TCONS_00056945 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056945
Unique NameTCONS_00056945
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1901

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056945 ID=TCONS_00056945|Name=TCONS_00056945|organism=Clytia hemisphaerica|type=transcript|length=1901bp
TTTAGGAGATTTCATTTTTAGTGGGATTCATATATACAATACTTGGAGGC
CACGGTATCATTTTCTTATTGTTTTAGTGGGTAAAAGACGATAAATATTC
TCATAAACTAAAAAACCATGGCTGCTCCTATACAACAAATTTCAAATGGC
GCTATACCAATTATGTCTGGTGTTGCAGGAACTCCAGTTCAACAGCCAGC
TGTTGTttaccaacaacaacaaccaatgATTGTCGCAGGTGCTGCTCCGA
TGGGTTACGCACCACGAAAGCCCTACATCAGGAATCCGAATGAGGAGCAT
TGCAAAATCTTTGTCGGAGGTGTTGGTAAATTGACAAATGATGAATCTCT
TAGAGCCTACTTTGGAAAATTCGGAGAAATTGCAGATAGTGTTATAATGA
AAGATAAACATACAAATGAGCCAAGAGGGTTTGCATTCGTCACATTCAAA
ACACCAGAAGCTGTTTCAGCTGTCATTGAACAAAATAATAAAGGTGGACA
TACTCTTGATGGAAAAATGTTTATTGAAGTACGAAAGTTCCAGAGAAAAT
CTGAGtatgACCCAGATAAGGCCAACACAACTCTTACTACTGCCAATGGT
GCTGCACAACTTAACTTTCAATACAAAGGTCCAATGAAGTGCTCACCAGA
AATGAAAGTTTTTGTTGGTGGAATTGGTATTGGTACAACAGAGGATGatg
taaagaaatattttgaacaatttgGAAAGGTCCTTGCTGTCGATATGCCT
GTTCATCATGTGTATAAATGTCCCAAAGGTCGAAGTAAAAGGCTCAGATG
AGCAGCAAGCACATTTGAACAAAAAGAAGGCTGAAGCTATCCGGTATGCT
TCTGCTGGAAGAGGTAGAGGAATTGGATCAGGAAATATTGGAACAGTGAC
AGGATACGGTGCATATGCAAACCTTGGTCAACCATTAATCGTAAACCCTG
CTCAACATAGTGTACAATATACAGtTCCTGCTGCAGCAACTGGTGGATAT
GTGTATGATCCCGCATCTAATACGTATTATCAACTCCCTGGAACTGTCGT
CGCTGGTGGTGCAGTTGCAGGTGCAGTGCAAACGGTAGGAACCTCAGTCG
CAGCTGCCTCCCCATACGCTGGTGCAACCATCGCAGCAGGTCAACAAGTC
TTAACTTCTCCACAAGTTGGTCAGCGAACGTTACAAGCAACTGATATGAT
CCAAGGACTAGCAGCAGGCTCAACAGTTGCCTTGGGCGCAGCGTATCCAA
GCGAAACATCAACCTTTGGGCCAACTCGACATAACGTGATCGGAGCCAGT
GCGCAACAACCGATGGCAGGAAACACAGTCGCCGATCCTCACGTCGTCTA
TTCTACAGCAACATCTATTTCTGCTGGCGATGCTGCTTTGTCAGCGGCTC
GTGGTTACCACCCTTATGGAAGATAAGATATTGAacttcaaaactgaaaa
aagagaCTTCAATCGTACTTTGATCTGTACGTAAAGAAGAAAGCTTTGAA
AGACTCGATCTTCACTCATGGACAGcgattttgtaaataaaaactttttt
aatctattgattgattgatgctTTGTCAGTTGGTTCTTCGATACGTGATA
ATCATATTGCTCTTTGGTGACAATTCGGTTTTataaatgaaaagacattt
tattGGATTTGTCTACGCCATGCACAATGGATGTAGATATTTTACGCGAT
AATTTCATTTGAATGAACAATTTTTAACGTGAGAACTTTATGGACATGCG
CGatatttctctctttttatttgaaagaaaatttattcaatggaattaca
aaatattttgattgtttatccatttcttatttttttatcgGAATTTTCTT
TACTTACTATTGAGTCCACTTCCACATCAGCTTAGTTTGAGATGTGTAGG
G
Run BLAST on NCBI

transcript from alignment at scaffold_284:879845..888737-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056945 ID=TCONS_00056945|Name=TCONS_00056945|organism=Clytia hemisphaerica|type=transcript|length=8893bp|location=Sequence derived from alignment at scaffold_284:879845..888737- (Clytia hemisphaerica)
TTTAGGAGATTTCATTTTTAGTGGGATTCATATATACAATACTTGGAGGC
CACGGTATCATTTTCTTATTGTTTTAGTGGGTAAAAGACGATAAATATTC
TCATAAACTAAAAAACCATGGCTGCTCCTATACAACAAATTTCAAATGGC
GCTATACCAATTATGTCTGGTGTTGCAGGAACTCCAGTTCAACAGCCAGC
TGTTGTTTACCAACAACAACAACCAATGATTGTCGCAGGTGCTGCTCCGA
TGGGTTACGCACCACGAAAGCCCTACATCAGGAATCCGAATGAGGAGCAT
TGGTAANTTACGCACCACGAAAGCCCTACATCAGGAATCCGAATGAGGAA
CATTGGTAAGGGAGCTTTTGAAAAATTGACTTTTTAATTTATCCATTATA
CAGTTATACTTGAAAAAAAGAGCTCTGGGAAAATAACCATTGTGTCTTCA
AAAGACCAACTGTATTAGTTCCATAGGGAAAAATTCATGGTTGTTGGACT
TGCAAATACGTGTGTCAGTGTACCAATCAAAGGAAATTCGTTTTTACCAA
TGTTACTTTTTTCTATATCTAAAGAATTAGTAAACGTTTTAAAATCTGTA
AAAAGCTCTCTACTCCCAAATAGTTCTAGATTACCAGACAATCTCAATCA
AACAGAATCGACGATCGAACCAGTCGAATGCAATCGAATCTCAATCGAGC
GTCAAAATTCTGGGTAATATTCGATAGGTTCGATTGTTGTTCAACTGGTT
CGATTGTCGTTCAACTACATTCGATTGTTTGAGTGAAACAAGGCATGTCC
TAAATATATTTTGCGTGATGCGCACCGCTTCCCGTTATTCCTCCTTAACT
CTCATATATAGCTCAAAAGAATCGAATCAACAAGAGGATTTCGAAAAGGG
TCAGCTTTTTAACAAAGATTAGTCTCTCTAAGGGTCAGGTCCTAATCAAA
CGCAATCGAACATCAATCGAACGCAATCGAATATCAATTGAATCTGAAAA
TTGTGAGATTCAATCGCGTTCGACAATCGAATTTCAATCGGTCGATTGCG
TTCGATTTGGTTCGACTGGTTCGATCGTCGATTCCATTTGATTGAGATCG
TCTGGAGATGAAACCCTGCAAAAACCATGTTCAATCTTATCGTTTCGTTG
GTATTGGAAACCAAGGAAATTCGCAAAAAATTTATTTCTCCCTTTTTTAG
CAAAATCTTTGTCGGAGGTGTTGGTAAATTGACAAATGATGAATCTCTTA
GAGCCTACTTTGGAAAATTCGGAGAAATTGCAGATAGTGTTATAATGAAA
GATAAACATACAAATGAGCCAAGGTAAGTGTCAGCATAAACATATAAACA
ACTGGACATCCATCTCCTTTCTTGTATTTTTGAAGATAACACTGCTAGCT
TCGTTGCCGCCTCATTAAAATCATAAAACCTAACAATAAATTTTGGTATA
CCTCTTGGGAATACCTTGGTAAAACCTCAAAACTTCAACAAAAGTCTCTG
TTGTTCTACTCTTCTCAAGTCTTATCTATATCATAACCAAGATAACTGAG
GCAAAATCATTGTCAGCTTGTCAAAATTCTGACTAATATTTTTAAATTTA
GACTCAAAAGTATGGAATAATTTTAGAGAGTATGGGATTCAAATTATGAT
AATCTCATGGTACAGGCTCTCAACTTTGGCGTACTATTTTTTTCATGTCA
TAAAAAAATTATTAGAGTGACAAAAGGGATGCAAAAGTATACACGCAGTT
GATAAAATACTTATGCAATGTCAAGCTCTATCAATCCTTTTACCTTAGTA
ATTCCAATAAAATGAAATTGTGACGGAATATTGTAGAATTTTATATATCA
ATCAGGGCTGCAAATAAGCATCGGTCATCGGTCAATGTCCGACTGAAAAA
GCCATTTGACCGACTGAAAATCATTTGTGTCGGTCATGATGTCCGAATGA
AAAAAAAACATTAATTTGAGTTGAAAACAAATCTTTCACACCCCTGTCTC
TTTGTCTATTATTACTACTCTTTTACTTTCTTTTAGCTTTCAAGAGTGTT
TCTAAAGTTTACTTTGATTTCATGCGTTTTTATTTTTATCGACTTGCTTT
CTTTGTAACTTTCATCAGTGTTTCTAAGTTCACTTTTTATTGACTTGCTA
TCTTTGTAAACTTTCAAGAGTGTTTATAAGTTCACTTTTTATCAACTTGC
TTTCTTCGTAACTTTCAAGAGTGTCTCTAAGCTCACTTTTATCAACTCGT
TATCGTTGTAACTTTCAAGGGTCTTTCTAAGTTCACTTATATCGCATTGC
TTTCTTCGTAACTTTAGAAGTTCCAAGGTCACTTTTACCTACTCTCTTTC
TCCATAACTTTCAAGACTGTATGATTTCAGAAAACTTATAGACTGAATGA
CCGACAGGATTTAGAGCTTGACCGACAGAATTTCATCTCAGTCCCGACAT
GATGTCTGATTGACTAGAAATATTTATTTGCAGCCCCGATCAATTTTTTA
ATACAGTGGGTAACAAAGCTCGCTTCAAAGACACAATGGAAGATAGTCGT
CCAGTCGTTTATATGTTCAGACAAAAAATTTGAGCCTTGCTAACAGTATC
TTATGAAAAACTTTGTTTTAAAAAACGTTTTAAATTAAAAAAGCAATGGT
GAAATGCTGAGTCAGCAGAAAAGTAAATTGCTGTTTTTGGAAGGAACTTA
TGCATTGAGCAATGATCATCTAAAAAAATTACTTTCCAAAACTCCAAAAA
AGAGCAATAATTGCTGTTTTTATCTCATATACCCCACTGTATATTTTCAG
ACTGAAGAGAAAAACCCTTTTCTTTTGTTATTTCATGATATCTTTTACCT
GTTCATTAATTTCACAGAGGGTTTGCATTCGTCACATTCAAAACACCAGA
AGCTGTTTCAGCTGTCATTGAACAAAATAATAAAGGTGGACATACTCTTG
ATGGAAAAATGGTAGGTTGTAATGTCTGAAAGAAACTCTACATTATATAA
TGACAAGAAAAAAATGACGTTTCTATAAGAGAATCATTCTGTGTTTTTTA
TACATTTTGGCACACCTGCAATATTGCCAATATATTGAAGTAGTTTTGGT
TTCATTTTTAAAACTTAATTTGGTTGCTTCATACAGAGAAGTAGGATGAA
ATAGAAAACCAGCTTCCTTGACTACCCCATGCCTTTGTTTTAGCTTTATT
AATAAGGTTAGTTTGATTAGGAAAAGTTGAAGAAAAGATGGCTTGTCCTA
AAAATGGCTGGCCATAAAAGTGGATTTGCGTTTTACATTTGTGCACCTAC
CTGCTTTTCAATAAGATGTGCGCAATCCCGTGTGAAGTAGCAAATTTTAC
ACCATTTTATTGCCTAAAAATTCTCGTTGTAATGATATTGATTTGTTTCA
ATAATATTTGGTCCAGTTTCGGGGAAAGCAATCATTAGAATTGTTAATGT
TAGGATATTGTGAGCAAGAAAATAGGTATCTTGTGGTCTGAGTGAGGTGT
TCCCAAAATATAAGCCCCTAAAGTTTAAGCCTAATTAGACTCAAACAAAA
GACTTCCACCACATCACCTCCCTTAAGGGCAAAGGACCTGGTACATGACG
AGCCGTGTCTTCAAGAAGCTGTTTTTCTATCTCATTGCACTTCTCTGCTT
CATATCTTTGATATCTGGGTTGAAAGAAAAATTATAAAAAATTATATTTT
GTTTGTATTGAGCCTTTCACTGACACTGCTGAGATGGATTGAAAATATGT
TATTTTGAGTTTGGAACAGGTTGGAAACATTTGTTTGAGGCTAGGAAGGT
CTGGAAGATAAAAGAGTTCTTTTTTCTTTCCTTTACATAGTTTATTGAAG
TACGAAAGTTCCAGAGAAAATCTGAGGTGAGATCAAGTTTCTGACTTCAT
TATTGTTGTTATTCTTTGAAGGTTGATCCTAAGCCAGCTGTCCCTCAAGG
TCCTGGAGTTCAAAATAAACCCTTGGTAAGTTTTTTAAGTCAGTCGATCT
CTGGATCTTTGATATTAATGCCCTATCTACTTGATTTTTACTGAATGACA
CAAGATGAGTCTTAGACTTTTGTTTATTTATTTTTTGTCTCATTACAGTT
TTTGAATATTTTTCATTTTCAGTATGACCCAGATAAGGCCAACACAACTC
TTACTACTGCCAATGGTGCTGCACAACTTAACGTAAGAATTAAAAATCTT
GGTATCAATATTGTTACATTTTGCATGCAAGTCAGTTTCAAATTATGTCT
AAATCAGCAATGCCCTCAATTGAAGTTGATAAATGCTTTGCTATGACCAC
TGGTGTTTGATCAATAATTTAAATCAAAACTTTTCTTTCTTGAACAGTTT
CAATACAAAGGTCCAATGAAGTGCTCACCAGAAATGAAAGTTTTTGTTGG
TGGAATTGGTATTGGTACAACAGAGGATGATGTAAAGAAATATTTTGAAC
AATTTGGAAAGGTAATTTGAACTTTTTTCTCTTCAAATACTCCTTCAAAA
TTAAAAAAACAAGGAATGTTTTGAAAATAAGACATTTAAAAATCTTAATT
TCTTATCCTTCAGGTCCTTGCTGTCGATATGCCTGTTCATCATGTGTATA
AATGTCCCAAAGGTATGTTTATTATTCAGAATTTCGGACTTTATGCCCCT
CAAATATCCAAGTTTACGAAAATCACCATATTTTTTGATCCACACAAAAA
CAATTAACAATGCAAAAAAGTTTAACCCACGCAAATAAATTTTTGAACTT
CGCAAAAAAAAATTTGACCGTCCATAAAAAAATTCTACCCACATGTCCAT
TCAACCCAAGCACCCACTCAACCCACACCCGTCAAATCCATACCAGGGTA
GAATAACTGATTTTAGAGAGGGCTAACTAACTGTGATTTAAAACTTAATC
ATTTTCCTTTCCAACAATTTGTTGACTAGGCTATAAAAAAAAAAAAATTC
TATCAATTCATTTTCTGCTACATCTGGTTGTAATCATACTTACAAATTCC
TTAAAATTTTGTTTTGGTATATATGTTTTTGATAAGGGATATGGTTATGA
AGTATAAGCTTTTCTTGGACGGGTAACTGACCTCAACTTGTCCGTGCACA
AGATTACTATCATCCCTATTACTATTTTCAGCTTTCTATCTGCTTGAGCC
AATTTTATTTTATATTGATTTATAATTAGTAGAAACCTAGTTGCACACCT
TTGCATTTAACTCTAGACAAAATATATTGACAGAACTCATATATTTTAGA
TGTTTAAATATTTACAATTAATGAAAAATAGCCACAGCACAACTTAGCCT
GTTTTTTAAGTAACCAAAATATTATATTTGAGATCAGAATATTAACATTT
TGAATAACATTTGACATTACTAGAATTTTTGACCTTCAAAATCTAAAAAT
ATATACATCATTTTATGATTTTATACTTAAAAGTATTTTAACTAAGAACT
TAATAGTCCCATATGCCATTAATCAATGTTTTTGAATGTATGAATTTACT
ATGTCTTCTTTTTAGCAAAATATTTCTAATTTATGATTACCTAATTAGGC
TTTGCATTTGTTGGATTTGAGACATTTGATGTAGTTGCAGCTGTAACAAA
AGATCGATATCATCAGATAAATGGAAAAACGGTGTGATATAAAATATTTT
AATGTTGTTTTACCAATTATTTTTTCAATTCTTCGTAATTTATAATCAAT
ATTTTTAAAAAGTTTCAGGTATTTTCACTATTTTGACTGACACTGTAACT
AATTTTAGTTCAGCTCTTTTCAGAAATTTTACCACTATTTTTCTGTTTGT
TTCTAGCCTTAGACTTTAATATTGTTTGAATGTTATTTTGCAATCATTTG
TTCAGTATTTTTGTTTTTCTGAAAAGCTAATTTTTGCTTATTTTTTAGAT
TTTAAAATTTGCCTTTTTTCAGTCAGTNTTATATTGATTTATAATTAGTA
GAAACCTAGTTGCACACCTTTGCATTTAACTCTAGACAAAATATATTGAC
AGAACTCATATATTTTAGATGTTTAAATATTTACAATTAATGAAAAATAG
CCACAGCACAACTTAGCCTGTTTTTTAAGTAACCAAAATATTATATTTGA
GATCAGAATATTAACATTTTGAATAACATTTGACATTACTAGAATTTTTG
ACCTTCAAAATCTAAAAATATATACATCATTTTATGATTTTATACTTAAA
AGTATTTTAACTAAGAACTTAATAGTCCCATATGCCATTAATCAATGTTT
TTGAATGTATGAATTTACTATGTCTTCTTTTTAGCAAAATATTTCTAATT
TATGATTACCTAATTAGGCTTTGCATTTGTTGGATTTGAGACATTTGATG
TAGTTGCAGCTGTAACAAAAGATCGATATCATCAGATAAATGGAAAAACG
GTGTGATATAAAATATTTTAATGTTGTTTTACCAATTATTTTTTCAATTC
TTCGTAATTTATAATCAATATTTTTAAAAAGTTTCAGGTATTTTCACTAT
TTTGACTGACACTGTAACTAATTTTAGTTCAGCTCTTTTCAGAAATTTTA
CCACTATTTTTCTGTTTGTTTCTAGCCTTAGACTTTAATATTGTTTGAAT
GTTATTTTGCAATCATTTGTTCAGTATTTTTGTTTTTCTGAAAAGCTAAT
TTTTGCTTATTTTCTAGATTTTAAAATTTGCCTTTTTTCAGTCAGTCATT
ATTCAGTATTACTGTTCTAAACTGAATTTTGAGATTGGTTTATTTTGTTG
TAGGTCGAAGTAAAAGGCTCAGATGAGCAGCAAGCACATTTGAACAAAAA
GAAGGCTGAAGGTATGAGTGAGTACCAGAACTTTCTTATTATTTTAATGA
TTACCTTTCGAATGCTCAAATACTGATTCTCGTCTACGGGAAGGGTTTTT
TTCAAATGACCTTCTTGATTTATTTGCGAATTAAATACCTTAAGGAAAGA
AATTTTTGTGGAACAAGTTTTTGACAAATCCGCGAAATAAGAATATTATC
ATGATTTAGACAGGTTTAGAAAATAACCTATAGTATTAGTGTTTTTGGGG
CAGAATAAGCCATATTTAAACAAAAATTTGTCTCAACCGCAAAATTAAAT
TCTGTGAAACTTCTGAATTTTGAGCTGTGAACTGCGAAATTAAATTCCAC
AAAAATTTTTTTCCGCAGAGATTTCTTCCCTTAAGGTAACAACAAACAAG
GAATTGAAATGAATTTATCTTAAATATTTTGCTTTTTTTTCAGCTATCCG
GTATGCTTCTGCTGGAAGAGGTAGAGGAATTGGATCAGGAAATATTGGAA
CAGTGACAGGATACGGTGCATATGCAAACCTTGGTCAACCATTAATCGTA
AACCCTGCTCAACATAGTGTACAATATACAGGTAAGAAGTTAGTTAGCAA
AACATATTTGCTATAAGCCTTAAATATCAACACTGATCACACCTTGGTAA
AAGGATTAATGAATTATAGACAAAAGTATGTTAATTAGGGTTTAAACTGG
TGTAAATAATGTTTTTTTTTTTTTTCAACCTGATAAAAAAAGAAATAAAA
TAATTGATTCGACAAATCCTTTTGAACCTTCAGTTGCTTTTTCATTACTA
TTTTGTTTTTTTCTCAGTTCCTGCTGCAGCAACTGGTGGATATGTGTATG
ATCCCGCATCTAATACGTATTATCAACTCCCTGGAACTGTCGTCGCTGGT
AAGACTATCACTCAAATTTACCAGATGAATGCACGTCAAAATATTTCAAA
ACCTTATTTTATAAAAAATTACTCAATAGTAGGTTTTAAAATAGATCACT
CTTTGGTATCTGGTCAAAAATATAAGCTCGATAAAATCGCGAAATTTAAT
CCCCGTTAAAGTTTATCCCATTAAAGTAGTAACAAAATATTTCTGTAATT
AACAGGTGGTGCAGTTGCAGGTGCAGTGCAAACGGTAGGAACCTCAGTCG
CAGCTGCCTCCCCATACGCTGGTGCAACCATCGCAGCAGGTCAACAAGTC
TTAACTTCTCCACAAGTTGGTCAGCGAACGTTACAAGCAACTGATATGAT
CCAAGGACTAGCAGCAGGCTCAACAGTTGGTAAGTGAGTAATCTACGTAA
GTCATCTCTTGAGAATAACTTTTAAAAGTTTGAGTGTCCAAAAGTTCTAA
GTAAACATCATAGATCAATAACAGTACTTTGTATGTATATGATATTATCA
ATCATATTATCATATTTTTAGCCTTGGGCGCAGCGTATCCAAGCGAAACA
TCAACCTTTGGGCCAACTCGACATAACGTGATCGGAGCCAGTGCGCAACA
ACCGATGGCAGGAAACACAGTCGCCGATCCTCACGTCGTCTATTCTACAG
CAACATCTATTTCTGCTGGCGATGCTGCTTTGTCAGCGGCTCGTGGTTAC
CACCCTTATGGAAGATAAGATATTGAACTTCAAAACTGAAAAAAGAGACT
TCAATCGTACTTTGATCTGTACGTAAAGAAGAAAGCTTTGAAAGACTCGA
TCTTCACTCATGGACAGCGATTTTGTAAATAAAAACTTTTTTAATCTATT
GATTGATTGATGCTTTGTCAGTTGGTTCTTCGATACGTGATAATCATATT
GCTCTTTGGTGACAATTCGGTTTTATAAATGAAAAGACATTTTATTGGAT
TTGTCTACGCCATGCACAATGGATGTAGATATTTTACGCGATAATTTCAT
TTGAATGAACAATTTTTAACGTGAGAACTTTATGGACATGCGCGATATTT
CTCTCTTTTTATTTGAAAGAAAATTTATTCAATGGAATTACAAAATATTT
TGATTGTTTATCCATTTCTTATTTTTTTATCGGAATTTTCTTTACTTACT
ATTGAGTCCACTTCCACATCAGCTTAGTTTGAGATGTGTAGGG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035868XLOC_035868Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056945-exon-scaffold_284-1575043694:888436..888737TCONS_00056945-exon-scaffold_284-1575043694:888436..888737Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:887415..887537TCONS_00056945-exon-scaffold_284-1575043694:887415..887537Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:885777..885870TCONS_00056945-exon-scaffold_284-1575043694:885777..885870Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:884862..884897TCONS_00056945-exon-scaffold_284-1575043694:884862..884897Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:884556..884615TCONS_00056945-exon-scaffold_284-1575043694:884556..884615Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:884277..884390TCONS_00056945-exon-scaffold_284-1575043694:884277..884390Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:884126..884174TCONS_00056945-exon-scaffold_284-1575043694:884126..884174Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:881927..881984TCONS_00056945-exon-scaffold_284-1575043694:881927..881984Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:881357..881494TCONS_00056945-exon-scaffold_284-1575043694:881357..881494Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:881040..881120TCONS_00056945-exon-scaffold_284-1575043694:881040..881120Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:880659..880832TCONS_00056945-exon-scaffold_284-1575043694:880659..880832Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1575043694:879845..880516TCONS_00056945-exon-scaffold_284-1575043694:879845..880516Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:888436..888737TCONS_00056945-exon-scaffold_284-1510915933:888436..888737Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:887415..887537TCONS_00056945-exon-scaffold_284-1510915933:887415..887537Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:885777..885870TCONS_00056945-exon-scaffold_284-1510915933:885777..885870Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:884862..884897TCONS_00056945-exon-scaffold_284-1510915933:884862..884897Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:884556..884615TCONS_00056945-exon-scaffold_284-1510915933:884556..884615Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:884277..884390TCONS_00056945-exon-scaffold_284-1510915933:884277..884390Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:884126..884174TCONS_00056945-exon-scaffold_284-1510915933:884126..884174Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:881927..881984TCONS_00056945-exon-scaffold_284-1510915933:881927..881984Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:881357..881494TCONS_00056945-exon-scaffold_284-1510915933:881357..881494Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:881040..881120TCONS_00056945-exon-scaffold_284-1510915933:881040..881120Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:880659..880832TCONS_00056945-exon-scaffold_284-1510915933:880659..880832Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1510915933:879845..880516TCONS_00056945-exon-scaffold_284-1510915933:879845..880516Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:888436..888737TCONS_00056945-exon-scaffold_284-1491911889:888436..888737Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:887415..887537TCONS_00056945-exon-scaffold_284-1491911889:887415..887537Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:885777..885870TCONS_00056945-exon-scaffold_284-1491911889:885777..885870Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:884862..884897TCONS_00056945-exon-scaffold_284-1491911889:884862..884897Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:884556..884615TCONS_00056945-exon-scaffold_284-1491911889:884556..884615Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:884277..884390TCONS_00056945-exon-scaffold_284-1491911889:884277..884390Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:884126..884174TCONS_00056945-exon-scaffold_284-1491911889:884126..884174Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:881927..881984TCONS_00056945-exon-scaffold_284-1491911889:881927..881984Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:881357..881494TCONS_00056945-exon-scaffold_284-1491911889:881357..881494Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:881040..881120TCONS_00056945-exon-scaffold_284-1491911889:881040..881120Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:880659..880832TCONS_00056945-exon-scaffold_284-1491911889:880659..880832Clytia hemisphaericaexon
TCONS_00056945-exon-scaffold_284-1491911889:879845..880516TCONS_00056945-exon-scaffold_284-1491911889:879845..880516Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:879845..888737 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.0181621	0.0193367	1.00783e-06	0	30.0198	21.5293	20.4983	17.5769	18.1555	11.8511	21.7392	25.5017	16.0491	14.9099	6.9789	11.1614	9.57651	6.70505	9.34794	7.21712	9.29486	10.7427	0.0103835	4.92082	9.98642	16.5303	1.9008	0.00427931	1.2656e-05	1.94548
Blast
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BLAST of TCONS_00056945 vs. Swiss-Prot (Human)
Match: MSI1H (RNA-binding protein Musashi homolog 1 OS=Homo sapiens GN=MSI1 PE=1 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.673e-22
Identity = 56/157 (35.67%), Postives = 80/157 (50.96%), Query Frame = 1 
Query:  268 KPYIRNPNEEH--CKIFVGGVGKLTNDESLRAYFGKFGEIADSVIMKDKHTNEPRGFAFVTFKTPEAVSAVIEQNNKGGHTLDGKMFIEVRKFQRKSEYDPDKXXXXXXXXXXXXXXXFQYKGPMKCSPEMKVFVGGIGIGTTEDDVKKYFEQFGKV 732
            +P + +P+  H  CK+F+GG+   T  E LR YFG+FGE+ + ++M+D  T   RGF FVTF     V  V+ Q+    H LD K       F R+++                         P   +   K+FVGG+ + TT +DVK+YFEQFGKV
Sbjct:    7 QPGLASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR---HELDSKTIDPKVAFPRRAQ-------------------------PKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKV 135
The following BLAST results are available for this feature:
BLAST of TCONS_00056945 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MSI1H3.673e-2235.67RNA-binding protein Musashi homolog 1 OS=Homo sapi... [more]
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