TCONS_00057301 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057301
Unique NameTCONS_00057301
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length120

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057301 ID=TCONS_00057301|Name=TCONS_00057301|organism=Clytia hemisphaerica|type=transcript|length=120bp
CTTGTCGTTTAAAATTCACTTTCCTGTAACATCGTTCGTCTGTTGCAGCA
TTGCAGCAAGGAATTTATATAAATTGTTTGTCTGTTAAAGTCTCCCAACT
CAAACTACGCAAATATGAAC
Run BLAST on NCBI

transcript from alignment at scaffold_286:500675..500794

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057301 ID=TCONS_00057301|Name=TCONS_00057301|organism=Clytia hemisphaerica|type=transcript|length=120bp|location=Sequence derived from alignment at scaffold_286:500675..500794 (Clytia hemisphaerica)
GTTCATATTTGCGTAGTTTGAGTTGGGAGACTTTAACAGACAAACAATTT
ATATAAATTCCTTGCTGCAATGCTGCAACAGACGAACGATGTTACAGGAA
AGTGAATTTTAAACGACAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036106XLOC_036106Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057301-exon-scaffold_286-1491911889:500675..500794TCONS_00057301-exon-scaffold_286-1491911889:500675..500794Clytia hemisphaericaexon
TCONS_00057301-exon-scaffold_286-1510915933:500675..500794TCONS_00057301-exon-scaffold_286-1510915933:500675..500794Clytia hemisphaericaexon
TCONS_00057301-exon-scaffold_286-1575043694:500675..500794TCONS_00057301-exon-scaffold_286-1575043694:500675..500794Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:500675..500794 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057301 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top