TCONS_00057134 (transcript) - C. hemisphaerica

Overview
NameTCONS_00057134
Unique NameTCONS_00057134
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length131

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00057134 ID=TCONS_00057134|Name=TCONS_00057134|organism=Clytia hemisphaerica|type=transcript|length=131bp
CCCAATGTTAAactctttttttgaagtttttttgaaatctttttgttCAC
TTAATATTTTATGTATACATGATGAAGCTGACGACTACCAACAGCTAGCT
TTCAAAGCTcgttttttgaaatcatttgctt
Run BLAST on NCBI

transcript from alignment at scaffold_285:103275..103405

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00057134 ID=TCONS_00057134|Name=TCONS_00057134|organism=Clytia hemisphaerica|type=transcript|length=131bp|location=Sequence derived from alignment at scaffold_285:103275..103405 (Clytia hemisphaerica)
aagcaaatgatttcaaaaaacgAGCTTTGAAAGCTAGCTGTTGGTAGTCG
TCAGCTTCATCATGTATACATAAAATATTAAGTGaacaaaaagatttcaa
aaaaacttcaaaaaaagagtTTAACATTGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035993XLOC_035993Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00057134-exon-scaffold_285-1491911889:103275..103405TCONS_00057134-exon-scaffold_285-1491911889:103275..103405Clytia hemisphaericaexon
TCONS_00057134-exon-scaffold_285-1510915933:103275..103405TCONS_00057134-exon-scaffold_285-1510915933:103275..103405Clytia hemisphaericaexon
TCONS_00057134-exon-scaffold_285-1575043694:103275..103405TCONS_00057134-exon-scaffold_285-1575043694:103275..103405Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_285supercontigscaffold_285:103275..103405 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00057134 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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