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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056836 ID=TCONS_00056836|Name=TCONS_00056836|organism=Clytia hemisphaerica|type=transcript|length=1101bp
ctcaCATTCATAACTTTTCACACacgacaaaaatttttttgcaaggaTTG
CCTTGGGATATGTAACTCTTGCTCTCTTTAAAGCATGCAGGCAAGCTTCT
AAAGAATACAGatcttgttttttcttctttcttcttttgctGCAATCTTC
CTCTTCTAAAGGTTAGATGGTATAAGTTCACCATTTCGTCACCGTtactc
tttttttcattttttattatatGGTTTCAGCACTGTGTCTTATTACGGTG
GCAGTATTCTTCACTTCTGTTTTGTCAGGTTCTTAAAAGGTCTTTCTTAA
CAAAAAATTTCTCGAATACCAAAATCTTGTGTTGAAGATAGAACCAATAT
TGATAAGTAGAGTCAATTTGTAGCTCGTACCATTAAGGTCATGCACAATG
CGGTACGTATAGTATTCGTATAGGGTCAGGTTTGcgttcaaaatggtaga
ctcttCCAGCACAGCTTATATTAAGTAATTTTCTGAACTACAGTCTAGCT
AAAAGAATTGAAACGGGGAAAGTCGACTTCAAAAGGCAGATGGTTGAAAC
GGAAAAAAAGGGaggagaaaataaaatttcaaaattctcctCCCGTCTTC
ACAATTAATTATTTCGTTTTTCCTTCATCTAGTAATTAATTCATTTTAAG
TCTTATTTTAACTTACCGTCCTTCTTTCGGCTCAAACTATCAAACACTTT
GCTTCTCCTCACTGGTCACTTTGATGTTACTTAATGGTGACGAGTAACCA
GAATAGATTCAATTTGTACTTGAACTTGAAAATTCCCTTCTAAAAATCTC
GATGATTTCAGAGATCTATAGGAAGGCGACCTTTTatagttttgaatttt
cttctcCCTTTTAATTCATCAATGAACTTTGATGAACTCGTGTTGTGGGA
TTTATTGAAATCATGGCCTGATTTTTATAGTATAAAGTAGCGATCCTAGA
GTGTCAATACTGTGTTAATTAGGAGCATTCTTAAGCCTTATAACATCTAC
TCCTGCTATCATTTTGTATTATAATGTAGAATTATTTTAAATATCAAAAC
GGAAAGATTGTAGATATATAGaatattgtatatttttgggtaaattttga
C Run BLAST on NCBI transcript from alignment at scaffold_283:128499..129599 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056836 ID=TCONS_00056836|Name=TCONS_00056836|organism=Clytia hemisphaerica|type=transcript|length=1101bp|location=Sequence derived from alignment at scaffold_283:128499..129599 (Clytia hemisphaerica)
GtcaaaatttacccaaaaatatacaatattCTATATATCTACAATCTTTC
CGTTTTGATATTTAAAATAATTCTACATTATAATACAAAATGATAGCAGG
AGTAGATGTTATAAGGCTTAAGAATGCTCCTAATTAACACAGTATTGACA
CTCTAGGATCGCTACTTTATACTATAAAAATCAGGCCATGATTTCAATAA
ATCCCACAACACGAGTTCATCAAAGTTCATTGATGAATTAAAAGGgagaa
gaaaattcaaaactatAAAAGGTCGCCTTCCTATAGATCTCTGAAATCAT
CGAGATTTTTAGAAGGGAATTTTCAAGTTCAAGTACAAATTGAATCTATT
CTGGTTACTCGTCACCATTAAGTAACATCAAAGTGACCAGTGAGGAGAAG
CAAAGTGTTTGATAGTTTGAGCCGAAAGAAGGACGGTAAGTTAAAATAAG
ACTTAAAATGAATTAATTACTAGATGAAGGAAAAACGAAATAATTAATTG
TGAAGACGGGaggagaattttgaaattttattttctcctCCCTTTTTTTC
CGTTTCAACCATCTGCCTTTTGAAGTCGACTTTCCCCGTTTCAATTCTTT
TAGCTAGACTGTAGTTCAGAAAATTACTTAATATAAGCTGTGCTGGaaga
gtctaccattttgaacgCAAACCTGACCCTATACGAATACTATACGTACC
GCATTGTGCATGACCTTAATGGTACGAGCTACAAATTGACTCTACTTATC
AATATTGGTTCTATCTTCAACACAAGATTTTGGTATTCGAGAAATTTTTT
GTTAAGAAAGACCTTTTAAGAACCTGACAAAACAGAAGTGAAGAATACTG
CCACCGTAATAAGACACAGTGCTGAAACCatataataaaaaatgaaaaaa
agagtaACGGTGACGAAATGGTGAACTTATACCATCTAACCTTTAGAAGA
GGAAGATTGCagcaaaagaagaaagaagaaaaaacaagatCTGTATTCTT
TAGAAGCTTGCCTGCATGCTTTAAAGAGAGCAAGAGTTACATATCCCAAG
GCAAtccttgcaaaaaaatttttgtcgtGTGTGAAAAGTTATGAATGtga
g
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056836-exon-scaffold_283-1491911889:128499..129599 | TCONS_00056836-exon-scaffold_283-1491911889:128499..129599 | Clytia hemisphaerica | exon |
| TCONS_00056836-exon-scaffold_283-1510915933:128499..129599 | TCONS_00056836-exon-scaffold_283-1510915933:128499..129599 | Clytia hemisphaerica | exon |
| TCONS_00056836-exon-scaffold_283-1575043694:128499..129599 | TCONS_00056836-exon-scaffold_283-1575043694:128499..129599 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_283 | supercontig | scaffold_283:128499..129599 . |
Blast
The following BLAST results are available for this feature:
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