XLOC_036032 (gene) - C. hemisphaerica

Overview
NameXLOC_036032
Unique NameXLOC_036032
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_286:277360..285624+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_036032 ID=XLOC_036032|Name=XLOC_036032|organism=Clytia hemisphaerica|type=gene|length=8265bp|location=Sequence derived from alignment at scaffold_286:277360..285624+ (Clytia hemisphaerica)
CTTTCAAAAACTCTACCTGGCAACCCAAGAAAGGTAATTTCAATGTGATA
CATTATGCTTTTTACTAACATTTTCATGTGTTCTTAGCTTCATATCACCT
CTACTATCATGCGAATTCATGATCACTAACTCACTCACTgagtacttttt
atttttaatgtacATTGCATTTAATCTTTTAGTCCATCTGTTGTAAAATC
TCCTGTGAAGTCATCTAACAAGGTAATAAAACAGCCCTAGTGGAACTCTT
TTTATACAGTGATGATAAATACTTCTATCGATATTCCaacggggatagaa
attctattgctctaagcttaaaatatccagtggggatggttttgcagtgc
aaatttttacattgaatttctgatgaaaatgaaactctttcactgaagat
tgccatcctggatggcatggaactttgagtatgaaattaacttaaatcgt
tttctttactcaaactaatgaaaatgaaagtcaatttcccagtgggatTG
AAATTGTAAGGTATTTTCCACAGCGTGGACGAGATTTTGGCCAACTTTTC
AGTTGGGCTGGCGCCCCAGCAGGTCTGTAGCACAGGGGTGAAATAAAACA
TCACCGCTCCCGATACCCGCGGTAATACAGTATATCGTCTTTAAaccctt
gtttgtttgtttgtaattgTTATTTATCATGTATTATTGTCATCATCTTA
ATTAAATCTCGTccttattttcttttaattttcagcaAATGTTGGATTTA
CTTTGTGAGATCCaaacacattttttggaatattgTCAAAACACAAATCC
TATGTATACCGTAAGTCGTACTATTCTAttgacgctctttaattcgattt
tcaagggggggGGTTGGATTTCCATCGAATTAAGGaatgtatcgaatagt
agagcatTGTTCTTTTTAGAGTTTCTTTTTGATGGTGactcaatattatc
gaataagggagcgtatagGATAGTAGGgagtcgtttatgagagtttctta
ttGACTGTggttttcaatattatcgaataatggagcgtgtCGGACAGTAG
TGCGTTGTCTATGATAGTtccttgttgacggtgactttcaatattatcga
ataagaGAGTATAAACTGTAAATACTTAATGGAATATTGCGTCTAAGCAG
CGCAGTCATTAGTGTATTTTCAAAACACGCGTTGAAACCCTTGTATACAG
AGGGCCATAAGAGAGGCTCGATACAAACATGTATGACTGTGGCTGATATT
TtccttttatcttttatttcttGCAACTAAACAGTCATTAACGCGTTTTA
GGTTCTATCCCTGGTCAGTACCAACTGGAGAAATCACAATCACATTCCCA
TGAGAATGTTTGACACTATTACAGAGATTTTTTGTAAGGCAGACCTTACA
AAAAGAGAGACCCTACTATTGCAAGCTCCCTTAAAGAGGGAAGCTTTTCG
TTGGAAAACTTTTATCACCTATTTGACCCTTAAAATGGAATTGGAAATTG
AATTGTCGGGAAAAACTTCATCACTAGCCAAAAACTTTCGTTAATTCACC
CTGATTAAGTTTTCccattactcttaggtgccaaataaacgggggggggg
ttcgaataaacgggagggttggaaaaaattttcaaatcaaataaacgggg
ggggggctaattaccgggggggtgGAAAATGGACNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNggggggggcgtttatttggcacctaagagtaaatgTGCAAC
AACATAGTAGATTTCGTACAGTTTTAAGAAAAGAACATTTGTACAAATGC
TCTACTCTACTCTGTCTTCTTTGGCAGGTTCTGTTACTACCAACATTGTT
CCAAGCAATCCACTTGTCAATGACCGACTCCATCAACACTCACCTCATGT
TAAATTGGCAAGTAACTAACCTTTCTTATATCTTATCGGGGGGAAATGTC
GGggaaagtgaagaaatttttccccgaccaaaacttttaccttatttttt
ttccccaaccaaaattcaaatccaaTTTTTTTACGCTTCTGTTAACCGAC
ATTAGTGCTTTAAACatcaaattacaaaatctaTTTTCGAGCTACAATCA
GTgcaataatatattggcaccaGCCTAAAAAAAACACTGGATTTACTCAC
TTCCCTCTCCTAAATCCCATCCCCCTAATTTCAATGGTTGAAGAAGGCAA
CAGGGCTGCAGACTCAACCATTGAAGCTTGGGGGGAGGGAAAATAAGTTT
TAACATTAAAAATCAGTGTTTACTGCCAAATATTATTGCAGTGATTGTAG
ttaaggaaaccatttcatttggacaatttagtcggtTGGAAGTagttaaa
ttgtaaatttggtcggggaaaagtgacgaatttgagaTTTTGGTCGGgtg
acaaaatttttccccgacattttttccccaatAAGATAGTCCTTTCTTAA
CGCTCCCGTGACGTTTTAATCAAATTAgctttttgctttaaaattctATC
TAGCTCGGACGAATAAATCAAGTAAACAAAGCGGCTGGGTGTCGTTTTGC
AACTCTGCtctttcaaacaaaatcttctttCAAAGCTGACGTGTTCCTTC
AAAAAAAGTTGGGAATTTTCCtacctttttttctcaaaaactacAATTTT
CGTTGTAAAAAAGACGCCCGTTTTATGCCGATAAAATAGGCCTCTTTGGT
GGCAGTTGCATCCATTGTTTGCAAAGTCCTGAAGGGGTTTGAAACTCTTG
TATGAGAAATAAAGTAAATTTCGTCTTATCTTAAGCTTAAGAATTCCCTT
CTAGCTCTTccgttttcattttaaaattacCAGAATGTAAACTGAAATtt
caaaaccttcaaaataAGTCCAACATTATTTGCCCAGAAACTCTATGTCT
TAATTCCTGCTGACACCCACTAacagattcgtgctccttacACTTTGTGG
AGGTCTTCGATTCTGACTAAATTTAATTCATATCTGAACCGTATATAATA
TGAATATACTCAGTGtaacttttcttttgttcttttttgatTTCAGCGTC
GATACGATTCTTCAGAAATTGAAAACCAGTGAAACAGCGTAAGTCTGATG
TACATTCACCCATTCTTATATTCTTGCATATATCATTTTCCCATAGCTTC
CAGCCGCATATTTGTTTGACGATTTCTTACCAAACAGGTCGACTATTAAA
AAACATTCAGAGTCTATCTACAATCTATCAAAAATATTATGGCAAGAATT
CCCTTCCCTCTAGTATCAATATTGATGGGTGGAAAGGCTGTCATAATGCT
CAGAAAAAGCTCACATCAACACTGATATATTTGGGGGGGAtagggatttt
tcaagaaattgccacatattttgtcactgattgtagttaTGCCTTAACCT
TTATGGCCACTCTTTGGCTGTAAACCCTGTACTAATTGAAAGCCCTCCTT
TTTGCCTTGGATACCACCAGTAGTAGAAACCTAAGAGTAACGCGACCAAT
GGATGCACCATTTGATAGCACCCATAGAGACGGTTCAATCGGACATAGAC
TTCTCCAATTGTAGATAACGTTTTCCCTTGAGGCTaacaaaaattgtatt
ttaattttccttttttgtacAATTTTCCTTTCTTCTTTTACTTTCAGTAG
TAACCAGAATGTGTTGAGGATTGCATGCACAGAATTATGTAGTGTCCTTG
AAAAAGATGTAAGAAATTATTTCCCAATCCATACTCCATGAGGCGTGAGC
TGCTCTCATGTACCATTGATCTTTGTTAATCCTGGAGACAGTTTCTCAAG
TTCGACAACTAAAatatttgatcggagtttttgtaaaatttggtatccTG
ATGATAGCAATGCTCAATGTCGGTACTACCtttttattgccgacccaagA
AAATATCagtgttttgattggtcaatattttactcgttccgataTTTTAC
CGATAATACGGAAAAATCTTGGAACTCGTAatatatttctcgtattgcac
tcggaGTCATTAGTAATTATTACTTATAGCGACATGGTATTTAAATATTG
GACCTCCGTCGAGCGGGGACCACTTTctaaaaactctgatcaaagatagA
GGGGTTTATTAAATATTGGTCAATAGAATTTGTTCATCAACGACGTTTTa
ctaattttgacgaaaatgcATATTTTCAGCGAATTCTTTAAATTCTAAGG
TTTTTCCGTGTTTGGGGGAATTCAGTATTGTGTGTGAAAATAACAACAGC
CATAAAatattaaattccgcgaaaactACTTATCCCTTCTTGCAACTCAA
CTTTAGGATACAGAAGCAGCTTCTTTACAGCAAGTTGTCAACATTGTGTT
GTTGCTACGTGACGTCATGAAAACATCCTTTCCCTTGGATACCATCAAAA
ACAGCGTGCGGAAGCGCTTACAAAGAGCGGAGAATGATGTGAAGTCTAAA
ACAGCATTTGCAGATGCGAACACACCTCGACCAATGAGCAATAGAAAAGA
TAAAGGTATGTTTgtatgtttgtttgtttgtttgtttgtttgtttgtttg
tttgtttgtttgttgtcaATCATCATTCGTCACGTGCGAGAGTCATATGa
cgtaccttatcggggaaaacttcgtcggggaaaatttttgtcggggaaaa
atattcgtcacttgctggttttggtaaacgcattaaggccggggaaaatt
ttcgtcggggaaaaatattcgtcacttgctggttttggtaaacgcattaa
ggccggggaaaattttcgtcggggaaaaatattcgtcacttggccgaaat
ctcgtcacttttccccgacgaagtttcccccgataaggtacttttCAACC
AAACAAACAAAACTCGATGAAGGTTTTTGTGTAAAAACAgattactttaa
tcggattaactttcgcgatattaaatttcgtgatttcgcgaatttttacc
attttcgcgaaattaaaactcgcgaaaacgcGTGACATTTCCGACTCGCG
GAATGAAATCCaccacaaaaattttaaaatcgcaTTTTCGGCGGAGAAAC
CAAtccaaagttttcaaaactctgactttAAATTagaattaaatgaaatt
aaatccagaaaactTCCCGATTGTTTACGCTCGCAAAATTttatccgatt
aaagtattggtaaaattagtactagtaatctcatggttataagggaaatt
cgggataaatttcccgagtgcaacgagggaaatttaaaacatttcgaaat
ttgaccgagggtaatttatccagaatttcacgaaaacaagcatgggattc
ctggttaatctcggtttggattgaaattttaacaattctgaaagacgtct
atttaacactggaaatcaatctgaaaatttaaaaagaagtcTCAAGAAAG
TCTTAGAAAtgcgaatcgagttttaattggatagtattctatttacttaa
gcctttgaagttagtaagaaagtcgaaaaaggtgatgaatttccaaacga
tgaaaatttcacttctgcgggaaattacaaaatctaggaggggaattaca
aaagctaggagttgaatttcaatcaaccatgagattactattCTGTATTC
ACCAGCTCCTGGCTACTTCATACCGTGGTGGTGAAGAATGCACTTACTGT
TTTATTCGGAGAAAAAAAGAGagtgaaaaaaacaaataagCTCGGCTACT
GAAAATTTAGAGCAGTCTGTagttgtttaaaaaaaagactcagaaaattt
cttttgggtctgaaaattattttttcaccaaGACGGCAATCGGGTCTCGA
ATTAGTTGGGGAAATGTAATTTAATCAGAATAAATTTTCTACCAAAACTG
ATAAATCTACTAAGTTGCCTTTGtgtcagagttttgaaatagCCATACTC
TCCGATTTTTTGTGTCGATATCTGCTCTTTTGGATGAAGCAAAAAATAAA
GACATTTAAACAACTTGAgggttcaaataaaaaacattttttccatcTTT
TTGTCAGGATCGTTAAGTGATGACCGATTATCATTTTCAACGGCTAGTTT
CGATTCTGCGCGTTGCATGACGGAAGATTCCGAGACCTCTGAGAGTGAGG
ACGAAAAAGAGAAGGTTGGAAACGAAGGTGATATGGATGAATTATCTTCA
GATTGGGATTGGAGCAGCGGAGATGAAGACGAAAGGGTAAGACCTAATTA
GTACCCAAACCTCAAATTTCTATTGCTTCGCTATCTTAAGTTTTATTATT
CTACAGCAGTAATCAATCGCCAATATATTGGTGCTCAATGACAGCAAGGA
ACTTTAATAAAACATTTGAAAGTTTGTTGATGAAAGTGATCAAGATTCGT
AggaaaatcaataaataaacTTTTGGCTATGTAATTTAataataattcaa
ttttttggacctacctccggtggggtggaggtcctataaattcagctctg
tccgtccgtccgttcgttaccagcttttctcgagattgaatcataggaat
catttgatttttggtacaaaggtgcaaaatggtggtggccgaaatgtgac
ggagcccgattttcgaaaaaaaaaatttttgggcaaatttgggcaaaaaa
aaaggctaaaaaaagggttttttggactttgtgaaatattggatcgttgt
ttttttctaattctttgcatgaaagtaggtaaaagatggctcaagtagat
ttttgtaaaataacttttcagctcaaaaaacgcatcttcatctataagaa
tcactattaataagcatacatcaatgttcttagccaaattactcaatttt
ttgatgagatagatgtctttttatgctcacgaagtcttgaaaatgaaaga
atatttcaagagcatgaaattttggtttctaaacgttttttttttataag
aaacgactaattttaataaatcgtcactatttgtgttctgaatgattgtt
taacgttcatgctcacgtagatatcaattatatatgtgttaaatgcataa
ccaggtaggtccataaaagtatcacttgttattttCTAGGATGAATCTAT
TGTATTGGACATTCTTGGCAACTTGCAAGAAATCCTGAATCGAACACAGC
CCTCACCTTCTAATCCTCCTGAAATTGTTTTAACCGAACATTGATGAGGT
ACTGTTGGTGGACATTTGATACTGGCAGTCCATCAAGCTTCTCCACAGAT
TTAGTATAATTGTGAAAAGCCTGAAAAACTAACCTCAGAAAATATTCTGC
TTATCAATGCTTATGTCATGGACATTTTTCCACCCATTGAAACTTGTTTC
CATAACTCTGAAACATAAGTCTGGGTGACATTGCGGTGTTTGATGGTAGT
AGTCCCGTTCTACTTTCAGGACAAGCACTCGTGTATTTCAGTGTGGTCGC
CATGTAGAAATAGCAGTGTTTTTTCTGGACAGCACTAAGCGTTCCTAATG
GGAAAAGAAGGAATTCCTACTTCTTCACGAGTAAGACTCTTTCCCCCGAT
AGGGAGGGCTCGTATAATCAAATTTCACTACTAACTACTGTGATCAGAAT
GGAAAAAGTTTTAGATTTGAGAAGTATATGAATAGATTAAAAGGTTGAAC
AACAGTTTGTCCATTTTGAAGTTTATGTTTTCAATACGTTAGTTTTTTGG
TATATGTCTTCAACTGGATTTTAAAACGAGGTAAAAAAATGTGAGGTCAA
ATCTAAGCTACTGTTCATGAAAAGGTTTAAATATAACTATAAAGTTTGTG
AATCTAGAGATCATATAGACATTAAGTCTGTTtgtatatcattgttttta
aattgataGGGTGGTTTACACACGCCAATTTTGTCGGCCAAATTATGAAA
CTTTCCAACAGGTTTTCATCTaaacatgaaggtaataaagatagatggag
agtcaatgccttttgttctattctgatttatcatcggaagcaaacagctg
tttggttgctttggg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00057181TCONS_00057181Clytia hemisphaericatranscript
TCONS_00057182TCONS_00057182Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00057181-proteinTCONS_00057181-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_286supercontigscaffold_286:277360..285624 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.55	3.87	1.34	0.78	8.98	7.35	7.57	8	6.54	7.39	6.32	5.9	4.75	4.91	4.34	5.39	6.1	6.17	3.8	4.47	5.1	4.78	5.3	5.5	10.07	10.95	4.35	3.83	4.95	4.09