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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056963 ID=TCONS_00056963|Name=TCONS_00056963|organism=Clytia hemisphaerica|type=transcript|length=1840bp
cgcgcaactttggtagttggtaggatttgttggcttcaaatcctaccaaa
gagattgacttctagcccttcgggcttatacttcattgcgcTATGCATGT
tggcctccactgatgcaagttacccaacttcacggtatATACATGTACTT
GAATCAGATTAAATTAAGCGACATTAAATTATGTGAGTGAAAAGATTCtg
caaaattttctagatttttttccCGAGGcagagttttgaaaatttttgtg
taaattgatttaattttgcTAACATGCCTGAAAACAGCTGacctgaaaat
aatgaaataccCTCAActaactgctctaacttgggactatctgacaaaac
atgggacagcaattcagccactatttcaccaaaaaagtcatttgatttga
gttaaggaatggcgtatttaaaaatacacaatttctcttttgattttaca
ttatATATAAGtcaaaatacagaccagatatgcaataCCAATAgccccat
gtttcgaccaatcgtcccaagttagagcagttgacggtagccattttttg
ccaCTAATGGAGACTTTTCTTTGGACTGGATTCTCCTCCAAAAAtgcgat
tttaaaaatttgattggttcgatcgtgGATAACGTGGAATgcgatcatta
attttttttttcaaagctaACTTTTTTTGTATTGTCTTGAGTTTGGAAAT
TTAAGAAACTATGAAATGATTAATTAGAACACCAGGCTTCCTAAATTTGC
AGAAACCCCTGACTGATTGACAAAGGCAAGCCATAAATAACTAAAGTAAT
CAACACATTTgcggaatattttttttcctacAAGCCTACAAGGCTCACgc
acaaaaaaaactttgtacCTTAAACTCATATGAAAGCTCTACGTCGTCCA
GCAACCTGATCTTGCAAGATGAGTCTGCATCCAAGGTCATCTTACTACCC
CTCATCTTTTTTGTCGTGTATATTTTCAATGTTTATTGATCAGTTTTCCT
CATGATTTCAAAGTTCCCATTTTGGATCAAACGATCTCgccattttgatt
gtttttgttgACCGGAAAAGAAAAATAGGACCGTAATCAACTTTCCGGAT
TCCTTGACTATAAGAGGGCGGTAGGCGTGTCGTGGCGGTTTACAGTATAG
CAAGGGCTTTAAATTTACGGACTTCATGGTTTAGACCAGCCTTTAAAAGC
TCAGaatcaaaacaagatggcgCATATCGCCAGTGTTGCCAAATCAGCTC
CTGTCACTAAAGTTGCAAAACCTTTACTTTCAGTGACAAATAATGAAGCC
AGACGCAGAGTTTTGAACCTTTACAGATCATGGTGGCGTGAgATTCCACA
CACCATTGAATCGCATGCTTTGGACATGACCGTAAAGCAAGGCAGAAGTA
AAGTGCGTGAAATGTTTGAGTTAAACCGAAACGTCAAAGACATCAGAGTT
ATCGATATGTTAGTGGTCAAAGGCACTCTGGAGCTTGAAGAAACACATCA
GATGTGGAAGCAAAAAACTCACGTATTGAAATATTTCCAAGAAGAACTCA
AGCCAAAACAAAGAGACTTTATGCAAAGGTTTTATGAAGGATATGATTGA
ATTGGTTGAAGCTGTCCAGGTGTTCAAACATACAACTGTGttgttcttca
atttttttgtaaatattaataacaaatattttttaaatgaaatacaTCGA
ATGTGAGAGGTTGAAATATTCCTTATTcgaaattttttatctaaggcgaa
aataaaaaaatgtagtgtttccggaaaccggccgggtggaAAATGACCCG
ACCGCAGACTTTCGTTAggagttgatacattagtattcag Run BLAST on NCBI protein sequence of TCONS_00056963-protein >TCONS_00056963-protein ID=TCONS_00056963-protein|Name=TCONS_00056963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=127bp
MAHIASVAKSAPVTKVAKPLLSVTNNEARRRVLNLYRSWWREIPHTIESH
ALDMTVKQGRSKVREMFELNRNVKDIRVIDMLVVKGTLELEETHQMWKQK
THVLKYFQEELKPKQRDFMQRFYEGYD Run BLAST on NCBI transcript from alignment at scaffold_284:1013792..1023433- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056963 ID=TCONS_00056963|Name=TCONS_00056963|organism=Clytia hemisphaerica|type=transcript|length=9642bp|location=Sequence derived from alignment at scaffold_284:1013792..1023433- (Clytia hemisphaerica)
CGCGCAACTTTGGTAGTTGGTAGGATTTGTTGGCTTCAAATCCTACCAAA
GAGATTGACTTCTAGCCCTTCGGGCTTATACTTCATTGCGCTATGCATGT
TGGCCTCCACTGATGCAAGTTACCCAACTTCACGGTATATACATGTACTT
GAATCAGATTAAATTAAGCGACATTAAATTATGTGAGTGAAAAGATTCTG
CAAAATTTTCTAGATTTTTTTCCCGAGGCAGAGTTTTGAAAATTTTTGTG
TAAATTGATTTAATTTTGCTAACATGCCTGAAAACAGCTGACCTGAAAAT
AATGAAATACCCTCAACTAACTGCTCTAACTTGGGACTATCTGACAAAAC
ATGGGACAGCAATTCAGCCACTATTTCACCAAAAAAGTCATTTGATTTGA
GTTAAGGAATGGCGTATTTAAAAATACACAATTTCTCTTTTGATTTTACA
TTATATATAAGTCAAAATACAGACCAGATATGCAATACCAATAGCCCCAT
GTTTCGACCAATCGTCCCAAGTTAGAGCAGTTGACGGTAGCCATTTTTTG
CCACTAATGGAGACTTTTCTTTGGACTGGATTCTCCTCCAAAAATGCGAT
TTTAAAAATTTGATTGGTTCGATCGTGGATAACGTGGAATGCGATCATTA
ATTTTTTTTTTCAAAGCTAACTTTTTTTGTATTGTCTTGAGTTTGGAAAT
TTAAGAAACTATGAAATGATTAATTAGAACACCAGGCTTCCTAAATTTGC
AGAAACCCCTGACTGATTGACAAAGGCAAGCCATAAATAACTAAAGTAAT
CAACACATTTGCGGAATATTTTTTTTCCTACAAGCCTACAAGGCTCACGC
ACAAAAAAAACTTTGTACCTTAAACTCATATGAAAGCTCTACGTCGTCCA
GCAACCTGATCTTGCAAGATGAGTCTGCATCCAAGGTCATCTTACTACCC
CTCATCTTTTTTGTCGTGTATATTTTCAATGTTTATTGATCAGTTTTCCT
CATGATTTCAAAGTTCCCATTTTGGATCAAACGATCTCGCCATTTTGATT
GTTTTTGTTGACCGGAAAAGAAAAATAGGACCGTAATCAACTTTCCGGAT
TCCTTGACTATAAGAGGGCGGTAGGCGTGTCGTGGCGGTTTACAGTATAG
CAAGGGCTTTAAATTTACGGACTTCATGGTTTAGACCAGCCTTTAAAAGC
TCAGAATCAAAACAAGATGGCGCATATCGCCAGTGTTGCCAAATCAGCTC
CTGTCACTAAAGTTGCAAAACCTTTACTTTCAGTGACAAATAATGAAGCC
AGACGCAGAGTTTTGAACCTTTACAGATCATGGTGGCGTGAGGTAACTTT
TTTTTCATCGAATTTAGCCTTTTCAATTGAATTTCATAGTATAGAAATCG
TCAAAATTTTGAGAGAGATAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCACTAGACACT
TCTAAATTATCTGCCATTATTTCTTCTCTGTCGCACCAAATTCAATTTAC
AGATTTAATTAAATCTATTGTTGTTGTTGTAATGTTATTGTTGTTTATTC
ATTATGACACATTGTGAACTTCCTTTTACTGTATATAGTATTTTCATTCC
ATGTCCTTTCGAACTCGAAAGCCCTTAGGGTTATTTTTCGTTTAGGAGAT
TTTTAAATGTACATAGACCTGAAAAAAGAAAGAAAGATATATATAGAAAG
AATCTGTTACATTATGAAGATGTTCCGAAATTAACCAATCCGGTTTACAA
TCGGAATTCCTCTGGGAGTTAGCGAGTCGGGAGATGTAAAGTTATGTAAT
AGGTAATACATAATTTTTCCGGGGGTTAAACTTATAAATAAAATTGAAAT
GGTTTGTTTTTTTCTTCATTATATATTTAAGTTNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATTACTTACTATCTTTACC
CCCGCTTTTTAAACAACGTCTTCTGTGGGCGTGATATCAGGCGGAGACAA
AACGCCCTCATCGTAAGATTCTCGGGTCGTCTTATTGTTTGTTCTTTTTG
TCGAGTCTGTCGTCAATGTTTGGCGGCATACCTGAAAATAAAAAACAAAA
AGATTATCATATTACTTTTGCATGAATTACGCTACCTTATACGTCATTAT
AAAATTATACAAAACGAAAGCCAGTCTAGGCCGCCCGCCTAGAGCGCGGG
CCCTAATATTTTTTCTCTCGCACTCTTCAGGGGAAAACGAAAGTGATCGA
TATTCTTCGAAGGAAGAATTCGCCAAACAAACCCCTAGACAAAAAGATGT
ATTTTGAAGTTGGGAATGGATCCTGCGAAGATGAAAAAATTTTGACTAGG
CGTTTTTTTGGCAAAGCCAAAAACTCTAATTTTTTTCTTCCCTCAAGCTA
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTATGTGGATAGAGC
AGTAAAAAATACAACTTTTCTATTTTTCCTTTTTTTTTGCAAAAGTTCTA
GGAATGAAAATAAAGGGATAATGATAATTGAATACTATCCATTGATGACC
CACGGCACTATCGTTTAAAGCTAGAATCGCTTCGCTTACTCTTCGCTTGA
GAAAATGATTGACAGATTGAAGTTTTTCACCCGCGCAGGAGTTCGCGGAG
CGTTCTCGGCTCAATCCTCAGACCGCACTAAAAATGGTAGACTGAGCTGT
GATAGATCATTTCGATGGAAGTTGTTGGAATGTTTACAAGGCTCTTTACA
GAAAATCGTTTGTTTTATTGTCAATGATGACAGTGCGGTTATTAATTTTG
TTAGATCTGACAAATTGATGTTTGTAAAGTGCACTTTGTAGTTTTGATTC
CCATTGAAGAATCATATTCTGGTTTTCGTGTTATTAGATGCTGTTTTAGA
GCTTTAGGTCTACACTGCCTGATTTTAAGCTATATAATATGATGTTGGGA
ATACTGTTTTGTTTGGTTACTGAATTTATTCTGGTCTTACTTATTCTGGT
CTGTAAATTTTTGAAGTAGGAAAGGAAAAAAAGCTGATTTAATTAAAAAG
CAGTAGATTTTCACTACCTGTCGGAGAATGGCAACTGAGACAAAAGTTTT
GTGATAACCTTTAATCTAACCTTATCAAACTATCAATGAAAGGTTTTAGC
ACCATATTATAATGAAATTAAGTGTCATTTAACAAAATTAAGGTCGGAAA
GTGGTACCCCAATAAGTATCCCAATTGGTGCACCAATTGGGGTACCATGC
TTTTTAAAATAACCCTCAAATTTGTCTAACATTTTTTGTTGTCAAACAAT
GTCGAACTTAATGTTTTCTTCAAACTTTTTATTAAATACTCACAATTTTA
GCGACCTTTGTAAAGTTCAATTAAAAAATTTAATCAAAATTTAGTCGTTC
GATTAAGGCAAGGGGAATTAATAATAATGAACCAGTTACCGCCGTGTTGC
AAAAAATATTTGATGCAGCAAAATTTCATTATTCATTATTCATTATTTTA
ACCTGGCAGCTTCCCAACTCCAACAACTAGAAATTTCCTGTGTCATCAAG
CTGCTTTCACTTTCAGAATCAAAAATGGATGTGCCTAAAATCACACTACA
CGCCATACAAGCTTAATGAGCGCTTTACTAAGCGCAAGCGTGATCTCGTG
CTTCTTATTGAAAAGCATGTAAAACGCCCATAACTTAAAAAACGTCCACC
TCATTTGCGGGCGTGATTGGAACCATGTTTTTCACAGTGCTGACTCCTTC
TAACGGGTTAATGAAAATTTTTTATATCTGTTAGGGTCATGATCAGTCAT
ACTGCGAGTGGTCCTAAATCCGACAGGCCTGCCTAAATCCGACCCCCCCC
CCCCCAAAATAACTGCTATGAAAAAAATGTTTGCAAACATTCCCTCTCCA
AATTGAACAATAAACTATTGCAAGAACTCTTGAAACAAAACATCTCAAGA
TGACTATAATGTCACAATGTCTGTTAATGTGATCAAAAAAGTGTGAGTTG
TAAAAATAATTATATACCTCTATTATTCTGATTCTGTTGCTCGTGTGTTT
TAAAACGTTAACAATTTTGTAATAAAAAATTATGTTTTGTATAAGAATCA
ATTATATTGTTATTTGATTAAATTGGTTCAGTGAATCAAATCTCTCAGTT
TAGTTGACACTTTGGTATCTTTATTGCGTCACAGTGAACGGTTTGTTTTT
ATTTTAGTTTGTATCTTTGAAAGACCCCATCGGATTTAGACAGGGCTGTC
GGATTTAGGACCACTCACGGTAGTTTCTAGAGGGTCACCCCCCTTAAGTG
CTAGCCCCCCTTAGGAAATTCATTTAAGATTTCACACCCCCCCCCTTAGA
AAACGCAAACTTTATTGGAAAAGAAAAAAATTGAAATTTCGCATAATTCA
AGGAAGATCCCCCCTTAACTGGCAAACCCCCTTAGGAAAGTCATGCTTTT
AACACCCCCCTTGCATTTGGTTCATCAAAACCCAAGACCCCCCTAGATGA
AGGGGGGTAGAAACTATGTCAGTTAGGGTCAGCGATGGAGTTCGAGAGTC
AAAAGAGGGTTGGAAGTAGCATCGGTAGGTAAATATTGGACTCAAGGCCC
TGGTAGGGGCACCCCTAGGGTTGGGGTTAACCCTGGTAGCACTATAGGTA
GATTGTGAATTCGAAATTGTGCCGTGGCTTCATGGTCTAGTGGGTGCGTT
CGGAGCTTCTGAACCGAAGATACTTTTCATGTGTGGGTTTGAATCCCACC
AGGAACTCAACTTTGGTAAATTTCAAAAGAAGCATCCTAAAGATTCAGAA
ACTCCAGAAAACTCCAGATCTAAACATAGTTTTGTGTAGCAAAGGTGCGA
TTTTTGGTTGTTTTGAATGGAAAGACAAGGAAATAAAATGAGCTTCTTAA
AAATAATGAACTTTTTTGAGCAGCAGCTCAAAGGCATGCGGGCGGTTCAT
TAATTCTTGCCCTTGTCTAAGTTCAACAAAGTTTGATTAGCTTGGCAATC
GGAATAGTGGAGATTCAAAGCCGTTGTGACGAAATGGTATGGATTAGGGG
CCGTCCACCTACTTCAGGCGTACAAACTTTAGCGAGCAGAAACTTTCGCG
AGGTCGAAAAATCGCGAAATTTGCGACATTTACTTTCGCAAATTTGAGGA
AAAAATGTTTTTCGCGAGCAGAAACTTTCGCGGATCGTTGGGTAAAAATG
AGAATTTTAGAATAGAAATTGGCTTGAAAGTGACCGCTCAAGACGGTTGC
TATTCGACTTTAAAAAGGCATCAAAGGATAATAATAATATGCCGAAAACT
TGATATTTATTACGATTTCGAGGTTTTATAGATTTCTAGTTTTTTTGAGA
ATTTTTCGCAAGCAATAACTTTCGCAAGTTGCCCTTTTAAGAATTTTCAA
AGACATTTACTTTAGCGAAAACGGCCAAAATTCGCACTAAGGGGGGGGGG
AGTCTTCTCAAAAGCGTATGCTTGCGTACAGGGGGAGGGGGTCAAAGGAA
AATGTACGTACGCAGAGAAAATCTTTTCATAGTCCTTTTTTGCTTGTTTT
TTTGTCGATTTTTACGCTTCTTATACGCATCAAGGAAAAGAAAAAGTTTC
TCAATAAACATTGAGTTTCATGTATGAAACAAGTTTTCTTAAACTGAGGG
GGGGGGGGATTGAAAAACTACGTACTCACCAGGAGGGGGTATAGCCATTT
GCGTACGCTTGTGTACAGAGGGGAGGGGGTATTCGAATTTCGACATTTTA
GTGCCTACGTACTATGTGGGCGGGTGGCCCCATTATATGTTTTATCTCAA
ACATGTAGGTTTAAGCCAAGGCAAAGTTTTCAGAAATAGTCTTGGTTAAG
AATCCAGGTCCCCAATACTGAGACCTGGGTGATAGTGGAAAAATAAGCAT
ATCATTAGCATATCAGTGAGCTTTGGTCATTACTCATTGTTTAGGGGTAC
AAGCCATGGTAATAACTAAATGAAAATACATTGGTCATTATGATTTGAAT
TTCAGATTCCACACACCATTGAATCGCATGCTTTGGACATGACCGTAAAG
CAAGGCAGAAGTAAAGTGCGTGAAATGTTTGAGTTAAACCGAAACGTCAA
AGACATCAGAGTTATCGATATGTTAGTGGTCAAAGTAAGTTTTAATTCAA
AAGCTCTTTACCAGACCAACGATGTAAAAATAATAGATAACCAACTACCT
CTAGAAGGCACTTCTCCCAAGAGAACAACCATTGTTTTCCTATTGAAATG
AGCACTCTATTAAAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACTTTTTACGATGCAAAAT
GTCATTAATATTTTTACAACCGTAACACGGATGTTTTTTGAGAATCAAGG
CAAGTTGGTTATCTATTATTTTTACATCGTTGACCAGACGTTTTTCAGAA
ATACTTTTAGTATTAGTCTAAATTATTAAATTAATTGATCCTCTGTCTAT
ACAAAAGGTGCCCAGATGTAAGAGCAACAGCTAGGAAGGTTAAACCTTAC
TCTTTTTTTTCTGGTCACTTCTTTCATTTTAGCTTTTTAAAATACAGGGT
GATCCGAAAAAAAGGGACGAGCTGGAGTTTTTACAAGATACTTCACTAAT
TGGTCATTTAAAGTGATAGAGATGACGCGTTCTTTAGAAAAAGTAATAAG
ATTCTTTTATTACATCTTAACGACCAACCAAATCAAATGAGAGCTTGTAA
AAACTCCAGCTTGTCCCGAAAAAAACTCCCTTCTATGAATGGAATAAGAT
TTTGTGTATAAGGCAAAGATACAACGGTAATTAAGACTAACCTATAAATT
TTAATTGTAGGTGTAATATGCAAATCACGTTAATGCAGCTGTGGAATAAT
CCGAAAATATTTCTTTAAATTAAAAATAGTAACTATTTAGATTTTGATGA
TACAAGTGTTACACAAAGAAATTCTACTTAGTGGTTTGACACCACTGGTT
ATTTTTTCGGCACACCCCGTGAGTGTGCTGTCTGAATTCCAAAAATACTG
AAAATATTAAATTTATTTCTAAGGGCACTCTGGAGCTTGAAGAAACACAT
CAGATGTGGAAGCAAAAAACTCACGTATTGAAATATTTCCAAGAAGAACT
CAAGCCAAAACAAAGAGACTTTATGCAAAGGTTTTATGAAGGATATGATT
GAATTGGTTGAAGCTGTCCAGGTGTTCAAACATACAACTGTGTTGTTCTT
CAATTTTTTTGTAAATATTAATAACAAATATTTTTTAAATGAAATACATC
GAATGTGAGAGGTTGAAATATTCCTTATTCGAAATTTTTTATCTAAGGCG
AAAATAAAAAAATGTAGTGTTTCCGGAAACCGGCCGGGTGGAAAATGACC
CGACCGCAGACTTTCGTTAGGAGTTGATACATTAGTATTCAG Coding sequence (CDS) from alignment at scaffold_284:1013792..1023433- >TCONS_00056963 ID=TCONS_00056963|Name=TCONS_00056963|organism=Clytia hemisphaerica|type=CDS|length=1152bp|location=Sequence derived from alignment at scaffold_284:1013792..1023433- (Clytia hemisphaerica)
GGCACTCTGGAGCTTGAAGAAACACATCAGATGTGGAAGCAAAAAACTCA
CGTATTGAAATATTTCCAAGAAGAACTCAAGCCAAAACAAAGAGACTTTA
TGCAAAGGTTTTATGAAGGATATGATTGAATTCCACACACCATTGAATCG
CATGCTTTGGACATGACCGTAAAGCAAGGCAGAAGTAAAGTGCGTGAAAT
GTTTGAGTTAAACCGAAACGTCAAAGACATCAGAGTTATCGATATGTTAG
TGGTCAAAATGGCGCATATCGCCAGTGTTGCCAAATCAGCTCCTGTCACT
AAAGTTGCAAAACCTTTACTTTCAGTGACAAATAATGAAGCCAGACGCAG
AGTTTTGAACCTTTACAGATCATGGTGGCGTGAGGGCACTCTGGAGCTTG
AAGAAACACATCAGATGTGGAAGCAAAAAACTCACGTATTGAAATATTTC
CAAGAAGAACTCAAGCCAAAACAAAGAGACTTTATGCAAAGGTTTTATGA
AGGATATGATTGAATTCCACACACCATTGAATCGCATGCTTTGGACATGA
CCGTAAAGCAAGGCAGAAGTAAAGTGCGTGAAATGTTTGAGTTAAACCGA
AACGTCAAAGACATCAGAGTTATCGATATGTTAGTGGTCAAAATGGCGCA
TATCGCCAGTGTTGCCAAATCAGCTCCTGTCACTAAAGTTGCAAAACCTT
TACTTTCAGTGACAAATAATGAAGCCAGACGCAGAGTTTTGAACCTTTAC
AGATCATGGTGGCGTGAGGGCACTCTGGAGCTTGAAGAAACACATCAGAT
GTGGAAGCAAAAAACTCACGTATTGAAATATTTCCAAGAAGAACTCAAGC
CAAAACAAAGAGACTTTATGCAAAGGTTTTATGAAGGATATGATTGAATT
CCACACACCATTGAATCGCATGCTTTGGACATGACCGTAAAGCAAGGCAG
AAGTAAAGTGCGTGAAATGTTTGAGTTAAACCGAAACGTCAAAGACATCA
GAGTTATCGATATGTTAGTGGTCAAAATGGCGCATATCGCCAGTGTTGCC
AAATCAGCTCCTGTCACTAAAGTTGCAAAACCTTTACTTTCAGTGACAAA
TAATGAAGCCAGACGCAGAGTTTTGAACCTTTACAGATCATGGTGGCGTG
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056963-exon-scaffold_284-1575043694:1022092..1023433 | TCONS_00056963-exon-scaffold_284-1575043694:1022092..1023433 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1575043694:1015100..1015228 | TCONS_00056963-exon-scaffold_284-1575043694:1015100..1015228 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1575043694:1013792..1014160 | TCONS_00056963-exon-scaffold_284-1575043694:1013792..1014160 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1510915933:1022092..1023433 | TCONS_00056963-exon-scaffold_284-1510915933:1022092..1023433 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1510915933:1015100..1015228 | TCONS_00056963-exon-scaffold_284-1510915933:1015100..1015228 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1510915933:1013792..1014160 | TCONS_00056963-exon-scaffold_284-1510915933:1013792..1014160 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1491911889:1022092..1023433 | TCONS_00056963-exon-scaffold_284-1491911889:1022092..1023433 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1491911889:1015100..1015228 | TCONS_00056963-exon-scaffold_284-1491911889:1015100..1015228 | Clytia hemisphaerica | exon |
| TCONS_00056963-exon-scaffold_284-1491911889:1013792..1014160 | TCONS_00056963-exon-scaffold_284-1491911889:1013792..1014160 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_284 | supercontig | scaffold_284:1013792..1023433 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR008011 | Complex1_LYR |
| IPR016488 | NADH_Ub_cplx-1_asu_su-6 |
Blast
BLAST of TCONS_00056963 vs. Swiss-Prot (Human)
Match: NDUA6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 6 OS=Homo sapiens GN=NDUFA6 PE=1 SV=3) HSP 1 Score: 139.043 bits (349), Expect = 4.319e-38 Identity = 63/129 (48.84%), Postives = 90/129 (69.77%), Query Frame = 2
Query: 1211 NKMAHIASVAKSAPVTKVAKPLLSVTNNEARRRVLNLYRSWWREIPHTIESHALDMTVKQGRSKVREMFELNRNVKDIRVIDMLVVKGTLELEETHQMWKQKTHVLKYFQEELKPKQRDFMQRFYEGYD 1597
KMA ++ + KP+ S NEA+RRV LYR+W+RE+P+T+ LD+TVK GR KVREMF N +V D RV+D+LV+KG +ELEET ++WKQ+THV+++F E P+ +DF+ +FY G+D
Sbjct: 25 GKMAGSGVRQATSTASTFVKPIFSRDMNEAKRRVRELYRAWYREVPNTVHQFQLDITVKMGRDKVREMFMKNAHVTDPRVVDLLVIKGKIELEETIKVWKQRTHVMRFFHETEAPRPKDFLSKFYVGHD 153
The following BLAST results are available for this feature:
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