TCONS_00056910 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056910
Unique NameTCONS_00056910
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length142

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056910 ID=TCONS_00056910|Name=TCONS_00056910|organism=Clytia hemisphaerica|type=transcript|length=142bp
CGCCCattcaaactaaaattttaAACTTCATCAAAAGTAAAGCTTACGAG
GTTAAGCCAGGGTTTCAATACTCTACGCGAATCATGATTGCGACGTTTAT
TGGGATCTTAGCTGTTTATTTGGTAAGTAAAGGTGTCTAACG
Run BLAST on NCBI

transcript from alignment at scaffold_284:48685..49121-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056910 ID=TCONS_00056910|Name=TCONS_00056910|organism=Clytia hemisphaerica|type=transcript|length=437bp|location=Sequence derived from alignment at scaffold_284:48685..49121- (Clytia hemisphaerica)
CGCCCATTCAAACTAAAATTTTAAACTTCATCAAAAGTAAAGCTTACGAG
GTTAAGCCAGGTTTGTTGAACAAGAATTTCTTACTACCTTTTTTCCCCTG
CAAAACCCGGTGTACAAACTGGTGTACTTTGAGATAACCTAATATTTTAT
CAAACATAACTAATATAGAAAAGACCATAATTGAATTATATTGTACAGTG
GAGTCCTCATAACTCGAACACTCACGGGGAACACAAATTTGTTCGAGTTA
AGGAGACTTTGGAGTTAGATTTTCGAGTTAAAAAGACTCTACATAGTAAT
CAATATTGCATGGAAAGTCTGTGATTTTTAACAATTCTATTTCTTATGAT
TCCAGGGTTTCAATACTCTACGCGAATCATGATTGCGACGTTTATTGGGA
TCTTAGCTGTTTATTTGGTAAGTAAAGGTGTCTAACG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035852XLOC_035852Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056910-exon-scaffold_284-1575043694:49062..49121TCONS_00056910-exon-scaffold_284-1575043694:49062..49121Clytia hemisphaericaexon
TCONS_00056910-exon-scaffold_284-1575043694:48685..48766TCONS_00056910-exon-scaffold_284-1575043694:48685..48766Clytia hemisphaericaexon
TCONS_00056910-exon-scaffold_284-1510915933:49062..49121TCONS_00056910-exon-scaffold_284-1510915933:49062..49121Clytia hemisphaericaexon
TCONS_00056910-exon-scaffold_284-1510915933:48685..48766TCONS_00056910-exon-scaffold_284-1510915933:48685..48766Clytia hemisphaericaexon
TCONS_00056910-exon-scaffold_284-1491911889:49062..49121TCONS_00056910-exon-scaffold_284-1491911889:49062..49121Clytia hemisphaericaexon
TCONS_00056910-exon-scaffold_284-1491911889:48685..48766TCONS_00056910-exon-scaffold_284-1491911889:48685..48766Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:48685..49121 -
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056910 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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