TCONS_00056828 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056828
Unique NameTCONS_00056828
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2708

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056828 ID=TCONS_00056828|Name=TCONS_00056828|organism=Clytia hemisphaerica|type=transcript|length=2708bp
gtttcagtaaaataaaaatgaatacaAAAAGAATACTATTATTGGTTATA
CTCAGTGCAACTTTTTTACAATGTAGAAAACTTAAAAAGGTTGTTACAAA
GAAatcagaaactttcaatgatgaGACAAACAactttattttacaaaaga
GACTTCACAAACTGAAAGAATATTCACAGAAAGCTACAAAGCGATTAGCA
GCCCTTTCAGATTATTCCAATTTCTATAATAAATATTTGACGGAAATTTT
GCGGAGCAGAGTTCCTGGAACCGTTGGCCATGCCCGTGTGAAAAATTTTA
TCATACGAAAGTTGCAAGAATATAATTGGGATGTCAAGACGCAGAACTTC
ACCATGTGGACACCTCTTGGACCCAAAAACTTCACTAATATTATTGGCAC
GCTTAATCCAAGAGCTGATAGGGTGCTAGCGTTAGCGGCTCACTACGATT
CGAAAATCTTACCGGTTGTTAACGGCAAGTTTTTCACGGCAGCTACCGAT
TCGGCCGTTCCATGTGCTATGCTGTTGGATTTTGCAAGAGATTTGAGCGA
CAAAGCAAAAGAAATtacgtcgACATTGGAACAAGTATCGCCACAACTTT
TATTCCTTGATGGGGAAGAAGCATTTGTTGAATGGACCAAGACAGATTCA
ATCTATGGATCCAGATACATGGCTGCTTCAATGTCCAATGCTTCCCATTG
GAATCCGAAATTAGCTTTACACGAAATCAGTCAGTTAGATTCTATGgATG
CTTTTGTGCTTCTCGATTTGCTTGGTGCAAAAGATCCGACCTTTTATAAT
TGGTTTCCAACCACGAGTCGATTGTATGAAAGTTTGAAGAAGATAGAGAA
GAACCTTCGAGCAGAGGGCCAGTTATTTGGTGTGAATCACAAANaatttc
atttcatttttttttattttttgttgaaggATGCTTTTGTGCTTCTCGAT
TTGCTTGGTGCAAAAGATCCGACCTTTTATAATTGGTTTCCAACCACGAG
TCGATTGTATGAAAGTTTGAAGAAGATAGAGAAGAACCTTCGAGCAGAGG
GCCAGTTATTTGGTGTGAATCACAAACATTACTCTGGTCACTACTTCACT
GGCCAACGGCCTGAAGATATCGGAATCTATGGCAAGATTGATGATGACCA
TGTCCCGTTTATGCAAAAAGGTGTTCCCATCCTACACATCATCCCCTACC
CGTTCCCCTCCACGTGGCACACACTCAATGATGATGAAGAACATCTCGAT
CCAACCACCATTGAAGATCTTCTCAAAATATTTCGCCATTTCATTTTCTC
CTATTTCTCACTTGAATGAATGGAttgaacgaatgaatgaatatAAACTC
ACCTGGCACGCGATGTTGTTTTGGTGTTCGTCTAACGTCCACGCCCATCT
ACATAACGTAATATAAATGTTCGATGAACGTACTGTTCAAAAGTTGTGTT
GGTTTCTTCCTTTTCCCCGAGACTCCACTGTCAAAGGTTTTGTTTCCATC
ATAAGCAACTAGCCCCAAACACCACCAACAGTCAATCATTATAAGTGCTT
GTGGGCTAAACTCTGTAAGTTTTTCATATGacaatctttcatttttaaat
aatGTAAATTCCTAAAAGAAACAATTATAATTTATTAGCACTTAAAAAAT
GATATCTAAGATATTTATTCAATGTAACTGTGATAAATGACTCGGTTTTT
AACATGAAATCAAGTCGATTTTTAATGTGccggttgttttttttattaca
atttCGTTTTCTGGGCTGCACATATGCCTCTaaaatttagagatttttta
TACTCTTTTGTTTAACATATAAAAGAAATAGTGTTAGACTAAAATACTTA
CCTAAAAGCTGTTTGTCTGTCTGACAGTAAGACAAAGAAGATGtttcaat
ttaaaagaaatttgatttgatATAACTTGGAGAAAGGTATCCCAGAGCTG
ATTTTTACTTATCATTTTCAGAAATaatatgaaattttcttccTCAAATT
TTATTAGTTTCAATGGTTCACTTATGCATGATATTTATGATGACGTAata
ttttatacggaagcacaaAAATATAGCCTGgcactagttttattgtttaa
atcaaaaatcagtGACAAACACACGGTatttttttgggtgtttccctatt
aaacattacgtcatgaatatcacgaatacGGTACTTATGTCTTGCACACT
TTTTTGGATACCATATAAAAAAGAAGTGCATCTAAATTTATTATCAGATA
TTCCGATGGTGGATTGGTGGCCGCCCAAtataaagctctgaaggagcggg
ccattttcccatcggagaggaacgatagtcggcctttgatgtgccgcatc
tcCAGTCAGGTTCAACTTCTTTCGCAcgtaaacctaaaaatattttggtt
ggactCGCCAATCCCCGAatacgagggctgggttaccacaTACCAGGCCT
CCCACTGCAAAATCCTATATGCggacttgcaaaattccgtaatctaaaca
tACCGGATGTTGAAATTTTACCCGACCATCAAAGCTTTAGCGTgccggat
gaaaatttctgcatgtGGTTGCCTGATAACATTAGGTTAATTTTCcgtat
tttgaaattatatgcATTTTAAAGGGATATTCTATTATTAGTGACAAGAA
TAATgatattgttaaaaaaaatataaaatatattctaTAAGTAAATACTC
GAATTGGA
Run BLAST on NCBI

transcript from alignment at scaffold_283:105680..119693-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056828 ID=TCONS_00056828|Name=TCONS_00056828|organism=Clytia hemisphaerica|type=transcript|length=14014bp|location=Sequence derived from alignment at scaffold_283:105680..119693- (Clytia hemisphaerica)
GTTTCAGTAAAATAAAAATGAATACAAAAAGAATACTATTATTGGTTATA
CTCAGTGCAACTTTTTTACAATGTAGAAAACTTAAAAAGGTTGTTACAAA
GAAATCAGAAACTTTCAATGATGAGACAAACAACTTTATTTTACAAAAGG
TAATCTACTTTCTTTTCATTTTTTATGCACGAAAATTTAGCATTAGAGCT
CAAGATCATAAAAAGTTCGATTCGGGGAAAATTATTCCTCTGATTATATA
ACAGATTATATAGCTCATAGTATGAAGTAGATCCTTCTGAAGTAGATCAT
TTTTTAACGACTTAGTAATTTAAGATCTGATAAATAATAAATCAGTAAAG
CATAATTAAACTTTTCAAAAATATATTTAATGATTTATATTATGCTGAAA
TTTTTCCAAAAAGTTAAACCTTAAAGAAAGAGACATTCCAATAATGTTTA
ATTAGTAAATATTTATGATGATTCCGTTTAAAAACTATTAACTGAACTAT
TTTAAATTGAAATATAGTCAGTCTGACTTACATAAAAAATCTCTTGGCAA
CTGTTAACTTCAAAATCTCAAATTAGTATTTGGAATTCTTTGCATGGTGC
CCTCAGTTAAAAAAAGAGTTTAATAGCAAAAAAAACTATTTTAAAATATA
ACAGTAGTTTTTTAATGAATTATTAAATACTTGAACTAACTTGAGTCAAA
AATGACTCCTTACTGAGTTTAAAAGTACGGTCTAGTTGTGTAAAAATTAT
ACACAAAAAGGCGTAAAAGTAAAATGAGACTTTGCACAATTGTAGTTCAG
GGTTAGAAAACGGATTTAAATTTCAGAACCAAAAAATTGGCACCTGTTTG
TGTACTTTACAGACCAGAACAGGTTCCCCGCCTAAAATGATTTTTTTTTC
TCCAAAGTCATGTTACATAATTCAGTTCAGTCCCTCTCTTATTTGTAATA
CTGTGAAATTTTGTCTAAAAATTAATTAAGGTTCAGGGAGGGTTTATCAA
AACACTCGTCTTCCTGAATGTTATCGATTTTTACTGCCGAGAATTGAAAA
AAGGAGGAATATAATAGAGGCCACTATATCGCAAAAAAGCTTCCAGTACG
TGCAGGAGCTTGTGCCAAGGTACTTTATGATTGATTATTGCTCTTCACAT
ATAGAAGATCAAAATTTGAGAGGGAGGCTTTGGGCGATCCCCCGTTGCTA
ATATATTTGTTTTTAAAGAATGGAATCAAAAACCGATACTGAACGGAGAC
GTGCCTTCCCTTGGGTGTTTGTTTTTCAATGATAAATACTGTTTTTCTTT
TTAATTCAGAGACTTCACAAACTGAAAGAATATTCACAGAAAGCTACAAA
GCGATTAGCAGCCCTTTCAGATTATTCCAATTTCTATAATAAATATTTGA
CGGAAATTTTGCGGAGCAGAGTTCCTGGAACCGTTGGCCATGCCCGTGTG
AAAAATGTAAGTCCAATTCTTTTGCTGCAGGCTTCTTTATTAATTTCGAC
CTTCAGTTTAAACCTATTTTCAACTCTCTTGAAAATATGTGATACAAATA
AGATTTACGAATCTTTAAATGAGTATTTAGAAAGAGCTCGTCAATCGCAT
TGAAAGTGTCTCTAGGATTTAGGAAATTTTTACAATATGTGAAGAATGGG
TCTTAATGGGTCCTTATTTAGACGGTTCACTTTCTACCCTTCTTGGCACC
GTTTCTTGTGAGAGACAGAAAAAGATTTGATGGATGTAAAAGCAGACGGA
TCAAATCTCTGAAATACAAAAGTTCGACCGTCTAAACTAGAAATAAAAAC
ACTTCGAGCGAGAAAAGGGACACTGAATGATTTAGATTTCCTCGGTTGTG
ATAATATGTCTATCAGAATGGAATTATATCCATATCGAAATTTGTGTTTT
TCCGTAGTTTCGTTACAAAACTGGAAATAGTATATAAAGATTATAAATAT
CTTTCATTATGATATTCCTACACCTTTTGGTAGGAAAGAAACTGTAACTG
TATGATTTTTAAGACCTCCTTTTTCCCAGTTTTCATCGATTTGATTTCAT
CTCGATAAGAATAGAAAATAGGCTATTTTTACATAACTGTTACCGATCTG
ATCTGACCGATCCAATGTAATAAGACTAACTATGATCTTTTTTCAGTGGC
TCTTATCGTTTGTTTTCTTTACGTTCGTTGCATTCTAAGAGCGTACAATG
AGTAAAAGTTTCACTTTTTCTGCAAGGCGGAGTTATTTTAAACCGTTAAA
TAAACCCTAAAAGACAGTGAAAGTTTAGTCGTTATTTACGACCAAATAAG
GCATGCGCAGAAAAATATTGGGCAGTAGAATCGGATAAACTTCTGGTCAA
CTCTATATTCAGCACAATTGTGTTATTAACAGTTGGCATGACTACTGAGG
AAACGAGTGTTGTTTTTGAGTTTCCCTTTTTATACCACCGTATATTTATG
TTGGCTTGTCTTTGTAGTCGTGTATTTATTTTTAACTGTTAAAAAGTGCC
GTTTTATGGAATATTGTCATTTTTTGAGCTCTTTTTTCGTACCAATTTTA
AGTAAGTGCCGGTGTGACCGTTACCATAACTTTTTTCTGGTTATTTAAAT
GAATTGTTCATCCCCTAGAGAACATATCTCTGCCCGCTCTTTTTTCAGTT
TATCATACGAAAGTTGCAAGAATATAATTGGGATGTCAAGACGCAGAACT
TCACCATGTGGACACCTCTTGGACCCAAAAACTTCACTAATATTATTGGC
ACGCTTAATCCAAGAGCTGATAGGGTGCTAGCGTTAGCGGCTCACTACGA
TTCGAAAATCTTACCGGTTGTTAACGGCAAGTTTTTCACGGCAGCTACCG
ATTCGGCCGTTCCATGTGCTATGCTGTTGGATTTTGCAAGAGATTTGAGC
GACAAAGCAAAAGAAATTACGTCGGTATGTTTTTTTCTTTCGTTTTTAGT
CTTCTACACGTTTTTTATAAGAACAATCTATTTCAGAACATAAGGCTTCG
ACAGAACATTTTAACGCTTTGTTGACTCTAAAACACCTAGCTTCTTAGGA
AAAGTGACAAAAATACTTACAGTATGATGAAAATAAGAACATATTAAGAA
CATTTTTAGGCTTTAAAACTCAAAAAGTTAAGAACGTCCATAGGCTTAAA
ATGTTTTGGATATTCTTATTAAAAAATGTGTACTGGTCATTGGTCAATGT
CTTATCGACGTTTCGTTATTTAGGGAGGCGGAGTCATATTAATTTTTACG
TGAGCTTTAGATTTTTTAAATGCCCGCTATGATTAGAAAAATACTACTAT
GAAAATTAACGGGAGCTTTTTAATAGTTCACCATCACCTAAAAACTTCGC
CCAATCCGCAAACAGTCTTTATTTAGAAATGAATAAATTTTTAAAACAAG
TCTTAAACCAAAACAAAATTCAACATATGTCATTATTAAAACCTTTTTTA
AACGCCATCCAAATAATAAATAGGGAAAATTTAATGGAAAAATTTAAATT
TTCCTTTTTCGTTTCTATTTTCATTTACATATTATTTTATTTCGTTTTAA
CCGGGTGCTATACTTTTATTTTTGGAACTCCTTTCTTACTTTACGATGTT
TTTTTCAATCTACCGTTTAAGTTTTTATCATCAAAATTTAACACAGACGG
ACTTTTATTGGGTTTTCAATCACCCATCATACATCAATCACACAAAAAAC
TTTTTATCCTTTTCATCCTTTTCGGAACATGTTGATGGCGATATACAAAC
GCCCTTAAAATGACCAGCGATAAAGCTCGCCCTAACTATGAAAATGATTT
AGAAAAAATAATAATTGGGTACCACCAGTACGCCATTTTTCGGTTTCTGC
TAAGTTTCATGCCATCCACTTGGTCGTGGCTCTCCTCGGTTCTAACCTAC
TCTTGTCTCCAGAATAGACGCCCCCCCCCGCTAATTAANAATTACGTCGG
TATGTTTTTTTCTTTCGTTTTTAGTCTTCTACACGTTTTTTATAAGAACA
ATCTATTTCAGAACATAAGGCTTCGACAGAACATTTTAACGCTTTGTTGA
CTCTAAAACACCTAGCTTCTTAGGAAAAGTGACAAAAATACTTACAGTAT
GATGAAAATAAGAACATATTAAGAACATTTTTAGGCTTTAAAACTCAAAA
AGTTAAGAACGTCCATAGGCTTAAAATGTTTTGGATATTCTTATTAAAAA
ATGTGTACTGGTCATTGGTCAATGTCTTATCGACGTTTCGTTATTTAGGG
AGGCGGAGTCATATTAATTTTTACGTGAGCTTTAGATTTTTTAAATGCCC
GCTATGATTAGAAAAATACTACTATGAAAATTAACGGGAGCTTTTTAATA
GTTCACCATCACCTAAAAACTTCGCCCAATCCGCAAACAGTCTTTATTTA
GAAATGAATAAATTTTTAAAACAAGTCTTAAACCAAAACAAAATTCAACA
TATGTCATTATTAAAACCTTTTTTAAACGCCATCCAAATAATAAATAGGG
AAAATTTAATGGAAAAATTTAATTTTTCCTTTTTCGTTTCTATTTTCATT
TACATATTATTTTATTTCGTTTTAACCGGGTGCTATACTTTTATTTTTGG
AACTCCTTTCTTACTTTACGATGTTTTTTTCAATCTACCGTTTAAGTTTT
TATCATCAAAATTTAACACAGACGGACTTTTATTGGGTTTTCAATCACCC
ATCATACATCAATCACACAAAAAACTTTTTATCCTTTTCATCCTTTTCGG
AACATGTTGATGGCGATATACAAACGCCCTTAAAATGACCAGCGATAAAG
CTCGCCCTAACTATGAAAATGATTTAGAAAAAATAATAATTGGGTACCAC
CAGTACGCCATTTTTCGGTTTCTGCTAAGTTTCATGCCATCCACTTGGTC
GTGGCTCTCCTCGGTTCTAACCTACTCTTGTCTCCAGAATAGACGCCCCC
CCCCGCTAATTAAATTCGAATAATTCAATATTTTATTACAGTGTAGATAG
ACCTTAAACTTGGTAAAATTTTCCTTTTTGTTAGTATTGGTTCTTATTTT
ACGTGTTAAATTTGTTAAAGTTTCGTTTTTGTTGTTATCAGTAAAGAAAT
TATGTCTTCAAATTAAACCCCCTGTTATTCCATCCCCCCCTGCTTACTAG
AATTTACAAAATTTTCTTACCCCCCTGCTTATTCGGACCCCGCCCGTCTT
TTCGGGAGACAAGAGTAGCGACATACAAGACTACCGACAAGACTCTGAAA
AAATTACACGATCCCATTATGATAACAAAGCCAAATTGTTGTGCTAAACT
ATAAATGATCGATTTTTTTAGCTATAACAAAGGAGCTGTAACATCGCCAA
TCAAATTCTAAAATGTGTTTGACTACCATTTTTAACCAGATAAACCCACT
GCTTCTCCCCCGCCGGGGTTTAGAACCCCATGGTAATTCAGAAATTCTTT
TACCATAGACATTGGAACAAGTATCGCCACAACTTTTATTCCTTGATGGG
GAAGAAGCATTTGTTGAATGGACCAAGACAGATTCAATCTATGGATCCAG
ATACATGGCTGCTTCAATGTCCAATGCTTCCCATTGGAATCCGAAATTAG
CTTTACACGAAATCAGTCAGTTAGATTCTATGGTAAGATGATTCGGAGTA
AAGGCTTTGGGGACACGAGAAGTTTTTGCGTTGGTGCAATGCAACATGCT
TCATCTCACCGACCTGAAACGCTTTCTCGTGTCTCTGCCCCATTTTTCTG
TTAATAGCATTTGTTCTTCTATCACCTTTGAAGAAGAAAAATTGATTCAA
ATCAAAATCAGCGTGTCTTTTGGGTATTTCCCTCACTTTTTGTTCCATCA
GGGTTTGAGACAAAAAAAGAAACCATGAGACACGCACTTTTTTCTTGTGT
TGGTGGGATGGAGTATATTACATTGCACCAACGCGAAAAAGCACTTCTCG
TGTCCCCAAGCCTTAAAGCCTTATATCTCTTATATAAAACACTAGATAGA
GCTACTCTATCTTTTCCAAGGCAAGACAGGTGAGGCAAAATAATGCGCCA
TTTTTGCCGAAAGTAGGTCACAGTAGAAACCCTAGTTTTCACTGTTGAAA
CTTTTTTTGACACTGCAATGACTTCAAACAAATCCTTCATGGTGTGTCAA
AGTTATTTAAGACTCCTGTACATTAGTAACTATGGCGAATGATTACGTCA
CTGCAATAAAGGGCCGCTCAAAGCGCAAATTTCATTTCATTTTTTTTTAT
TTTTTGTTGAAGGATGCTTTTGTGCTTCTCGATTTGCTTGGTGCAAAAGA
TCCGACCTTTTATAATTGGTTTCCAACCACGAGTCGATTGTATGAAAGTT
TGAAGAAGATAGGTAAGGGCCTTTTTTAAACGGAGCCGTTTATCAACCTT
AATTGTCGATCGTTTTAAGCAAGGCTTTATTTACACTTTATATAGTAAAA
GCCAATGGGATAGAATCGAATCTCTAACCTTTCTCAGGCAAAGAAAAGGT
GAAGCCTTAAAATATGCGCCGTATTTTTGACGACGGATTGAATATAGCAA
TTCTTTTGTTTTCGAGTGATATTTTTTTCGAAATTTAGCGGTAAATTCTA
GTGGTTATTTCTGCAGTAGCTGATACGATCTAGTCATGTGACCCATGAAA
ATATCTTTCGAGAAGGCCAAGCCTAGAGCATTAGTTGGATATATGATCAT
CAACTAAAGTGGCAATCACGTTGAAAATCGAGCATCAGTTGATTTTATGG
ACGGCAAGGAGACTAGTATTCTGTACAGAGTGTATCTTTTCGATTTTGTA
CCAGAGTGTATTTCTTCGTAGTACACTCTGTGCGCACCGTCTGTTTGATA
AAAAAATTCCCGCACAGAGACCTCTGCANCAACGCGAAAAAGCACTTCTC
GTGTCCCCAAGCCTTAAAGCCTTATATCTCTTATATAAAACACTAGATAG
AGCTACTCTATCTTTTCCAAGCCAAGACAGGTGAGGCAAAATAATGCGCC
ATTTTTGCCGAAAGTAGGTCACAGTAGAAACCCTAGTTTTCACTGTTGAA
ACTTTTTTTGACACTGCAATGACTTCAAACAAATCCTTCATGGTGTGTCA
AAGTTATTTAAGACTCCTGTACATTAGTAACTATGGCGAATGATTACGTC
ACTGCAATAAAGGGCCGCTCAAAGCGCAAATTTCATTTCATTTTTTTTTA
TTTTTTGTTGAAGGATGCTTTTGTGCTTCTCGATTTGCTTGGTGCAAAAG
ATCCGACCTTTTATAATTGGTTTCCAACCACGAGTCGATTGTATGAAAGT
TTGAAGAAGATAGGTAAGGGCCTTTTTTAAACGGAGCCGTTTATCAACCT
TAATTGTCGATCGTTTTAAGCAAGGCTTTATTTACACTTTATATAGTAAA
AGCCAATGGGCTAGAATCGAATCTCTAACCTTTCTCAGGCAAAGAAAAGG
TGAAGCCTTAAAATATGCACCGTATTTTTGACGACGGATCGAATATAGCA
ATTCTTTTGTTTTCGAGTGATATTTTTTTCGAAATTTAGCGGTAAATTCT
AGTGGTTATTTCTGCAGTAGCTGATACGATCTAGTCATGTGACCCATGAA
AATATCTTTCGAGAAGGCCAAGCCTAGAGCATTAGTTGGATATATGATCA
TCAACTAAAGTGGCAATCACGTTGAAAATCGAGCATCAGTTGATTTTATG
GACGGCAAGGAGACTAGTATTCTGTACAGAGTGTATCTTTTCGATTTTGT
ACCAGAGTGTATTTCTTCGTAGTACACTCTGTGCGCACTGTCTGTTTGAT
AAAAAAATTCCCGCACGGAGACCTCTGCAATGAAGTATAATTTATAAATA
GCAACACTTCTCTCGTCATTTCCCTTCTCTCACCAACACTCCATCGCAGT
GGTCAGTTTGAAAAATCTCAAAGACAATGACAACAGACCCTCTACGGCAA
TGAATTTTGAAATTAGCCGTAGATACTGGGTCTGTTTACAGACAAGGAGA
CTAGCGGTTGGATTACAGAATCTTCATGTTATTTATCTCGAAACTTCTTT
ATGTGTTTTTATATATTTTCCACAGAGAAGAACCTTCGAGCAGAGGGCCA
GTTATTTGGTGTGAATCACAAANAATTTCATTTCATTTTTTTTTATTTTT
TGTTGAAGGATGCTTTTGTGCTTCTCGATTTGCTTGGTGCAAAAGATCCG
ACCTTTTATAATTGGTTTCCAACCACGAGTCGATTGTATGAAAGTTTGAA
GAAGATAGGTAAGGGCCTTTTTTAAACGGAGCCGTTTATCAACCTTAATT
GTCGATCGTTTTAAGCAAGGCTTTATTTACACTTTATATAGTAAAAGCCA
ATGGGCTAGAATCGAATCTCTAACCTTTCTCAGGCAAAGAAAAGGTGAAG
CCTTAAAATATGCACCGTATTTTTGACGACGGATCGAATATAGCAATTCT
TTTGTTTTCGAGTGATATTTTTTTCGAAATTTAGCGGTAAATTCTAGTGG
TTATTTCTGCAGTAGCTGATACGATCTAGTCATGTGACCCATGAAAATAT
CTTTCGAGAAGGCCAAGCCTAGAGCATTAGTTGGATATATGATCATCAAC
TAAAGTGGCAATCACGTTGAAAATCGAGCATCAGTTGATTTTATGGACGG
CAAGGAGACTAGTATTCTGTACAGAGTGTATCTTTTCGATTTTGTACCAG
AGTGTATTTCTTCGTAGTACACTCTGTGCGCACTGTCTGTTTGATAAAAA
AATTCCCGCACGGAGACCTCTGCAATGAAGTATAATTTATAAATAGCAAC
ACTTCTCTCGTCATTTCCCTTCTCTCACCAACACTCCATCGCAGTGGTCA
GTTTGAAAAATCTCAAAGACAATGACAACAGACCCTCTACGGCAATGAAT
TTTGAAATTAGCCGTAGATACTGGGTCTGTTTACAGACAAGGAGACTAGC
GGTTGGATTACAGAATCTTCATGTTATTTATCTCGAAACTTCTTTATGTG
TTTTTATATATTTTCCACAGAGAAGAACCTTCGAGCAGAGGGCCAGTTAT
TTGGTGTGAATCACAAACATTACTCTGGTCACTACTTCACTGGCCAACGG
CCTGAAGATATCGGAATCTATGGCAAGATTGATGATGACCATGTCCCGTT
TATGCAAAAAGGTTTGTTTGTCATCTTTATTGCCTACTTACTACTTTATA
CAAAATTAACTGGCCATTAATATGAAGTGACTAAGTGATATCGCTAGAGG
TACAAGGCTATATGAAAGAAAAAAAAAAGATTTTTCATACATAAAATTGA
TTTAAAAAAACATAAGCTATGATTGTTTAGAGTTAAAATAGTTTAAAATA
GTGCCTCCACTGAACATACCGGTTTCATGCATCAAAACAACCAAAGAACA
AAGAATCGCTTGGTTCGTTCAGAAGTGAAGTTAGGCTTTCATCACCATAT
AATAAAAGCCGACAAAATTTAGAGGGATCGAGTGGGAAAGAATTTATGTC
TAAGGTATATGAAGCTTGTTGAACAGTTGACTGTCTTTCATAGGAGTATA
TACTCACGGTTTTAAACATAATCGTATAAAGGCCGGTCTCCACTTTCGCG
CAACATGAGCGAAAACTTTTCGACGTTTTTGTAAGGTCATTGGTCGGTTG
AAAAATGAAGCAATTCCATTGGTCAAAATTGACGTAACGGTTGAAAACAG
TTGAACTTCCTTCGACTTTTTTTTTGTTCGTGCGAAACTTTTTTATAACG
TAATCTTTTTTTTTGGCCAAAAAGGTTGAGAAAAAAACTGTCGCCCATTT
CGCGCGAAAGTGGATACCGGCCTTAACCAAATTTGAGCTATGGTAATTTT
CATAAAATTGGCTACGATAACTCAGGTACAACATTGTGTTACAAGAGTGC
ATCTATACGTTTTTTATAAGATTTTTTAATATTTTTGAAGCTTTCGGATG
TTCTTAAATTTTTTGAGTTTTAAAGCCTAAAAATGTCCATAGCATTAGGG
TATTTCGCGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
GGGGGGGGGGGGTATTTTTGTGCAGTTTCTTAAGAAATTGGGTGTGCACT
CTAAGCACAAAGGCTTTAAAATGTTCTTATTTTTGTCTCAATATTTCGAC
CATGGAAGCCTTAAGTTTATATAGTTTGTGTATTTATAAACGTGTATGGG
TGGTCAAAGTAATCAAGGCTATTGCATTATCGTGACAGAAAACATCGGTA
GAAAGCTTAGAAGGGGAAAATTCTCGCGTATTCCAATTCGTTAAACTTGC
CCTTTGAAATTTTTCCACAAAAGTTTTCGTTAATTTACTTAAAGGGACAT
AAAAGTTTTATTTTCCTTTAATTGAGCGCTCTCCTTGAGCTGGAAATGGA
CTAATTTCTACCCTTCCCCTCTTTCCCAACTCCCAAATATATTATTCTCT
CTTCTCTAAACCGNTTAAAGGGACATAAAAGTTTTATTTTCCTTTAATTG
AGCGCTCTCCTTGAGCTGGAAATGGACTAATTTCTACCCTTCCCCTCTTT
CCCAACTCCCAAATATATTATTCTCTCTTCTTCTACAATTATTATATTTA
AAAGTTTTACCAGACCCCCTCTATCGGCTTTATTTTTCAAATCGGTTTTA
TCTTTAGGAAAATCATCCGGCTTGATTTTCAGTATATCTCAGTTATCCAA
TAATTTTTCCATATAATAGTATAACCGAAACTGAGAAAATCTGAGCTTGC
CCTTTCCTCTCTTTGTTTGTGGTTCCTTTTTCTATTTTCCAATGAAAAAG
GAAGGAAAATTTTTTGGGGTTTTTAATTAGTCGGCGGAAGAAATTTTGTC
ACCCAAAAAGACGTATTTCGTCTTTTTTCCCGAAAAAATNGGAAAATTTT
TTGGGGTTTTTAATTAGTCGGCGGAAGAAATTTTTCCCGAAAAAAATTCA
ACTTCTTACATTTTTCCCCGATAAGAATGACTTCGCCAAAGAATTTTTTA
GAATGCAAATTAGAATGCAAAGCAACTCCAGCCGTAAGTCCCAAAATTCG
GGTTATTTTTTTAAAACAATGTATAGTGATAGACATCGTACAACCGTGTC
GAGATTTGAGAACTCACTCGCTTCGGGTTCCTGATTCAGTCGTAGACTTT
GTCATGGCGCAAAACAACAAGCACTCCTTTTACATGAAGGATTAGAGGGG
CGCATCCCTCTTCATTGATACATGATATAAACAAGGGTCTTACAAGACTG
AAAGATTGACATAGGGTTGAAATTCTTTCAAGTTAAGTGAATTGCCAACC
TCGTCCCCATGACGATTTGCTTTTTTACATAGGATCGCGCAAATTGATTA
TCAAAAGCTTTCTGCGAAAGTTTCACTTACCAAAAATTCCGTTACAGCCC
CCCTCCTTTAATACACTCATTTTGCATACGGTAAATTTCGGCTGAAGTTC
ACTATGCTTAAGTAAAGCTCAATTTTTAGCCTCGACTATGCTTAACCCTT
AAGATTTTTCGCGCATTTTCCCGCTCTCTTTAATCTTGAGAGAAGAGAAA
TGAACACATTCTATTGTTTTCGAATGTTTACCATATGATTTATGATTCTT
TCTTCTGTTATTTTCTGAAGTTTTGGAAATTATGATTCTAAAAATTTCTT
TGGCTGAGCCTCAAGGTATGCTTAGCATATGCTTAATTTTTCTGGAAATT
TGAGCTTCAGTTTGCTTATAAACGTTATGCTTATAAAACAAAATGAGTGT
ATGACAGGAAAAATTTAGCTGAAACCGGTAATTTGGGGTGTCAGGGTCAA
AGGTGAATATCCGGAGGATGATACCCGTTATTTCGAGGAAGGGCAACCTA
ACCCTTTTTTAATTTTTTTTTCTAGAAAGGTTTATTTTATAGTATTATGT
TTTATTTGACAGGTGTTCCCATCCTACACATCATCCCCTACCCGTTCCCC
TCCACGTGGCACACACTCAATGATGATGAAGAACATCTCGATCCAACCAC
CATTGAAGATCTTCTCAAAATATTTCGCCATTTCATTTTCTCCTATTTCT
CACTTGAATGAATGGATTGAACGAATGAATGAATATAAACTCACCTGGCA
CGCGATGTTGTTTTGGTGTTCGTCTAACGTCCACGCCCATCTACATAACG
TAATATAAATGTTCGATGAACGTACTGTTCAAAAGTTGTGTTGGTTTCTT
CCTTTTCCCCGGTGAGTGAATATTGAGTTTGGAATATTATTAAATGAAAC
GAAATTTGGGATTTTTAACTAGTATTTATAGTGAATTTGATTTTGGATGG
TCTACAAAAGCACACTAAACTAGAAAATGTATCAAAAATGGAAATGATAA
CTCTGCGACAAGGAAATTACCAAAACAACGAAATCCTTATTAACATACGT
TAGTTAAACGTTTAAATAACATTCAAGTGATCTGTGCCTTTTGTGGATTA
TTCAAAATCATGGCAGACTGTCATTTTGAATTATTGTCATATCTAAAATA
AACTGTGATGTACAGTTGGAGTCTCAATATAAATCGAACGTCTATGGAAA
AGTATATTTATTGTTCGAATTGTAGAGACTCCACTGTCAAAGGTTTTGTT
TCCATCATAAGCAACTAGCCCCAAACACCACCAACAGTCAATCATTATAA
GTGCTTGTGGGCTAAACTCTGTAAGTTTTTCATATGACAATCTTTCATTT
TTAAATAATGTAAATTCCTAAAAGAAACAATTATAATTTATTAGCACTTA
AAAAATGATATCTAAGATATTTATTCAATGTAACTGTGATAAATGACTCG
GTTTTTAACATGAAATCAAGTCGATTTTTAATGTGCCGGTTGTTTTTTTT
ATTACAATTTCGTTTTCTGGGCTGCACATATGCCTCTAAAATTTAGAGAT
TTTTTATACTCTTTTGTTTAACATATAAAAGAAATAGTGTTAGACTAAAA
TACTTACCTAAAAGCTGTTTGTCTGTCTGACAGTAAGACAAAGAAGATGT
TTCAATTTAAAAGAAATTTGATTTGATATAACTTGGAGAAAGGTATCCCA
GAGCTGATTTTTACTTATCATTTTCAGAAATAATATGAAATTTTCTTCCT
CAAATTTTATTAGTTTCAATGGTTCACTTATGCATGATATTTATGATGAC
GTAATATTTTATACGGAAGCACAAAAATATAGCCTGGCACTAGTTTTATT
GTTTAAATCAAAAATCAGTGACAAACACACGGTATTTTTTTGGGTGTTTC
CCTATTAAACATTACGTCATGAATATCACGAATACGGTACTTATGTCTTG
CACACTTTTTTGGATACCATATAAAAAAGAAGTGCATCTAAATTTATTAT
CAGATATTCCGATGGTGGATTGGTGGCCGCCCAATATAAAGCTCTGAAGG
AGCGGGCCATTTTCCCATCGGAGAGGAACGATAGTCGGCCTTTGATGTGC
CGCATCTCCAGTCAGGTTCAACTTCTTTCGCACGTAAACCTAAAAATATT
TTGGTTGGACTCGCCAATCCCCGAATACGAGGGCTGGGTTACCACATACC
AGGCCTCCCACTGCAAAATCCTATATGCGGACTTGCAAAATTCCGTAATC
TAAACATACCGGATGTTGAAATTTTACCCGACCATCAAAGCTTTAGCGTG
CCGGATGAAAATTTCTGCATGTGGTTGCCTGATAACATTAGGTTAATTTT
CCGTATTTTGAAATTATATGCATTTTAAAGGGATATTCTATTATTAGTGA
CAAGAATAATGATATTGTTAAAAAAAATATAAAATATATTCTATAAGTAA
ATACTCGAATTGGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035800XLOC_035800Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056828-exon-scaffold_283-1575043694:119545..119693TCONS_00056828-exon-scaffold_283-1575043694:119545..119693Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:118238..118384TCONS_00056828-exon-scaffold_283-1575043694:118238..118384Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:116770..117045TCONS_00056828-exon-scaffold_283-1575043694:116770..117045Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:114062..114235TCONS_00056828-exon-scaffold_283-1575043694:114062..114235Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:112381..112480TCONS_00056828-exon-scaffold_283-1575043694:112381..112480Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:111436..111618TCONS_00056828-exon-scaffold_283-1575043694:111436..111618Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:110533..110673TCONS_00056828-exon-scaffold_283-1575043694:110533..110673Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:107283..107581TCONS_00056828-exon-scaffold_283-1575043694:107283..107581Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1575043694:105680..106918TCONS_00056828-exon-scaffold_283-1575043694:105680..106918Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:119545..119693TCONS_00056828-exon-scaffold_283-1510915933:119545..119693Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:118238..118384TCONS_00056828-exon-scaffold_283-1510915933:118238..118384Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:116770..117045TCONS_00056828-exon-scaffold_283-1510915933:116770..117045Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:114062..114235TCONS_00056828-exon-scaffold_283-1510915933:114062..114235Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:112381..112480TCONS_00056828-exon-scaffold_283-1510915933:112381..112480Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:111436..111618TCONS_00056828-exon-scaffold_283-1510915933:111436..111618Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:110533..110673TCONS_00056828-exon-scaffold_283-1510915933:110533..110673Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:107283..107581TCONS_00056828-exon-scaffold_283-1510915933:107283..107581Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1510915933:105680..106918TCONS_00056828-exon-scaffold_283-1510915933:105680..106918Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:119545..119693TCONS_00056828-exon-scaffold_283-1491911889:119545..119693Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:118238..118384TCONS_00056828-exon-scaffold_283-1491911889:118238..118384Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:116770..117045TCONS_00056828-exon-scaffold_283-1491911889:116770..117045Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:114062..114235TCONS_00056828-exon-scaffold_283-1491911889:114062..114235Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:112381..112480TCONS_00056828-exon-scaffold_283-1491911889:112381..112480Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:111436..111618TCONS_00056828-exon-scaffold_283-1491911889:111436..111618Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:110533..110673TCONS_00056828-exon-scaffold_283-1491911889:110533..110673Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:107283..107581TCONS_00056828-exon-scaffold_283-1491911889:107283..107581Clytia hemisphaericaexon
TCONS_00056828-exon-scaffold_283-1491911889:105680..106918TCONS_00056828-exon-scaffold_283-1491911889:105680..106918Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_283supercontigscaffold_283:105680..119693 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.018801	0.0260472	0	0	0	0	0	0	0	0	0	0.0626504	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0.00164917
Blast
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BLAST of TCONS_00056828 vs. Swiss-Prot (Human)
Match: QPCT (Glutaminyl-peptide cyclotransferase OS=Homo sapiens GN=QPCT PE=1 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 4.254e-55
Identity = 130/395 (32.91%), Postives = 194/395 (49.11%), Query Frame = 3 
Query:  144 QKRLHKLKEYSQKATKRLAALSDYSNFYNKYLTEILRSRVPGTVGHARVKNFIIRKLQ--EYNWDVKTQNFTMWTPLGPKNFTNIIGTLNPRADRVLALAAHYDSKILPVVNGKFFTAATDSAVPCAMLLDFARDLSDKA---KEITSTLEQVSPQLLFLDGEEAFVEWTKTDSIYGSRYMAASMSNASHWNPKLALHEISQLDSMDAFVLLDLLGAKDPTFYNWFPTTSRLYESLKKIEKNLRAEGQLFGVNHKXFHFIFFYXXXXXXXXXXXXXGAKDPTFYNWFPTTSRLYESLKKIEKNLRAEGQLFGVNHKHYSGHYFTGQRPEDIGIYGKIDDDHVPFMQKGVPILHIIPYPFPSTWHTLNDDEEHLDPTTIEDLLKIFRHFIFSYFSL 1313
            +K  H+    +  A +++A  +  S  +   L  +L  R PG+ G    +  I++++Q  + +W ++   F   TP G ++F+NII TLNP A R L LA HYDSK     N + F  ATDSAVPCAM+L+ AR L  K    K ++ +   +S QL+F DGEEAF+                      HW+P+ +L+    L +        +     P                       R   QL G++                 VLLDL+GA +PTF N+FP ++R +E L+ IE  L   G L          H   G+  ++    G I DDH+PF+++GVP+LH+IP PFP  WHT++D+EE+LD +TI++L KI + F+  Y  L
Sbjct:   39 EKNYHQPAILNSSALRQIAEGTSISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHYDSKYFSHWNNRVFVGATDSAVPCAMMLELARALDKKLLSLKTVSDSKPDLSLQLIFFDGEEAFL----------------------HWSPQDSLYGSRHLAA-------KMASTPHP--------------------PGARGTSQLHGMD---------------LLVLLDLIGAPNPTFPNFFPNSARWFERLQAIEHELHELGLL--------KDHSLEGRYFQNYSYGGVIQDDHIPFLRRGVPVLHLIPSPFPEVWHTMDDNEENLDESTIDNLNKILQVFVLEYLHL 361
The following BLAST results are available for this feature:
BLAST of TCONS_00056828 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
QPCT4.254e-5532.91Glutaminyl-peptide cyclotransferase OS=Homo sapien... [more]
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