TCONS_00057311 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057311
Unique NameTCONS_00057311
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length117

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057311 ID=TCONS_00057311|Name=TCONS_00057311|organism=Clytia hemisphaerica|type=transcript|length=117bp
GAGATTTCCAAGTCCAAAGGGAGCTTGTTCGTTTTTTGAAAGATGTGTTT
GTGGAGAATAAGTTGAATTCTGCAATGAACTCTTGGAGATAATCACCATT
CTGGTTGCAGATGCTAT
Run BLAST on NCBI

transcript from alignment at scaffold_286:1035565..1035681

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057311 ID=TCONS_00057311|Name=TCONS_00057311|organism=Clytia hemisphaerica|type=transcript|length=117bp|location=Sequence derived from alignment at scaffold_286:1035565..1035681 (Clytia hemisphaerica)
ATAGCATCTGCAACCAGAATGGTGATTATCTCCAAGAGTTCATTGCAGAA
TTCAACTTATTCTCCACAAACACATCTTTCAAAAAACGAACAAGCTCCCT
TTGGACTTGGAAATCTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036116XLOC_036116Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057311-exon-scaffold_286-1491911889:1035565..1035681TCONS_00057311-exon-scaffold_286-1491911889:1035565..1035681Clytia hemisphaericaexon
TCONS_00057311-exon-scaffold_286-1510915933:1035565..1035681TCONS_00057311-exon-scaffold_286-1510915933:1035565..1035681Clytia hemisphaericaexon
TCONS_00057311-exon-scaffold_286-1575043694:1035565..1035681TCONS_00057311-exon-scaffold_286-1575043694:1035565..1035681Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:1035565..1035681 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057311 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top