|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00057015 ID=TCONS_00057015|Name=TCONS_00057015|organism=Clytia hemisphaerica|type=transcript|length=961bp
TGTTGGAACAAGAATgttctggatggaaaattttcgaaaaattaattgcG
GGGGGACGCCAAGAGTACGCTGGGGAAGCTTTGGTATAACTGGGTTGTAT
AGCTTTAAAATATTAGCTCAAGTAAagctttgatatttttaatgaaGCCA
TGTGgctttttcaattcttcaataaATTCTCTTGAATGTTGAAAACCATA
AAGTTGGAATAATATTTTCTCTATCTACAGCTTcacgtattaaaaaatat
taaaaatatatcATTCATTATTATATCAACCAACAGAATAAAATCTTCTA
GTCTAATTGAGTTTAGCTCGCgcaattttacattttatacaaAATGATAA
ATCGGATGCTTACATACTACATAATATAGCAGCATCATGAAGCATCGTGG
CCAATAAATTCAAAAGATGGAAGTCAACGTTGActtgaataaattttaga
acttattgcataaatttaaattcgcattttttttcaaacaaaagactTTC
AGAGAATATGAAAGAACCGGTAGTGATCTTAGTGATTTCCTATTACGGAG
ATACAAATTTAACAGTTGGAAAAGTTCCGAAATTTGTTTCCACTTCCGTG
CGCCCGCGTTAAAAATATATCTACTAATGTTAATCTCTCTCAAAGATCAC
ACGCAAATCATTATTTGGATATGTTCCAGTAATAAGTATTGAGTTTGGCG
TTTTCGTCTATTAAAAACAATAGTTCAGAAAAGGAATAAAATACTGTAAG
ATGTTGTTCGGATGCCAAAACTTTCAACATATCTGAGTGCATCAGTGGAT
AAAGATATCTTCAAgaggggggtttcagggggtacccgattccgcaattc
cgccaattttttctccaatttccgtcaaaccgtcttaaattgacccaaaa
ttccgtcaccgaaaattcctttgaaattcaatatttttgtcgaaaactCC
GCaaattgtga Run BLAST on NCBI transcript from alignment at scaffold_284:528704..529664 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00057015 ID=TCONS_00057015|Name=TCONS_00057015|organism=Clytia hemisphaerica|type=transcript|length=961bp|location=Sequence derived from alignment at scaffold_284:528704..529664 (Clytia hemisphaerica)
tcacaatttGCGGagttttcgacaaaaatattgaatttcaaaggaatttt
cggtgacggaattttgggtcaatttaagacggtttgacggaaattggaga
aaaaattggcggaattgcggaatcgggtaccccctgaaacccccctcTTG
AAGATATCTTTATCCACTGATGCACTCAGATATGTTGAAAGTTTTGGCAT
CCGAACAACATCTTACAGTATTTTATTCCTTTTCTGAACTATTGTTTTTA
ATAGACGAAAACGCCAAACTCAATACTTATTACTGGAACATATCCAAATA
ATGATTTGCGTGTGATCTTTGAGAGAGATTAACATTAGTAGATATATTTT
TAACGCGGGCGCACGGAAGTGGAAACAAATTTCGGAACTTTTCCAACTGT
TAAATTTGTATCTCCGTAATAGGAAATCACTAAGATCACTACCGGTTCTT
TCATATTCTCTGAAagtcttttgtttgaaaaaaaatgcgaatttaaattt
atgcaataagttctaaaatttattcaagTCAACGTTGACTTCCATCTTTT
GAATTTATTGGCCACGATGCTTCATGATGCTGCTATATTATGTAGTATGT
AAGCATCCGATTTATCATTttgtataaaatgtaaaattgcGCGAGCTAAA
CTCAATTAGACTAGAAGATTTTATTCTGTTGGTTGATATAATAATGAATg
atatatttttaatattttttaatacgtgAAGCTGTAGATAGAGAAAATAT
TATTCCAACTTTATGGTTTTCAACATTCAAGAGAATttattgaagaattg
aaaaagcCACATGGCttcattaaaaatatcaaagctTTACTTGAGCTAAT
ATTTTAAAGCTATACAACCCAGTTATACCAAAGCTTCCCCAGCGTACTCT
TGGCGTCCCCCCgcaattaatttttcgaaaattttccatccagaacATTC
TTGTTCCAACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00057015-exon-scaffold_284-1491911889:528704..529664 | TCONS_00057015-exon-scaffold_284-1491911889:528704..529664 | Clytia hemisphaerica | exon |
| TCONS_00057015-exon-scaffold_284-1510915933:528704..529664 | TCONS_00057015-exon-scaffold_284-1510915933:528704..529664 | Clytia hemisphaerica | exon |
| TCONS_00057015-exon-scaffold_284-1575043694:528704..529664 | TCONS_00057015-exon-scaffold_284-1575043694:528704..529664 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:528704..529664 . |
Blast
The following BLAST results are available for this feature:
|
