTTTATCCCCTCATTTCGAAAGTCTAGTC
CAAAATGTTTAATCCTTCCAACCTTGAACGTGTCTTGatatttgatttga
atttctcgagaaAGCTCTTAAGTTTTAAACATTTCATCATATGGTTTTAA
AAACCAAGACAACCGAAAGAAATCTAATCCCAAGGAAACAGACGAGCATA
CTAGCGAACAGTATGCTCTCTAGCAGTTTATTCTTGATTAGTGAGGCGAT
TTATTCCAATATCCAAAATCCAAAAGTAGTATGAAATAATCCAAATTTTA
TGAACTATCAAAATATAcgctattttttgaaagaactTGNTAATGAAATT
CCGAAGCGTATACAGATCAGGTTGATAATTTGTATCTGTTCCCAAATTTA
AGTCAATGATAAACTAAagtcgaaaatattttgatgttgaaAGGATGATT
AGCGAAAAGATGACGTAATGAAAACGATTTTTGGTTGGATAAAATAATTA
CGCATGCTCAAGGgcaaaaaaacaattacaaaaaaacaaaagatgtcTAC
CGTGTTTTCcagttaaatcttttttatgttgtaatattattatataattt
aaattctataaaaataatcatattgtgTAAATTCCTAAAAGTCAACAGAA
AAATTTGNTCTAGCAGTTTATTCTTGATTAGTGAGGCGATTTATTCCAAT
ATCCAAAATCCAAAAGTAGTATGAAATAATCCAAATTTTATGAACTATCA
AAATATAcgctattttttgaaagaactTGAAAAATCACGATAAAAAATTC
ACTAACCATGTTCATACAGACCTTAAGAAGACCTGGAATATGTAGGCTtt
taaaaacactgaaaaaccaGGTTTTTACTCAGCACTCCTAACTCCATGCT
GACTTTTTCTGAGCTACTGTACATTTTAAAATCACCTATCCAGGTTTACT
CATTGGGTCTTTATCCAAACCCTCAATTAACTCATTTTAATTGAActcct
tttaaactttttcaggAAAGTGAAAACGTAGAGGAGAACCGAGCAAACGA
AACCAACAACACAACAATAGAATCCATCATCGAAAATCGAACGAACGGAG
CACGTGACTCATCATTCTGTTTAAAAGGCGACCAATCAGCTTCAAGCATT
TCAATCGATTTAAGCGGGAAAATTGGAGAAGAATTAAAACATCTACAGAA
AAAATTATCCAAAgcgaaaaaacttttcaaagggATAGAAAGACTTTCTT
CAGGTAATCCTAAACCGAAATCACTTAGCTTGTGTTTTAAAGAAATCAAC
TCTACGATAACGGAGGAATTGATTAGAGAGCTAAGCTATGAAGAAGCTTG
GTGCCAGGTTATCAAGAAGAACGTAGTTGATCTTCAGAAACATTTGATGG
CAGAGAGACCTGGTGAAAGAGAACTAGAACACATTAAAATCATCGTCGGT
GAACTAACCGGTCGAATCTCCATAATTATGAAAAGTAATATGTTGGAGTA
GCAAATGGTATCAATTCTACTGTCGGCTGCCATTTATGTGAAAAGGTTAA
CAGTTTATTTCAAGATTCGCTTTAAGTTGAAAAGAAgatcaattcaattc
aatgaAATTCCGAAGGGTATACAGATCAGGTTGATAATTTGTATCTGTTC
CCGAATTTAAGTCAATGATAAACTAAagtcgaaaatattttgatgttgaa
AGGATGATTAGCGAAAAGATGACGTAATGAAAACGATTTTTGGTTGGATA
AAATGATTACGCATGCTCaagggcaaaaaaaaaacagaaaacaaaaaaca
aaagatgtCTACCGTGTTTTCCAGTTAATCTTTTTTATGTtgtaatatta
ttatataatttaaattctataaaaataatcatattgtgTAAATTCCTAAA
AGTCAACagaaaaatttgcaataaaaagagacaaaacccTGTAAGACGTT
TATAGAAATAAGGTAAACACTAGCCTTTTCCTTGGATATTCTAAGATAGC
AGTTTTGGTTGGCACTTTATAACTTTATAATTTCTTTGCTCTTCTAAAAA
CCTGAGGTTGTTTTGCGTAAAGACTTCACTTTCATCTGTCCCTAAATTAA
GCTTCGATAGCCAAAGTCTGCTCAGCTTGTAAGATATTGAGGAGATTTCA
TATTTGTacgtagaaaaaattaaattatacaCAAAACAAccgataaaaat
aaattaatgcTAGAATTAAACAGAAAATGATCTCAAGGCTTCGAGAACAT
AATCTTGGTTTGAGAACTCTACCCCTAACTAGTCGACATGCAATACTTTA
TAGTACAATGTAACGATATGGCTCCATTGATTATGTCATTGTGTCAACGT
GAGTAGTCNCAGAGAGCTAAGCTATGAAGAAGCTTGGTGCCAGGTTATCA
AGAAGAACGTAGTTGATCTTCAGAAACATTTGATGGCAGAGAGACCTGGT
GAAAGAGAATTAGAACACATTAAAATCATCGTCGGTGAACTAACCGGTCG
AATCTCCATAATTATGAAAAGTAATATGTTGGAGTAGCAAATGGTATCAA
TTCTACTGTCGGCTGCCATTTATGTGAAAAGGTTAACAGTTTATTTCAAG
ATTCGCTTTAAGTTGAAAAGAAgatcaattcaattcaatgaAATTCCGAA
GGGTATACAGATCAGGTTGATAATTTGTATCTGTTCCCGAATTTAAGTCA
ATGATAAACTAAagtcgaaaatattttgatgttgaaAGGATGATTAGCGA
AAAGATGACGTAATGAAAACGATTTTTGGTTGGATAAAATGATTACGCAT
GCTCaagggcaaaaaaaaaacagaaaacaaaaaacaaaagatgtCTACCG
TGTTTTCCAGTTAATCTTTTTTATGTtgtaatattattatataatttaaa
ttctataaaaataatcatattgtgTAAATTCCTAAAAGTCAACagaaaaa
tttgcaataaaaagagacaaaacccTGTAAGACGTTTATAGAAATAAGGT
AAACACTAGCCTTTTCCTTGGATATTCTAAGATAGCAGTTTTGGTTGGCA
CTTTATAACTTTATAATTTCTTTGCTCTTCTAAAAACCTGAGGTTGTTTT
GCGTAAAGACTTCACTTTCATCTGTCCCTAAATTAAGCTTCGATAGCCAA
AGTCTGCTCAGCTTGTAAGATATTGAGGAGATTTCATATTTGTacgtaga
aaaaattaaattatacaCAAAACAAccgataaaaataaattaatgcTAGA
ATTAAACAGAAAATGATCTCAAGGCTTCGAGAACATAATCTTGGTTTGAG
AACTCTACCCCTAACTAGTCGACATGCAATACTTTATAGTACAATGTAAC
GATATGGCTCCATTGATTATGTCATTGTGTCAACGTGAGTAGTCAATTGA
GATCGAATTTTTTTACCTGAGTGACCTAAAGGATGTCATAATCACCTTAA
AGCTTTATTTTCTGCTTATTCAGCAAATTGTAAAAGCAAAGTGTTTCTTT
AAAAAGTAAAGCATATGCAACCTCTACAAAACCAGACTATTCAAAAATAT
TGATGTAATTATCGACTTTCGTTTTATTTCGTTGCGAGATGCATTCGGAT
ATCCAAACGATGTTTCGACATTCTTGTTCCTTCAGTTTGACGTAAGCGTA
AAAAACACCGAAGTGAAATTGTTGCATGAACGAGTTCACGTTCAGTTTGA
CCtga Coding sequence (CDS) from alignment at scaffold_288:692067..697571+ >TCONS_00057339 ID=TCONS_00057339|Name=TCONS_00057339|organism=Clytia hemisphaerica|type=CDS|length=2988bp|location=Sequence derived from alignment at scaffold_288:692067..697571+ (Clytia hemisphaerica)
ATGATGAATAGTCAAAATACACAACAAACTATCATTTCAGGTGCTAAGAC
TGAGACCATCTTGGAAGAAGAGGCTACTGGTGAAAATACACACGAGTCTG
TATCTTCTGAGGAGGAAGGGGGAAATTCTCCTCTAAACCGAAGCTTTAAT
ATGAATCGTCGATCGGAGATCTCGTCAGCTCAATCTACACCGAAAATTGA
GAAAGCTTTGATGAATAGATCCAGTGAGCTGATAAAGGAGTTCGCTCCGC
CTTCCATGGAGTATAGTTATTATGTTATTGCATCTCCAGTAGTTGGGCGC
CGTAAAGTTTCCGCCACAAATAGCGCCCCATCGTCTAATATGACAAGTAG
AAGTTATTCATTCGTATCCATGTCTTCGAGGGACTCGCAATCATCATCAG
AAGTTTCGGCTGTTGTTCAGCCACGTAAAAGAGCACCAAAATCACGAGGC
TTGTTACAGTCTGTTAAAGAAAAACTATTAGCTGAAATTGAGAATATCAA
TGTAGAACTCGTCAAAATGGATTCTGAAAAACTTGTTTTGGTGAATTTAC
GAAATGCTTCTTTGCTTTATCGAGATATGATATGTAAATCAGAACGTAAT
AATCAAGGGATACCGAATGCTGGTAAGTTACGAGCATCTTGCGAGAGTAT
CGAGTTGAAAATACAAGATGAGGAGCATGCATTGCAGGACGATTTAGCGA
TACCATCAATTGATGAAATTCGAAAGGACTTGAAAGAGATTTTAAAAGTC
TGTAGCGTTATTACAAACAATAAATCAACGAATATGAAAATGACTTTAGT
TGAGGAATTGTTATGTGCTGTTGGAAAGTTGTATGGGGTGGTGGATACTA
TTTTGGTGATTTTCTATGAAGATTTGAATGATGATGATTCAGATGATGGT
CTTGAGAATACTGGTGAAAGAGGGGATGAGGTTGACAATGTAGTGGAATG
CAAAGAAAGTGGTGGTGAAATTTCACCAGTTGCTTCGTCGCCAGAGCTGG
CAGTGGATgAAAGTGAAAACGTAGAGGAGAACCGAGCAAACGAAACCAAC
AACACAACAATAGAATCCATCATCGAAAATCGAACGAACGGAGCACGTGA
CTCATCATTCTGTTTAAAAGGCGACCAATCAGCTTCAAGCATTTCAATCG
ATTTAAGCGGGAAAATTGGAGAAGAATTAAAACATCTACAGAAAAAATTA
TCCAAAgcgaaaaaacttttcaaagggATAGAAAGACTTTCTTCAGGTAA
TCCTAAACCGAAATCACTTAGCTTGTGTTTTAAAGAAATCAACTCTACGA
TAACGGAGGAATTGATTAGAGAGCTAAGCTATGAAGAAGCTTGGTGCCAG
GTTATCAAGAAGAACGTAGTTGATCTTCAGAAACATTTGATGGCAGAGAG
ACCTGGTGAAAGAGAACTAGAACACATTAAAATCATCGTCGGTGAACTAA
CCGGTCGAATCTCCATAATTATGAAAAGTAATATGTTGGAGTAGATGATG
AATAGTCAAAATACACAACAAACTATCATTTCAGGTGCTAAGACTGAGAC
CATCTTGGAAGAAGAGGCTACTGGTGAAAATACACACGAGTCTGTATCTT
CTGAGGAGGAAGGGGGAAATTCTCCTCTAAACCGAAGCTTTAATATGAAT
CGTCGATCGGAGATCTCGTCAGCTCAATCTACACCGAAAATTGAGAAAGC
TTTGATGAATAGATCCAGTGAGCTGATAAAGGAGTTCGCTCCGCCTTCCA
TGGAGTATAGTTATTATGTTATTGCATCTCCAGTAGTTGGGCGCCGTAAA
GTTTCCGCCACAAATAGCGCCCCATCGTCTAATATGACAAGTAGAAGTTA
TTCATTCGTATCCATGTCTTCGAGGGACTCGCAATCATCATCAGAAGTTT
CGGCTGTTGTTCAGCCACGTAAAAGAGCACCAAAATCACGAGGCTTGTTA
CAGTCTGTTAAAGAAAAACTATTAGCTGAAATTGAGAATATCAATGTAGA
ACTCGTCAAAATGGATTCTGAAAAACTTGTTTTGGTGAATTTACGAAATG
CTTCTTTGCTTTATCGAGATATGATATGTAAATCAGAACGTAATAATCAA
GGGATACCGAATGCTGGTAAGTTACGAGCATCTTGCGAGAGTATCGAGTT
GAAAATACAAGATGAGGAGCATGCATTGCAGGACGATTTAGCGATACCAT
CAATTGATGAAATTCGAAAGGACTTGAAAGAGATTTTAAAAGTCTGTAGC
GTTATTACAAACAATAAATCAACGAATATGAAAATGACTTTAGTTGAGGA
ATTGTTATGTGCTGTTGGAAAGTTGTATGGGGTGGTGGATACTATTTTGG
TGATTTTCTATGAAGATTTGAATGATGATGATTCAGATGATGGTCTTGAG
AATACTGGTGAAAGAGGGGATGAGGTTGACAATGTAGTGGAATGCAAAGA
AAGTGGTGGTGAAATTTCACCAGTTGCTTCGTCGCCAGAGCTGGCAGTGG
ATgAAAGTGAAAACGTAGAGGAGAACCGAGCAAACGAAACCAACAACACA
ACAATAGAATCCATCATCGAAAATCGAACGAACGGAGCACGTGACTCATC
ATTCTGTTTAAAAGGCGACCAATCAGCTTCAAGCATTTCAATCGATTTAA
GCGGGAAAATTGGAGAAGAATTAAAACATCTACAGAAAAAATTATCCAAA
gcgaaaaaacttttcaaagggATAGAAAGACTTTCTTCAGGTAATCCTAA
ACCGAAATCACTTAGCTTGTGTTTTAAAGAAATCAACTCTACGATAACGG
AGGAATTGATTAGAGAGCTAAGCTATGAAGAAGCTTGGTGCCAGGTTATC
AAGAAGAACGTAGTTGATCTTCAGAAACATTTGATGGCAGAGAGACCTGG
TGAAAGAGAACTAGAACACATTAAAATCATCGTCGGTGAACTAACCGGTC
GAATCTCCATAATTATGAAAAGTAATATGTTGGAGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057339-exon-scaffold_288-1491911889:692067..693418 | TCONS_00057339-exon-scaffold_288-1491911889:692067..693418 | Clytia hemisphaerica | exon |
| TCONS_00057339-exon-scaffold_288-1510915933:692067..693418 | TCONS_00057339-exon-scaffold_288-1510915933:692067..693418 | Clytia hemisphaerica | exon |
| TCONS_00057339-exon-scaffold_288-1575043694:692067..693418 | TCONS_00057339-exon-scaffold_288-1575043694:692067..693418 | Clytia hemisphaerica | exon |
| TCONS_00057339-exon-scaffold_288-1491911889:694882..697571 | TCONS_00057339-exon-scaffold_288-1491911889:694882..697571 | Clytia hemisphaerica | exon |
| TCONS_00057339-exon-scaffold_288-1510915933:694882..697571 | TCONS_00057339-exon-scaffold_288-1510915933:694882..697571 | Clytia hemisphaerica | exon |
| TCONS_00057339-exon-scaffold_288-1575043694:694882..697571 | TCONS_00057339-exon-scaffold_288-1575043694:694882..697571 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_288 | supercontig | scaffold_288:692067..697571 + |
Blast
BLAST of TCONS_00057339 vs. Swiss-Prot (Human)
Match: VA0D1 (V-type proton ATPase subunit d 1 OS=Homo sapiens GN=ATP6V0D1 PE=1 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 4.551e-20 Identity = 40/54 (74.07%), Postives = 49/54 (90.74%), Query Frame = -2
Query: 3880 QVKLNVNSFMQQFHFGVFYAYVKLKEQECRNIVWISECISQRNKTKVDNYINIF 4041
+VKLN +F+ QFHFGVFYA+VKLKEQECRNIVWI+ECI+QR++ K+DNYI IF
Sbjct: 298 EVKLNKLAFLNQFHFGVFYAFVKLKEQECRNIVWIAECIAQRHRAKIDNYIPIF 351
The following BLAST results are available for this feature:
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