TCONS_00057181 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057181
Unique NameTCONS_00057181
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1635

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057181 ID=TCONS_00057181|Name=TCONS_00057181|organism=Clytia hemisphaerica|type=transcript|length=1635bp
CTTTCAAAAACTCTACCTGGCAACCCAAGAAAGTCCATCTGTTGTAAAAT
CTCCTGTGAAGTCATCTAACAAGcaAATGTTGGATTTACTTTGTGAGATC
CaaacacattttttggaatattgTCAAAACACAAATCCTATGTATACCGT
TCTGTTACTACCAACATTGTTCCAAGCAATCCACTTGTCAATGACCGACT
CCATCAACACTCACCTCATGTTAAATTGCGTCGATACGATTCTTCAGAAA
TTGAAAACCAGTGAAACAGCTAGTAACCAGAATGTGTTGAGGATTGCATG
CACAGAATTATGTAGTGTCCTTGAAAAAGATGATACAGAAGCAGCTTCTT
TACAGCAAGTTGTCAACATTGTGTTGTTGCTACGTGACGTCATGAAAACA
TCCTTTCCCTTGGATACCATCAAAAACAGCGTGCGGAAGCGCTTACAAAG
AGCGGAGAATGATGTGAAGTCTAAAACAGCATTTGCAGATGCGAACACAC
CTCGACCAATGAGCAATAGAAAAGATAAAGGATCGTTAAGTGATGACCGA
TTATCATTTTCAACGGCTAGTTTCGATTCTGCGCGTTGCATGACGGAAGA
TTCCGAGACCTCTGAGAGTGAGGACGAAAAAGAGAAGGTTGGAAACGAAG
GTGATATGGATGAATTATCTTCAGATTGGGATTGGAGCAGCGGAGATGAA
GACGAAAGGGATGAATCTATTGTATTGGACATTCTTGGCAACTTGCAAGA
AATCCTGAATCGAACACAGCCCTCACCTTCTAATCCTCCTGAAATTGTTT
TAACCGAACATTGATGAGGTACTGTTGGTGGACATTTGATACTGGCAGTC
CATCAAGCTTCTCCACAGATTTAGTATAATTGTGAAAAGCCTGAAAAACT
AACCTCAGAAAATATTCTGCTTATCAATGCTTATGTCATGGACATTTTTC
CACCCATTGAAACTTGTTTCCATAACTCTGAAACATAAGTCTGGGTGACA
TTGCGGTGTTTGATGGTAGTAGTCCCGTTCTACTTTCAGGACAAGCACTC
GTGTATTTCAGTGTGGTCGCCATGTAGAAATAGCAGTGTTTTTTCTGGAC
AGCACTAAGCGTTCCTAATGGGAAAAGAAGGAATTCCTACTTCTTCACGA
GTAAGACTCTTTCCCCCGATAGGGAGGGCTCGTATAATCAAATTTCACTA
CTAACTACTGTGATCAGAATGGAAAAAGTTTTAGATTTGAGAAGTATATG
AATAGATTAAAAGGTTGAACAACAGTTTGTCCATTTTGAAGTTTATGTTT
TCAATACGTTAGTTTTTTGGTATATGTCTTCAACTGGATTTTAAAACGAG
GTAAAAAAATGTGAGGTCAAATCTAAGCTACTGTTCATGAAAAGGTTTAA
ATATAACTATAAAGTTTGTGAATCTAGAGATCATATAGACATTAAGTCTG
TTtgtatatcattgtttttaaattgataGGGTGGTTTACACACGCCAATT
TTGTCGGCCAAATTATGAAACTTTCCAACAGGTTTTCATCTaaacatgaa
ggtaataaagatagatggagagtcaatgccttttgttctattctgattta
tcatcggaagcaaacagctgtttggttgctttggg
Run BLAST on NCBI

protein sequence of TCONS_00057181-protein

>TCONS_00057181-protein ID=TCONS_00057181-protein|Name=TCONS_00057181-protein|organism=Clytia hemisphaerica|type=polypeptide|length=270bp
FQKLYLATQESPSVVKSPVKSSNKQMLDLLCEIQTHFLEYCQNTNPMYTV
LLLPTLFQAIHLSMTDSINTHLMLNCVDTILQKLKTSETASNQNVLRIAC
TELCSVLEKDDTEAASLQQVVNIVLLLRDVMKTSFPLDTIKNSVRKRLQR
AENDVKSKTAFADANTPRPMSNRKDKGSLSDDRLSFSTASFDSARCMTED
SETSESEDEKEKVGNEGDMDELSSDWDWSSGDEDERDESIVLDILGNLQE
ILNRTQPSPSNPPEIVLTEH
Run BLAST on NCBI

transcript from alignment at scaffold_286:277360..285624+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057181 ID=TCONS_00057181|Name=TCONS_00057181|organism=Clytia hemisphaerica|type=transcript|length=8265bp|location=Sequence derived from alignment at scaffold_286:277360..285624+ (Clytia hemisphaerica)
CTTTCAAAAACTCTACCTGGCAACCCAAGAAAGGTAATTTCAATGTGATA
CATTATGCTTTTTACTAACATTTTCATGTGTTCTTAGCTTCATATCACCT
CTACTATCATGCGAATTCATGATCACTAACTCACTCACTgagtacttttt
atttttaatgtacATTGCATTTAATCTTTTAGTCCATCTGTTGTAAAATC
TCCTGTGAAGTCATCTAACAAGGTAATAAAACAGCCCTAGTGGAACTCTT
TTTATACAGTGATGATAAATACTTCTATCGATATTCCaacggggatagaa
attctattgctctaagcttaaaatatccagtggggatggttttgcagtgc
aaatttttacattgaatttctgatgaaaatgaaactctttcactgaagat
tgccatcctggatggcatggaactttgagtatgaaattaacttaaatcgt
tttctttactcaaactaatgaaaatgaaagtcaatttcccagtgggatTG
AAATTGTAAGGTATTTTCCACAGCGTGGACGAGATTTTGGCCAACTTTTC
AGTTGGGCTGGCGCCCCAGCAGGTCTGTAGCACAGGGGTGAAATAAAACA
TCACCGCTCCCGATACCCGCGGTAATACAGTATATCGTCTTTAAaccctt
gtttgtttgtttgtaattgTTATTTATCATGTATTATTGTCATCATCTTA
ATTAAATCTCGTccttattttcttttaattttcagcaAATGTTGGATTTA
CTTTGTGAGATCCaaacacattttttggaatattgTCAAAACACAAATCC
TATGTATACCGTAAGTCGTACTATTCTAttgacgctctttaattcgattt
tcaagggggggGGTTGGATTTCCATCGAATTAAGGaatgtatcgaatagt
agagcatTGTTCTTTTTAGAGTTTCTTTTTGATGGTGactcaatattatc
gaataagggagcgtatagGATAGTAGGgagtcgtttatgagagtttctta
ttGACTGTggttttcaatattatcgaataatggagcgtgtCGGACAGTAG
TGCGTTGTCTATGATAGTtccttgttgacggtgactttcaatattatcga
ataagaGAGTATAAACTGTAAATACTTAATGGAATATTGCGTCTAAGCAG
CGCAGTCATTAGTGTATTTTCAAAACACGCGTTGAAACCCTTGTATACAG
AGGGCCATAAGAGAGGCTCGATACAAACATGTATGACTGTGGCTGATATT
TtccttttatcttttatttcttGCAACTAAACAGTCATTAACGCGTTTTA
GGTTCTATCCCTGGTCAGTACCAACTGGAGAAATCACAATCACATTCCCA
TGAGAATGTTTGACACTATTACAGAGATTTTTTGTAAGGCAGACCTTACA
AAAAGAGAGACCCTACTATTGCAAGCTCCCTTAAAGAGGGAAGCTTTTCG
TTGGAAAACTTTTATCACCTATTTGACCCTTAAAATGGAATTGGAAATTG
AATTGTCGGGAAAAACTTCATCACTAGCCAAAAACTTTCGTTAATTCACC
CTGATTAAGTTTTCccattactcttaggtgccaaataaacgggggggggg
ttcgaataaacgggagggttggaaaaaattttcaaatcaaataaacgggg
ggggggctaattaccgggggggtgGAAAATGGACNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNggggggggcgtttatttggcacctaagagtaaatgTGCAAC
AACATAGTAGATTTCGTACAGTTTTAAGAAAAGAACATTTGTACAAATGC
TCTACTCTACTCTGTCTTCTTTGGCAGGTTCTGTTACTACCAACATTGTT
CCAAGCAATCCACTTGTCAATGACCGACTCCATCAACACTCACCTCATGT
TAAATTGGCAAGTAACTAACCTTTCTTATATCTTATCGGGGGGAAATGTC
GGggaaagtgaagaaatttttccccgaccaaaacttttaccttatttttt
ttccccaaccaaaattcaaatccaaTTTTTTTACGCTTCTGTTAACCGAC
ATTAGTGCTTTAAACatcaaattacaaaatctaTTTTCGAGCTACAATCA
GTgcaataatatattggcaccaGCCTAAAAAAAACACTGGATTTACTCAC
TTCCCTCTCCTAAATCCCATCCCCCTAATTTCAATGGTTGAAGAAGGCAA
CAGGGCTGCAGACTCAACCATTGAAGCTTGGGGGGAGGGAAAATAAGTTT
TAACATTAAAAATCAGTGTTTACTGCCAAATATTATTGCAGTGATTGTAG
ttaaggaaaccatttcatttggacaatttagtcggtTGGAAGTagttaaa
ttgtaaatttggtcggggaaaagtgacgaatttgagaTTTTGGTCGGgtg
acaaaatttttccccgacattttttccccaatAAGATAGTCCTTTCTTAA
CGCTCCCGTGACGTTTTAATCAAATTAgctttttgctttaaaattctATC
TAGCTCGGACGAATAAATCAAGTAAACAAAGCGGCTGGGTGTCGTTTTGC
AACTCTGCtctttcaaacaaaatcttctttCAAAGCTGACGTGTTCCTTC
AAAAAAAGTTGGGAATTTTCCtacctttttttctcaaaaactacAATTTT
CGTTGTAAAAAAGACGCCCGTTTTATGCCGATAAAATAGGCCTCTTTGGT
GGCAGTTGCATCCATTGTTTGCAAAGTCCTGAAGGGGTTTGAAACTCTTG
TATGAGAAATAAAGTAAATTTCGTCTTATCTTAAGCTTAAGAATTCCCTT
CTAGCTCTTccgttttcattttaaaattacCAGAATGTAAACTGAAATtt
caaaaccttcaaaataAGTCCAACATTATTTGCCCAGAAACTCTATGTCT
TAATTCCTGCTGACACCCACTAacagattcgtgctccttacACTTTGTGG
AGGTCTTCGATTCTGACTAAATTTAATTCATATCTGAACCGTATATAATA
TGAATATACTCAGTGtaacttttcttttgttcttttttgatTTCAGCGTC
GATACGATTCTTCAGAAATTGAAAACCAGTGAAACAGCGTAAGTCTGATG
TACATTCACCCATTCTTATATTCTTGCATATATCATTTTCCCATAGCTTC
CAGCCGCATATTTGTTTGACGATTTCTTACCAAACAGGTCGACTATTAAA
AAACATTCAGAGTCTATCTACAATCTATCAAAAATATTATGGCAAGAATT
CCCTTCCCTCTAGTATCAATATTGATGGGTGGAAAGGCTGTCATAATGCT
CAGAAAAAGCTCACATCAACACTGATATATTTGGGGGGGAtagggatttt
tcaagaaattgccacatattttgtcactgattgtagttaTGCCTTAACCT
TTATGGCCACTCTTTGGCTGTAAACCCTGTACTAATTGAAAGCCCTCCTT
TTTGCCTTGGATACCACCAGTAGTAGAAACCTAAGAGTAACGCGACCAAT
GGATGCACCATTTGATAGCACCCATAGAGACGGTTCAATCGGACATAGAC
TTCTCCAATTGTAGATAACGTTTTCCCTTGAGGCTaacaaaaattgtatt
ttaattttccttttttgtacAATTTTCCTTTCTTCTTTTACTTTCAGTAG
TAACCAGAATGTGTTGAGGATTGCATGCACAGAATTATGTAGTGTCCTTG
AAAAAGATGTAAGAAATTATTTCCCAATCCATACTCCATGAGGCGTGAGC
TGCTCTCATGTACCATTGATCTTTGTTAATCCTGGAGACAGTTTCTCAAG
TTCGACAACTAAAatatttgatcggagtttttgtaaaatttggtatccTG
ATGATAGCAATGCTCAATGTCGGTACTACCtttttattgccgacccaagA
AAATATCagtgttttgattggtcaatattttactcgttccgataTTTTAC
CGATAATACGGAAAAATCTTGGAACTCGTAatatatttctcgtattgcac
tcggaGTCATTAGTAATTATTACTTATAGCGACATGGTATTTAAATATTG
GACCTCCGTCGAGCGGGGACCACTTTctaaaaactctgatcaaagatagA
GGGGTTTATTAAATATTGGTCAATAGAATTTGTTCATCAACGACGTTTTa
ctaattttgacgaaaatgcATATTTTCAGCGAATTCTTTAAATTCTAAGG
TTTTTCCGTGTTTGGGGGAATTCAGTATTGTGTGTGAAAATAACAACAGC
CATAAAatattaaattccgcgaaaactACTTATCCCTTCTTGCAACTCAA
CTTTAGGATACAGAAGCAGCTTCTTTACAGCAAGTTGTCAACATTGTGTT
GTTGCTACGTGACGTCATGAAAACATCCTTTCCCTTGGATACCATCAAAA
ACAGCGTGCGGAAGCGCTTACAAAGAGCGGAGAATGATGTGAAGTCTAAA
ACAGCATTTGCAGATGCGAACACACCTCGACCAATGAGCAATAGAAAAGA
TAAAGGTATGTTTgtatgtttgtttgtttgtttgtttgtttgtttgtttg
tttgtttgtttgttgtcaATCATCATTCGTCACGTGCGAGAGTCATATGa
cgtaccttatcggggaaaacttcgtcggggaaaatttttgtcggggaaaa
atattcgtcacttgctggttttggtaaacgcattaaggccggggaaaatt
ttcgtcggggaaaaatattcgtcacttgctggttttggtaaacgcattaa
ggccggggaaaattttcgtcggggaaaaatattcgtcacttggccgaaat
ctcgtcacttttccccgacgaagtttcccccgataaggtacttttCAACC
AAACAAACAAAACTCGATGAAGGTTTTTGTGTAAAAACAgattactttaa
tcggattaactttcgcgatattaaatttcgtgatttcgcgaatttttacc
attttcgcgaaattaaaactcgcgaaaacgcGTGACATTTCCGACTCGCG
GAATGAAATCCaccacaaaaattttaaaatcgcaTTTTCGGCGGAGAAAC
CAAtccaaagttttcaaaactctgactttAAATTagaattaaatgaaatt
aaatccagaaaactTCCCGATTGTTTACGCTCGCAAAATTttatccgatt
aaagtattggtaaaattagtactagtaatctcatggttataagggaaatt
cgggataaatttcccgagtgcaacgagggaaatttaaaacatttcgaaat
ttgaccgagggtaatttatccagaatttcacgaaaacaagcatgggattc
ctggttaatctcggtttggattgaaattttaacaattctgaaagacgtct
atttaacactggaaatcaatctgaaaatttaaaaagaagtcTCAAGAAAG
TCTTAGAAAtgcgaatcgagttttaattggatagtattctatttacttaa
gcctttgaagttagtaagaaagtcgaaaaaggtgatgaatttccaaacga
tgaaaatttcacttctgcgggaaattacaaaatctaggaggggaattaca
aaagctaggagttgaatttcaatcaaccatgagattactattCTGTATTC
ACCAGCTCCTGGCTACTTCATACCGTGGTGGTGAAGAATGCACTTACTGT
TTTATTCGGAGAAAAAAAGAGagtgaaaaaaacaaataagCTCGGCTACT
GAAAATTTAGAGCAGTCTGTagttgtttaaaaaaaagactcagaaaattt
cttttgggtctgaaaattattttttcaccaaGACGGCAATCGGGTCTCGA
ATTAGTTGGGGAAATGTAATTTAATCAGAATAAATTTTCTACCAAAACTG
ATAAATCTACTAAGTTGCCTTTGtgtcagagttttgaaatagCCATACTC
TCCGATTTTTTGTGTCGATATCTGCTCTTTTGGATGAAGCAAAAAATAAA
GACATTTAAACAACTTGAgggttcaaataaaaaacattttttccatcTTT
TTGTCAGGATCGTTAAGTGATGACCGATTATCATTTTCAACGGCTAGTTT
CGATTCTGCGCGTTGCATGACGGAAGATTCCGAGACCTCTGAGAGTGAGG
ACGAAAAAGAGAAGGTTGGAAACGAAGGTGATATGGATGAATTATCTTCA
GATTGGGATTGGAGCAGCGGAGATGAAGACGAAAGGGTAAGACCTAATTA
GTACCCAAACCTCAAATTTCTATTGCTTCGCTATCTTAAGTTTTATTATT
CTACAGCAGTAATCAATCGCCAATATATTGGTGCTCAATGACAGCAAGGA
ACTTTAATAAAACATTTGAAAGTTTGTTGATGAAAGTGATCAAGATTCGT
AggaaaatcaataaataaacTTTTGGCTATGTAATTTAataataattcaa
ttttttggacctacctccggtggggtggaggtcctataaattcagctctg
tccgtccgtccgttcgttaccagcttttctcgagattgaatcataggaat
catttgatttttggtacaaaggtgcaaaatggtggtggccgaaatgtgac
ggagcccgattttcgaaaaaaaaaatttttgggcaaatttgggcaaaaaa
aaaggctaaaaaaagggttttttggactttgtgaaatattggatcgttgt
ttttttctaattctttgcatgaaagtaggtaaaagatggctcaagtagat
ttttgtaaaataacttttcagctcaaaaaacgcatcttcatctataagaa
tcactattaataagcatacatcaatgttcttagccaaattactcaatttt
ttgatgagatagatgtctttttatgctcacgaagtcttgaaaatgaaaga
atatttcaagagcatgaaattttggtttctaaacgttttttttttataag
aaacgactaattttaataaatcgtcactatttgtgttctgaatgattgtt
taacgttcatgctcacgtagatatcaattatatatgtgttaaatgcataa
ccaggtaggtccataaaagtatcacttgttattttCTAGGATGAATCTAT
TGTATTGGACATTCTTGGCAACTTGCAAGAAATCCTGAATCGAACACAGC
CCTCACCTTCTAATCCTCCTGAAATTGTTTTAACCGAACATTGATGAGGT
ACTGTTGGTGGACATTTGATACTGGCAGTCCATCAAGCTTCTCCACAGAT
TTAGTATAATTGTGAAAAGCCTGAAAAACTAACCTCAGAAAATATTCTGC
TTATCAATGCTTATGTCATGGACATTTTTCCACCCATTGAAACTTGTTTC
CATAACTCTGAAACATAAGTCTGGGTGACATTGCGGTGTTTGATGGTAGT
AGTCCCGTTCTACTTTCAGGACAAGCACTCGTGTATTTCAGTGTGGTCGC
CATGTAGAAATAGCAGTGTTTTTTCTGGACAGCACTAAGCGTTCCTAATG
GGAAAAGAAGGAATTCCTACTTCTTCACGAGTAAGACTCTTTCCCCCGAT
AGGGAGGGCTCGTATAATCAAATTTCACTACTAACTACTGTGATCAGAAT
GGAAAAAGTTTTAGATTTGAGAAGTATATGAATAGATTAAAAGGTTGAAC
AACAGTTTGTCCATTTTGAAGTTTATGTTTTCAATACGTTAGTTTTTTGG
TATATGTCTTCAACTGGATTTTAAAACGAGGTAAAAAAATGTGAGGTCAA
ATCTAAGCTACTGTTCATGAAAAGGTTTAAATATAACTATAAAGTTTGTG
AATCTAGAGATCATATAGACATTAAGTCTGTTtgtatatcattgttttta
aattgataGGGTGGTTTACACACGCCAATTTTGTCGGCCAAATTATGAAA
CTTTCCAACAGGTTTTCATCTaaacatgaaggtaataaagatagatggag
agtcaatgccttttgttctattctgatttatcatcggaagcaaacagctg
tttggttgctttggg

Coding sequence (CDS) from alignment at scaffold_286:277360..285624+

>TCONS_00057181 ID=TCONS_00057181|Name=TCONS_00057181|organism=Clytia hemisphaerica|type=CDS|length=7317bp|location=Sequence derived from alignment at scaffold_286:277360..285624+ (Clytia hemisphaerica)
TTTCAAAAACTCTACCTGGCAACCCAAGAAAGTCCATCTGTTGTAAAATC
TCCTGTGAAGTCATCTAACAAGcaAATGTTGGATTTACTTTGTGAGATCC
aaacacattttttggaatattgTCAAAACACAAATCCTATGTATACCGTT
CTGTTACTACCAACATTGTTCCAAGCAATCCACTTGTCAATGACCGACTC
CATCAACACTCACCTCATGTTAAATTGCGTCGATACGATTCTTCAGAAAT
TGAAAACCAGTGAAACAGCTAGTAACCAGAATGTGTTGAGGATTGCATGC
ACAGAATTATGTAGTGTCCTTGAAAAAGATGATACAGAAGCAGCTTCTTT
ACAGCAAGTTGTCAACATTGTGTTGTTGCTACGTGACGTCATGAAAACAT
CCTTTCCCTTGGATACCATCAAAAACAGCGTGCGGAAGCGCTTACAAAGA
GCGGAGAATGATGTGAAGTCTAAAACAGCATTTGCAGATGCGAACACACC
TCGACCAATGAGCAATAGAAAAGATAAAGGATCGTTAAGTGATGACCGAT
TATCATTTTCAACGGCTAGTTTCGATTCTGCGCGTTGCATGACGGAAGAT
TCCGAGACCTCTGAGAGTGAGGACGAAAAAGAGAAGGTTGGAAACGAAGG
TGATATGGATGAATTATCTTCAGATTGGGATTGGAGCAGCGGAGATGAAG
ACGAAAGGGATGAATCTATTGTATTGGACATTCTTGGCAACTTGCAAGAA
ATCCTGAATCGAACACAGCCCTCACCTTCTAATCCTCCTGAAATTGTTTT
AACCGAACATTGATTTCAAAAACTCTACCTGGCAACCCAAGAAAGTCCAT
CTGTTGTAAAATCTCCTGTGAAGTCATCTAACAAGcaAATGTTGGATTTA
CTTTGTGAGATCCaaacacattttttggaatattgTCAAAACACAAATCC
TATGTATACCGTTCTGTTACTACCAACATTGTTCCAAGCAATCCACTTGT
CAATGACCGACTCCATCAACACTCACCTCATGTTAAATTGCGTCGATACG
ATTCTTCAGAAATTGAAAACCAGTGAAACAGCTAGTAACCAGAATGTGTT
GAGGATTGCATGCACAGAATTATGTAGTGTCCTTGAAAAAGATGATACAG
AAGCAGCTTCTTTACAGCAAGTTGTCAACATTGTGTTGTTGCTACGTGAC
GTCATGAAAACATCCTTTCCCTTGGATACCATCAAAAACAGCGTGCGGAA
GCGCTTACAAAGAGCGGAGAATGATGTGAAGTCTAAAACAGCATTTGCAG
ATGCGAACACACCTCGACCAATGAGCAATAGAAAAGATAAAGGATCGTTA
AGTGATGACCGATTATCATTTTCAACGGCTAGTTTCGATTCTGCGCGTTG
CATGACGGAAGATTCCGAGACCTCTGAGAGTGAGGACGAAAAAGAGAAGG
TTGGAAACGAAGGTGATATGGATGAATTATCTTCAGATTGGGATTGGAGC
AGCGGAGATGAAGACGAAAGGGATGAATCTATTGTATTGGACATTCTTGG
CAACTTGCAAGAAATCCTGAATCGAACACAGCCCTCACCTTCTAATCCTC
CTGAAATTGTTTTAACCGAACATTGATTTCAAAAACTCTACCTGGCAACC
CAAGAAAGTCCATCTGTTGTAAAATCTCCTGTGAAGTCATCTAACAAGca
AATGTTGGATTTACTTTGTGAGATCCaaacacattttttggaatattgTC
AAAACACAAATCCTATGTATACCGTTCTGTTACTACCAACATTGTTCCAA
GCAATCCACTTGTCAATGACCGACTCCATCAACACTCACCTCATGTTAAA
TTGCGTCGATACGATTCTTCAGAAATTGAAAACCAGTGAAACAGCTAGTA
ACCAGAATGTGTTGAGGATTGCATGCACAGAATTATGTAGTGTCCTTGAA
AAAGATGATACAGAAGCAGCTTCTTTACAGCAAGTTGTCAACATTGTGTT
GTTGCTACGTGACGTCATGAAAACATCCTTTCCCTTGGATACCATCAAAA
ACAGCGTGCGGAAGCGCTTACAAAGAGCGGAGAATGATGTGAAGTCTAAA
ACAGCATTTGCAGATGCGAACACACCTCGACCAATGAGCAATAGAAAAGA
TAAAGGATCGTTAAGTGATGACCGATTATCATTTTCAACGGCTAGTTTCG
ATTCTGCGCGTTGCATGACGGAAGATTCCGAGACCTCTGAGAGTGAGGAC
GAAAAAGAGAAGGTTGGAAACGAAGGTGATATGGATGAATTATCTTCAGA
TTGGGATTGGAGCAGCGGAGATGAAGACGAAAGGGATGAATCTATTGTAT
TGGACATTCTTGGCAACTTGCAAGAAATCCTGAATCGAACACAGCCCTCA
CCTTCTAATCCTCCTGAAATTGTTTTAACCGAACATTGATTTCAAAAACT
CTACCTGGCAACCCAAGAAAGTCCATCTGTTGTAAAATCTCCTGTGAAGT
CATCTAACAAGcaAATGTTGGATTTACTTTGTGAGATCCaaacacatttt
ttggaatattgTCAAAACACAAATCCTATGTATACCGTTCTGTTACTACC
AACATTGTTCCAAGCAATCCACTTGTCAATGACCGACTCCATCAACACTC
ACCTCATGTTAAATTGCGTCGATACGATTCTTCAGAAATTGAAAACCAGT
GAAACAGCTAGTAACCAGAATGTGTTGAGGATTGCATGCACAGAATTATG
TAGTGTCCTTGAAAAAGATGATACAGAAGCAGCTTCTTTACAGCAAGTTG
TCAACATTGTGTTGTTGCTACGTGACGTCATGAAAACATCCTTTCCCTTG
GATACCATCAAAAACAGCGTGCGGAAGCGCTTACAAAGAGCGGAGAATGA
TGTGAAGTCTAAAACAGCATTTGCAGATGCGAACACACCTCGACCAATGA
GCAATAGAAAAGATAAAGGATCGTTAAGTGATGACCGATTATCATTTTCA
ACGGCTAGTTTCGATTCTGCGCGTTGCATGACGGAAGATTCCGAGACCTC
TGAGAGTGAGGACGAAAAAGAGAAGGTTGGAAACGAAGGTGATATGGATG
AATTATCTTCAGATTGGGATTGGAGCAGCGGAGATGAAGACGAAAGGGAT
GAATCTATTGTATTGGACATTCTTGGCAACTTGCAAGAAATCCTGAATCG
AACACAGCCCTCACCTTCTAATCCTCCTGAAATTGTTTTAACCGAACATT
GATTTCAAAAACTCTACCTGGCAACCCAAGAAAGTCCATCTGTTGTAAAA
TCTCCTGTGAAGTCATCTAACAAGcaAATGTTGGATTTACTTTGTGAGAT
CCaaacacattttttggaatattgTCAAAACACAAATCCTATGTATACCG
TTCTGTTACTACCAACATTGTTCCAAGCAATCCACTTGTCAATGACCGAC
TCCATCAACACTCACCTCATGTTAAATTGCGTCGATACGATTCTTCAGAA
ATTGAAAACCAGTGAAACAGCTAGTAACCAGAATGTGTTGAGGATTGCAT
GCACAGAATTATGTAGTGTCCTTGAAAAAGATGATACAGAAGCAGCTTCT
TTACAGCAAGTTGTCAACATTGTGTTGTTGCTACGTGACGTCATGAAAAC
ATCCTTTCCCTTGGATACCATCAAAAACAGCGTGCGGAAGCGCTTACAAA
GAGCGGAGAATGATGTGAAGTCTAAAACAGCATTTGCAGATGCGAACACA
CCTCGACCAATGAGCAATAGAAAAGATAAAGGATCGTTAAGTGATGACCG
ATTATCATTTTCAACGGCTAGTTTCGATTCTGCGCGTTGCATGACGGAAG
ATTCCGAGACCTCTGAGAGTGAGGACGAAAAAGAGAAGGTTGGAAACGAA
GGTGATATGGATGAATTATCTTCAGATTGGGATTGGAGCAGCGGAGATGA
AGACGAAAGGGATGAATCTATTGTATTGGACATTCTTGGCAACTTGCAAG
AAATCCTGAATCGAACACAGCCCTCACCTTCTAATCCTCCTGAAATTGTT
TTAACCGAACATTGATTTCAAAAACTCTACCTGGCAACCCAAGAAAGTCC
ATCTGTTGTAAAATCTCCTGTGAAGTCATCTAACAAGcaAATGTTGGATT
TACTTTGTGAGATCCaaacacattttttggaatattgTCAAAACACAAAT
CCTATGTATACCGTTCTGTTACTACCAACATTGTTCCAAGCAATCCACTT
GTCAATGACCGACTCCATCAACACTCACCTCATGTTAAATTGCGTCGATA
CGATTCTTCAGAAATTGAAAACCAGTGAAACAGCTAGTAACCAGAATGTG
TTGAGGATTGCATGCACAGAATTATGTAGTGTCCTTGAAAAAGATGATAC
AGAAGCAGCTTCTTTACAGCAAGTTGTCAACATTGTGTTGTTGCTACGTG
ACGTCATGAAAACATCCTTTCCCTTGGATACCATCAAAAACAGCGTGCGG
AAGCGCTTACAAAGAGCGGAGAATGATGTGAAGTCTAAAACAGCATTTGC
AGATGCGAACACACCTCGACCAATGAGCAATAGAAAAGATAAAGGATCGT
TAAGTGATGACCGATTATCATTTTCAACGGCTAGTTTCGATTCTGCGCGT
TGCATGACGGAAGATTCCGAGACCTCTGAGAGTGAGGACGAAAAAGAGAA
GGTTGGAAACGAAGGTGATATGGATGAATTATCTTCAGATTGGGATTGGA
GCAGCGGAGATGAAGACGAAAGGGATGAATCTATTGTATTGGACATTCTT
GGCAACTTGCAAGAAATCCTGAATCGAACACAGCCCTCACCTTCTAATCC
TCCTGAAATTGTTTTAACCGAACATTGATTTCAAAAACTCTACCTGGCAA
CCCAAGAAAGTCCATCTGTTGTAAAATCTCCTGTGAAGTCATCTAACAAG
caAATGTTGGATTTACTTTGTGAGATCCaaacacattttttggaatattg
TCAAAACACAAATCCTATGTATACCGTTCTGTTACTACCAACATTGTTCC
AAGCAATCCACTTGTCAATGACCGACTCCATCAACACTCACCTCATGTTA
AATTGCGTCGATACGATTCTTCAGAAATTGAAAACCAGTGAAACAGCTAG
TAACCAGAATGTGTTGAGGATTGCATGCACAGAATTATGTAGTGTCCTTG
AAAAAGATGATACAGAAGCAGCTTCTTTACAGCAAGTTGTCAACATTGTG
TTGTTGCTACGTGACGTCATGAAAACATCCTTTCCCTTGGATACCATCAA
AAACAGCGTGCGGAAGCGCTTACAAAGAGCGGAGAATGATGTGAAGTCTA
AAACAGCATTTGCAGATGCGAACACACCTCGACCAATGAGCAATAGAAAA
GATAAAGGATCGTTAAGTGATGACCGATTATCATTTTCAACGGCTAGTTT
CGATTCTGCGCGTTGCATGACGGAAGATTCCGAGACCTCTGAGAGTGAGG
ACGAAAAAGAGAAGGTTGGAAACGAAGGTGATATGGATGAATTATCTTCA
GATTGGGATTGGAGCAGCGGAGATGAAGACGAAAGGGATGAATCTATTGT
ATTGGACATTCTTGGCAACTTGCAAGAAATCCTGAATCGAACACAGCCCT
CACCTTCTAATCCTCCTGAAATTGTTTTAACCGAACATTGATTTCAAAAA
CTCTACCTGGCAACCCAAGAAAGTCCATCTGTTGTAAAATCTCCTGTGAA
GTCATCTAACAAGcaAATGTTGGATTTACTTTGTGAGATCCaaacacatt
ttttggaatattgTCAAAACACAAATCCTATGTATACCGTTCTGTTACTA
CCAACATTGTTCCAAGCAATCCACTTGTCAATGACCGACTCCATCAACAC
TCACCTCATGTTAAATTGCGTCGATACGATTCTTCAGAAATTGAAAACCA
GTGAAACAGCTAGTAACCAGAATGTGTTGAGGATTGCATGCACAGAATTA
TGTAGTGTCCTTGAAAAAGATGATACAGAAGCAGCTTCTTTACAGCAAGT
TGTCAACATTGTGTTGTTGCTACGTGACGTCATGAAAACATCCTTTCCCT
TGGATACCATCAAAAACAGCGTGCGGAAGCGCTTACAAAGAGCGGAGAAT
GATGTGAAGTCTAAAACAGCATTTGCAGATGCGAACACACCTCGACCAAT
GAGCAATAGAAAAGATAAAGGATCGTTAAGTGATGACCGATTATCATTTT
CAACGGCTAGTTTCGATTCTGCGCGTTGCATGACGGAAGATTCCGAGACC
TCTGAGAGTGAGGACGAAAAAGAGAAGGTTGGAAACGAAGGTGATATGGA
TGAATTATCTTCAGATTGGGATTGGAGCAGCGGAGATGAAGACGAAAGGG
ATGAATCTATTGTATTGGACATTCTTGGCAACTTGCAAGAAATCCTGAAT
CGAACACAGCCCTCACCTTCTAATCCTCCTGAAATTGTTTTAACCGAACA
TTGATTTCAAAAACTCTACCTGGCAACCCAAGAAAGTCCATCTGTTGTAA
AATCTCCTGTGAAGTCATCTAACAAGcaAATGTTGGATTTACTTTGTGAG
ATCCaaacacattttttggaatattgTCAAAACACAAATCCTATGTATAC
CGTTCTGTTACTACCAACATTGTTCCAAGCAATCCACTTGTCAATGACCG
ACTCCATCAACACTCACCTCATGTTAAATTGCGTCGATACGATTCTTCAG
AAATTGAAAACCAGTGAAACAGCTAGTAACCAGAATGTGTTGAGGATTGC
ATGCACAGAATTATGTAGTGTCCTTGAAAAAGATGATACAGAAGCAGCTT
CTTTACAGCAAGTTGTCAACATTGTGTTGTTGCTACGTGACGTCATGAAA
ACATCCTTTCCCTTGGATACCATCAAAAACAGCGTGCGGAAGCGCTTACA
AAGAGCGGAGAATGATGTGAAGTCTAAAACAGCATTTGCAGATGCGAACA
CACCTCGACCAATGAGCAATAGAAAAGATAAAGGATCGTTAAGTGATGAC
CGATTATCATTTTCAACGGCTAGTTTCGATTCTGCGCGTTGCATGACGGA
AGATTCCGAGACCTCTGAGAGTGAGGACGAAAAAGAGAAGGTTGGAAACG
AAGGTGATATGGATGAATTATCTTCAGATTGGGATTGGAGCAGCGGAGAT
GAAGACGAAAGGGATGAATCTATTGTATTGGACATTCTTGGCAACTTGCA
AGAAATCCTGAATCGAACACAGCCCTCACCTTCTAATCCTCCTGAAATTG
TTTTAACCGAACATTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_036032XLOC_036032Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057181-exon-scaffold_286-1491911889:277360..277392TCONS_00057181-exon-scaffold_286-1491911889:277360..277392Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:277360..277392TCONS_00057181-exon-scaffold_286-1510915933:277360..277392Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:277360..277392TCONS_00057181-exon-scaffold_286-1575043694:277360..277392Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:277542..277581TCONS_00057181-exon-scaffold_286-1491911889:277542..277581Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:277542..277581TCONS_00057181-exon-scaffold_286-1510915933:277542..277581Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:277542..277581TCONS_00057181-exon-scaffold_286-1575043694:277542..277581Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:278095..278169TCONS_00057181-exon-scaffold_286-1491911889:278095..278169Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:278095..278169TCONS_00057181-exon-scaffold_286-1510915933:278095..278169Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:278095..278169TCONS_00057181-exon-scaffold_286-1575043694:278095..278169Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:279487..279566TCONS_00057181-exon-scaffold_286-1491911889:279487..279566Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:279487..279566TCONS_00057181-exon-scaffold_286-1510915933:279487..279566Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:279487..279566TCONS_00057181-exon-scaffold_286-1575043694:279487..279566Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:280706..280747TCONS_00057181-exon-scaffold_286-1491911889:280706..280747Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:280706..280747TCONS_00057181-exon-scaffold_286-1510915933:280706..280747Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:280706..280747TCONS_00057181-exon-scaffold_286-1575043694:280706..280747Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:281307..281367TCONS_00057181-exon-scaffold_286-1491911889:281307..281367Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:281307..281367TCONS_00057181-exon-scaffold_286-1510915933:281307..281367Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:281307..281367TCONS_00057181-exon-scaffold_286-1575043694:281307..281367Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:281966..282164TCONS_00057181-exon-scaffold_286-1491911889:281966..282164Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:281966..282164TCONS_00057181-exon-scaffold_286-1510915933:281966..282164Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:281966..282164TCONS_00057181-exon-scaffold_286-1575043694:281966..282164Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:283667..283845TCONS_00057181-exon-scaffold_286-1491911889:283667..283845Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:283667..283845TCONS_00057181-exon-scaffold_286-1510915933:283667..283845Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:283667..283845TCONS_00057181-exon-scaffold_286-1575043694:283667..283845Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1491911889:284699..285624TCONS_00057181-exon-scaffold_286-1491911889:284699..285624Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1510915933:284699..285624TCONS_00057181-exon-scaffold_286-1510915933:284699..285624Clytia hemisphaericaexon
TCONS_00057181-exon-scaffold_286-1575043694:284699..285624TCONS_00057181-exon-scaffold_286-1575043694:284699..285624Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057181-proteinTCONS_00057181-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:277360..285624 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.86773	3.20875	1.3358	0.781618	8.01046	7.0793	6.99242	8.00199	6.54244	4.92824	6.32001	3.36341	4.74527	4.91104	4.00318	3.6867	4.86406	5.3073	3.32368	3.87853	4.70295	4.77788	3.61583	4.3757	8.79842	9.95482	4.35188	3.8251	3.91079	2.71912
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057181 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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