TCONS_00056896 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056896
Unique NameTCONS_00056896
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1692

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056896 ID=TCONS_00056896|Name=TCONS_00056896|organism=Clytia hemisphaerica|type=transcript|length=1692bp
ttttagaaaTATTAACTACTTCAAACAGAataattaaaacaaaataataa
gatATAAAAAACTGTTGGACTTGCATCAATTTACTGAAAGGATTCCCTAT
TTTTCATATTACCAAACTTGAACGCGTCGACGAAATGAAGACCAAAAGAA
GAAGTAGTGTAGCGTATAATTTTGAAGCGCAATCATCGCCAGCAACTGCT
AAGAAATCCAAAACAAATGGTGGTGATGAAGAGATGTTCGTCAAACCATG
GAAAGGTAGCGACGGTGTATTGATTGTCGAAGATAGAGAAATTCATGTGC
ACACAAATATACTGTCAatctcatcaaaatattttgacagTATGTTCAAT
GGCAATTTCATAGAGGGGAAAAGCAAGCGTGTTGAATTAACCGGAAAAGA
TTATGAACTTGTTGAGCATATGCTGAGGTTGATTTATCCTCTAGAAGCAA
GTTTAACTCCAAACTCTTTCTTGGTTTGTGGATCATGTAAAGATGCTCCA
CCCAAAAAGCGTGCGCTGTCGTCCAACATTGAAGAGTACAAGCGAAATCC
AAACCCATCAAACAGTGAGATTTGTTTAAAGTGTGGCGATAGGTTTATGA
AGATGGATGAAGACCGACGGTTAATTTTAGACCATATCAAGAAGTTGTGG
GAAGTTTCGcaagaatttattattgatattttgagcaaaaaaattaagTC
AGAAATTGGCCAACAAAGCCAAACTATTCAAACTTCAGCTCACGCATTTG
ATTTACTTGAAATCGCAGATGTTATCAGTTCAAAGTCAGTTAAGAATGCT
TGTTTCAATTATCTACCCTCCATCTTAACCTCTCTATCAAAGCTGAGAAA
TGGTTTATCGGGACGAAAAATTGGTCTGGAATCGCGACTCCGTTTGAAGG
GCATACTATACAGAAACTTATTTAAACGTTTGAAACCAAAAGATCGGCTG
GATGAAGACGTCACCAAAGACTTTAACAATCTGACAGACGAGTTGGTTGT
TTTTGATTTAGCGGAAGAGATAGCTGATCCAACCAGCGATGATGAGTATG
GAAGCTCttgtgaaagtgaaagtaatgcCTCCAGCGAGCATTAATCTTAA
AGCACTTCAACGTCGAACTGAtttgctattcatgatatgcaccactgcaa
tgacttcacaaaattatgcaacttttctgtttttgttccacccaatacgc
cacttcttctattgtttaagtgacgtattgggtggaaaattttataaGTT
CTCAGAAggctctccagtggtgcataacATGAATGGAAGGAGCTTTAAGA
CCTCATTTATTTCTACGCGGCTCAAAGAATTTAATTTCGAACGAATTTTT
ACGACTTATATATTTTGAATACTGTGATGACTGGGATATAGTTTTCACCA
ATGTTTCAGTGATAAAGCTTGGAATCAATTAGTGCAAGAGTGAAAAATAA
CAATGACAATGAGTTTTACCgataggtttttttttatttactggTATCga
aacattttatattttatagattttcatttttttcccttCGACCACTTTTT
AGGTATACATTTCTATATACATATGATATGctttttatttggtttttaga
ttttattttgtgATTAGTATATCGACATTTTTATTCGTGTAAATAAATTC
CTTACGCTTGTTTCTTTACTATGTGCATTTTACcattatcaa
Run BLAST on NCBI

protein sequence of TCONS_00056896-protein

>TCONS_00056896-protein ID=TCONS_00056896-protein|Name=TCONS_00056896-protein|organism=Clytia hemisphaerica|type=polypeptide|length=319bp
MKTKRRSSVAYNFEAQSSPATAKKSKTNGGDEEMFVKPWKGSDGVLIVED
REIHVHTNILSISSKYFDSMFNGNFIEGKSKRVELTGKDYELVEHMLRLI
YPLEASLTPNSFLVCGSCKDAPPKKRALSSNIEEYKRNPNPSNSEICLKC
GDRFMKMDEDRRLILDHIKKLWEVSQEFIIDILSKKIKSEIGQQSQTIQT
SAHAFDLLEIADVISSKSVKNACFNYLPSILTSLSKLRNGLSGRKIGLES
RLRLKGILYRNLFKRLKPKDRLDEDVTKDFNNLTDELVVFDLAEEIADPT
SDDEYGSSCESESNASSEH
Run BLAST on NCBI

transcript from alignment at scaffold_284:1171917..1176699+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056896 ID=TCONS_00056896|Name=TCONS_00056896|organism=Clytia hemisphaerica|type=transcript|length=4783bp|location=Sequence derived from alignment at scaffold_284:1171917..1176699+ (Clytia hemisphaerica)
ttttagaaaTATTAACTACTTCAAACAGAataattaaaacaaaataataa gatATAAAAAACTGTTGGACTTGCATCAATTTACTGAAAGGATTCCCTAT TTTTCATATTACCAAACTTGAACGGTGAGTAGCTTCTtattcgtcgaaaa aagattataaatgaagtctctttaactcgaacctctataactcgaatgtc tccttaactggaACAAATTTTTATGTCCCTTCAGTTAATATTGCCTTACG TACCTCACTCCATACAACTCGAAAATTTCTGTACTTCTATTCTTCTTACA GCGTCGACGAAATGAAGACCAAAAGAAGAAGTAGTGTAGCGTATAATTTT GAAGCGCAATCATCGCCAGCAACTGCTAAGAAATCCAAAACAAATGGTGG TGATGAAGAGATGTTCGTCAAACCATGGAAAGGTAGCGACGGTGTATTGA TTGTCGAAGATAGAGAAATTCATGTGCACACAAATATACTGTCAatctca tcaaaatattttgacagTATGTTCAATGGCAATTTCATAGAGGGGAAAAG CAAGCGTGTTGAATTAACCGGAAAAGATTATGAACTTGTTGAGCATATGC TGAGGTTGATTTATCCTCTAGAAGCAAGTTTAAGTAAGTAACCTTTGAAT TTCTTAATTAGAATTCTCTCCTGAATGTGATAGTACCATTGAATTTAAAG TTCGAAGAATCTTCAGCCTTTCGCAAGCAAAAAGAATGCGAAGCCTTTAA ATTTCTACTGTCTTTTAATCTAGCGCTTTACTTGTTTTCTCACGTACGAA AACCACGTGGTTCACGCGTTtcggatgggaaataagtggcatCATTTTCC ATCTTAAGAATGATGTAAAGTGTTAATGTTTGAAATCTGATGGAGCccca ttttcgaaaaaataattttttggccaaatttgagccaaaaagtgactaaa aatggtgttttttggactttgagtGAAATTAAAatacaatacacgttttt ttttttttaagaaacacacttttaagaaacatgaggctcagaatgtctaa aaactaagaaacatctaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtgagaatgagaaaataa cattttttaatttggtttttttaagaaccttccaatccagcctttcataa ggctgattatgtcaaaaagtttagaaacatgtacagtaagaaacatttaa ggctcaaaaggccgatttcttaagaaaaattgAGGCTGCTtgttaaaact agtttcttaaaaaaaaaaaaaacgtgtagttttttttctgattttttcgc ATAAGTCAGAGAgcaagttttcattttttagccATTGTAGCCATTTTTCT ATCTTCTTATTACATTAGGTCAAGTAGGTCCATTCAGATATTTGCTgcca tttttctatttttttattgcattagccttcaggtaggtccatgcGACATG CAGCTTGTTTCTCGCAATAttagtgcaaaatttcaacttgTTAATTACTA ATAGttatttgatgtttttgatacTATTGatgttttggtgaattttggaT ATTTATTATTATTCTGGTCAATAAAATATACTTATgtccaaaaaaaaagg aaactaCTAATTTCGATTTCCAAATGTATGTACTCTCCAAAAATGTACTT TGGCTttaactaaaaaaatcgagtgattaaaaaaaaaagcccTTCATTAT AGTGACCGATAAAATATGTGATATCGAATTTAATTATAACCTTTTTTCTT TTAGCTCCAAACTCTTTCTTGGTTTGTGGATCATGTAAAGATGCTCCACC CAAAAAGCGTGCGCTGTCGTCCAGTAAGTACACTTCTCTTCTCCCATTTT TAAtgctaaataaaataaatacaacTTTTAGAGGAAAAATTATCATGAAA TAGTGCTGATGTGCAGTagtttatctgatattccgttGGTGGATTGGcag ccgcccacgctaaagctccaaaggagcgggccaatttcccatcggagagg catttgatgtgccgcatcccaaGTCGGGTTCAACTTCCCTTGTGTATgaa ggtaaaaatatttcgctTGGACCTGCCAATCCCCGAAAtagagggctggg ttaccagacctccctctgcaaaatccttgacgcggtcttgcaaaattccg taatctaaaccttccagatgttgaaatttCTCCGACCTTCAGATCTTTAg catgtcggatgaaaatttctgcatctgggtgccaTATAATACAGTACAGA CAGTTTACTAAACGAaccatattttttctttttgtgtaatattttccgag cctttagacCATGTACACACGCTATAACAACAATTCCTGTTCTCTTGGTT AGAAGTGgcgtaaaaaatgaatttatcaATAGAATGGAAATgttagtttt tattttaatggAGTGAAGATcccataatcagcataaaatttccgtttcAA TGATATATTAGGCTGCTCGCATCCACTAACGAATCCGTGCTTCTTTTATA CTACcagcggttttgtagaggtctgcgattcagactggGGATATTATGTG CTAATTTACCCGTGTAAAATTCATTTTCCGTAGACTtctgtttttttatt tcgtttCTATTAACTTTAGACATTGAAGAGTACAAGCGAAATCCAAACCC ATCAAACAGTGAGATTTGTTTAAAGTGTGGCGATAGGTTTATGAAGATGG GTAAGAGTGTGTTTCATTCGGTAACGAAAGCTTCTCTAAGTGCAAATGTG AATTAAAGGTACAATTTAGAGGAAAAAGCTTTCATGCATTTCGGGcatat ttgtaaatattttattcCGCAAATTTACCGGTTTCTGGTCATTCAGCTGA CACACAAccttgttttaacgttcaaataacgttatatggacgatGTGAAC ATCAGATTGACGTCGAAACAACGTACCTCTTCCCGCAAAAATGCCTTATA AGTCTCGTGAAACACAATATAATGTTTACATACTTTTCCAAATAATCGGG GGGATCGAATAAACGGGgtgttgaaaaattttaaaaattttaataaacgg ggggacctaattgccggggggggggtNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNcgtttatttggaacctaggAGTACATTGATACT CTCTTATCCCCTGTTtcaatctttgtttattttctgcTCTATTTCAGATG AAGACCGACGGTTAATTTTAGACCATATCAAGAAGTTGTGGGAAGTTTCG caagaatttattattgatattttgagcaaaaaaattaagTCAGAAATTGG CCAACAAAGCCAAACTATTCAAACTTCAGCTCACGCATTTGATTTACTTG AAATCGCAGATGTTATCAGTTCAAAGTCAGTTAAGAATGCTTGTTTCAAT TATCTACCCTCCATCTTAACCTCTCTATCAAAGCTGAGAAATGGTTTATC GGGACGAAAAATTGGTCTGGAATCGCGACTCCGTTTGAAGGGCATACTAT ACAGAAACTTATTTAAACGTTTGAAACCAAAAGATCGGCTGGATGAAGAC GTCACCAAAGACTTTAACAATCTGACAGACGAGTTGGTTGTTTTTGATTT AGCGGAAGAGATAGCTGATCCAACCAGCGATGATGAGTATGGAAGCTCtt gtgaaagtgaaagtaatgcCTCCAGCGAGCATTAATCTTAAAGCACTTCA ACGTCGAACTGAtttgctattcatgatatgcaccactgcaatgacttcac aaaattatgcaacttttctgtttttgttccacccaatacgccacttcttc tattgtttaagtgacgtattgggtggaaaattttataaGTTCTCAGAAgg ctctccagtggtgcataacATGAATGGAAGGAGCTTTAAGACCTCATTTA TTTCTACGCGGCTCAAAGAATTTAATTTCGAACGAATTTTTACGACTTAT ATATTTTGAATACTGTGATGACTGGGATATAGTTTTCACCAATGTTTCAG TGATAAAGCTTGGAATCAATTAGTGCAAGAGTGAAAAATAACAATGACAA TGAGTTTTACCgataggtttttttttatttactggTATCgaaacatttta tattttatagattttcatttttttcccttCGACCACTTTTTAGGTATACA TTTCTATATACATATGATATGctttttatttggtttttagattttatttt gtgATTAGTATATCGACATTTTTATTCGTGTAAATAAATTCCTTACGCTT GTTTCTTTACTATGTGCATTTTACcattatcaa

Coding sequence (CDS) from alignment at scaffold_284:1171917..1176699+

>TCONS_00056896 ID=TCONS_00056896|Name=TCONS_00056896|organism=Clytia hemisphaerica|type=CDS|length=3840bp|location=Sequence derived from alignment at scaffold_284:1171917..1176699+ (Clytia hemisphaerica)
ATGAAGACCAAAAGAAGAAGTAGTGTAGCGTATAATTTTGAAGCGCAATC
ATCGCCAGCAACTGCTAAGAAATCCAAAACAAATGGTGGTGATGAAGAGA
TGTTCGTCAAACCATGGAAAGGTAGCGACGGTGTATTGATTGTCGAAGAT
AGAGAAATTCATGTGCACACAAATATACTGTCAatctcatcaaaatattt
tgacagTATGTTCAATGGCAATTTCATAGAGGGGAAAAGCAAGCGTGTTG
AATTAACCGGAAAAGATTATGAACTTGTTGAGCATATGCTGAGGTTGATT
TATCCTCTAGAAGCAAGTTTAACTCCAAACTCTTTCTTGGTTTGTGGATC
ATGTAAAGATGCTCCACCCAAAAAGCGTGCGCTGTCGTCCAACATTGAAG
AGTACAAGCGAAATCCAAACCCATCAAACAGTGAGATTTGTTTAAAGTGT
GGCGATAGGTTTATGAAGATGGATGAAGACCGACGGTTAATTTTAGACCA
TATCAAGAAGTTGTGGGAAGTTTCGcaagaatttattattgatattttga
gcaaaaaaattaagTCAGAAATTGGCCAACAAAGCCAAACTATTCAAACT
TCAGCTCACGCATTTGATTTACTTGAAATCGCAGATGTTATCAGTTCAAA
GTCAGTTAAGAATGCTTGTTTCAATTATCTACCCTCCATCTTAACCTCTC
TATCAAAGCTGAGAAATGGTTTATCGGGACGAAAAATTGGTCTGGAATCG
CGACTCCGTTTGAAGGGCATACTATACAGAAACTTATTTAAACGTTTGAA
ACCAAAAGATCGGCTGGATGAAGACGTCACCAAAGACTTTAACAATCTGA
CAGACGAGTTGGTTGTTTTTGATTTAGCGGAAGAGATAGCTGATCCAACC
AGCGATGATGAGTATGGAAGCTCttgtgaaagtgaaagtaatgcCTCCAG
CGAGCATTAAATGAAGACCAAAAGAAGAAGTAGTGTAGCGTATAATTTTG
AAGCGCAATCATCGCCAGCAACTGCTAAGAAATCCAAAACAAATGGTGGT
GATGAAGAGATGTTCGTCAAACCATGGAAAGGTAGCGACGGTGTATTGAT
TGTCGAAGATAGAGAAATTCATGTGCACACAAATATACTGTCAatctcat
caaaatattttgacagTATGTTCAATGGCAATTTCATAGAGGGGAAAAGC
AAGCGTGTTGAATTAACCGGAAAAGATTATGAACTTGTTGAGCATATGCT
GAGGTTGATTTATCCTCTAGAAGCAAGTTTAACTCCAAACTCTTTCTTGG
TTTGTGGATCATGTAAAGATGCTCCACCCAAAAAGCGTGCGCTGTCGTCC
AACATTGAAGAGTACAAGCGAAATCCAAACCCATCAAACAGTGAGATTTG
TTTAAAGTGTGGCGATAGGTTTATGAAGATGGATGAAGACCGACGGTTAA
TTTTAGACCATATCAAGAAGTTGTGGGAAGTTTCGcaagaatttattatt
gatattttgagcaaaaaaattaagTCAGAAATTGGCCAACAAAGCCAAAC
TATTCAAACTTCAGCTCACGCATTTGATTTACTTGAAATCGCAGATGTTA
TCAGTTCAAAGTCAGTTAAGAATGCTTGTTTCAATTATCTACCCTCCATC
TTAACCTCTCTATCAAAGCTGAGAAATGGTTTATCGGGACGAAAAATTGG
TCTGGAATCGCGACTCCGTTTGAAGGGCATACTATACAGAAACTTATTTA
AACGTTTGAAACCAAAAGATCGGCTGGATGAAGACGTCACCAAAGACTTT
AACAATCTGACAGACGAGTTGGTTGTTTTTGATTTAGCGGAAGAGATAGC
TGATCCAACCAGCGATGATGAGTATGGAAGCTCttgtgaaagtgaaagta
atgcCTCCAGCGAGCATTAAATGAAGACCAAAAGAAGAAGTAGTGTAGCG
TATAATTTTGAAGCGCAATCATCGCCAGCAACTGCTAAGAAATCCAAAAC
AAATGGTGGTGATGAAGAGATGTTCGTCAAACCATGGAAAGGTAGCGACG
GTGTATTGATTGTCGAAGATAGAGAAATTCATGTGCACACAAATATACTG
TCAatctcatcaaaatattttgacagTATGTTCAATGGCAATTTCATAGA
GGGGAAAAGCAAGCGTGTTGAATTAACCGGAAAAGATTATGAACTTGTTG
AGCATATGCTGAGGTTGATTTATCCTCTAGAAGCAAGTTTAACTCCAAAC
TCTTTCTTGGTTTGTGGATCATGTAAAGATGCTCCACCCAAAAAGCGTGC
GCTGTCGTCCAACATTGAAGAGTACAAGCGAAATCCAAACCCATCAAACA
GTGAGATTTGTTTAAAGTGTGGCGATAGGTTTATGAAGATGGATGAAGAC
CGACGGTTAATTTTAGACCATATCAAGAAGTTGTGGGAAGTTTCGcaaga
atttattattgatattttgagcaaaaaaattaagTCAGAAATTGGCCAAC
AAAGCCAAACTATTCAAACTTCAGCTCACGCATTTGATTTACTTGAAATC
GCAGATGTTATCAGTTCAAAGTCAGTTAAGAATGCTTGTTTCAATTATCT
ACCCTCCATCTTAACCTCTCTATCAAAGCTGAGAAATGGTTTATCGGGAC
GAAAAATTGGTCTGGAATCGCGACTCCGTTTGAAGGGCATACTATACAGA
AACTTATTTAAACGTTTGAAACCAAAAGATCGGCTGGATGAAGACGTCAC
CAAAGACTTTAACAATCTGACAGACGAGTTGGTTGTTTTTGATTTAGCGG
AAGAGATAGCTGATCCAACCAGCGATGATGAGTATGGAAGCTCttgtgaa
agtgaaagtaatgcCTCCAGCGAGCATTAAATGAAGACCAAAAGAAGAAG
TAGTGTAGCGTATAATTTTGAAGCGCAATCATCGCCAGCAACTGCTAAGA
AATCCAAAACAAATGGTGGTGATGAAGAGATGTTCGTCAAACCATGGAAA
GGTAGCGACGGTGTATTGATTGTCGAAGATAGAGAAATTCATGTGCACAC
AAATATACTGTCAatctcatcaaaatattttgacagTATGTTCAATGGCA
ATTTCATAGAGGGGAAAAGCAAGCGTGTTGAATTAACCGGAAAAGATTAT
GAACTTGTTGAGCATATGCTGAGGTTGATTTATCCTCTAGAAGCAAGTTT
AACTCCAAACTCTTTCTTGGTTTGTGGATCATGTAAAGATGCTCCACCCA
AAAAGCGTGCGCTGTCGTCCAACATTGAAGAGTACAAGCGAAATCCAAAC
CCATCAAACAGTGAGATTTGTTTAAAGTGTGGCGATAGGTTTATGAAGAT
GGATGAAGACCGACGGTTAATTTTAGACCATATCAAGAAGTTGTGGGAAG
TTTCGcaagaatttattattgatattttgagcaaaaaaattaagTCAGAA
ATTGGCCAACAAAGCCAAACTATTCAAACTTCAGCTCACGCATTTGATTT
ACTTGAAATCGCAGATGTTATCAGTTCAAAGTCAGTTAAGAATGCTTGTT
TCAATTATCTACCCTCCATCTTAACCTCTCTATCAAAGCTGAGAAATGGT
TTATCGGGACGAAAAATTGGTCTGGAATCGCGACTCCGTTTGAAGGGCAT
ACTATACAGAAACTTATTTAAACGTTTGAAACCAAAAGATCGGCTGGATG
AAGACGTCACCAAAGACTTTAACAATCTGACAGACGAGTTGGTTGTTTTT
GATTTAGCGGAAGAGATAGCTGATCCAACCAGCGATGATGAGTATGGAAG
CTCttgtgaaagtgaaagtaatgcCTCCAGCGAGCATTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035842XLOC_035842Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056896-exon-scaffold_284-1491911889:1171917..1172040TCONS_00056896-exon-scaffold_284-1491911889:1171917..1172040Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1510915933:1171917..1172040TCONS_00056896-exon-scaffold_284-1510915933:1171917..1172040Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1575043694:1171917..1172040TCONS_00056896-exon-scaffold_284-1575043694:1171917..1172040Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1491911889:1172218..1172549TCONS_00056896-exon-scaffold_284-1491911889:1172218..1172549Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1510915933:1172218..1172549TCONS_00056896-exon-scaffold_284-1510915933:1172218..1172549Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1575043694:1172218..1172549TCONS_00056896-exon-scaffold_284-1575043694:1172218..1172549Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1491911889:1174171..1174239TCONS_00056896-exon-scaffold_284-1491911889:1174171..1174239Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1510915933:1174171..1174239TCONS_00056896-exon-scaffold_284-1510915933:1174171..1174239Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1575043694:1174171..1174239TCONS_00056896-exon-scaffold_284-1575043694:1174171..1174239Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1491911889:1175036..1175116TCONS_00056896-exon-scaffold_284-1491911889:1175036..1175116Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1510915933:1175036..1175116TCONS_00056896-exon-scaffold_284-1510915933:1175036..1175116Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1575043694:1175036..1175116TCONS_00056896-exon-scaffold_284-1575043694:1175036..1175116Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1491911889:1175614..1176699TCONS_00056896-exon-scaffold_284-1491911889:1175614..1176699Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1510915933:1175614..1176699TCONS_00056896-exon-scaffold_284-1510915933:1175614..1176699Clytia hemisphaericaexon
TCONS_00056896-exon-scaffold_284-1575043694:1175614..1176699TCONS_00056896-exon-scaffold_284-1575043694:1175614..1176699Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056896-proteinTCONS_00056896-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_284supercontigscaffold_284:1171917..1176699 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.04925 9.01637 18.9533 21.3884 92.4204 65.1818 16.3694 19.0708 9.90381 9.73857 5.81658 7.25095 5.82811 5.69724 7.28477 8.7408 7.97474 8.40099 1.50207 2.74363 6.45983 6.99303 13.4983 12.6909 9.8402 13.6664 4.04441 4.46611 8.99123 10.6597
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR000210BTB/POZ_dom
IPR011333SKP1/BTB/POZ
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056896 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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