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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056789 ID=TCONS_00056789|Name=TCONS_00056789|organism=Clytia hemisphaerica|type=transcript|length=888bp
aaataatctgcaacatatctgtagaactgacaaaacaattatctggagcc
aaagtgatcaacgaatccagtgtggtaaaaaattatacactcaNAATTTT
TCGACTTTTCATCGAGCAACAAAATTTTATCTTgaccttttttcaacttt
catttgGGCACGAAAACTTGATTCTATAATTGTATAGTCGAGAAAAGTGT
TTATAATGTCtttactcttgggtacctaataaacgggggCTTTGGAATAA
GCTGGGTGGgtggtacccgagagtaggtgaAGAAGTTTTCCCCGACTATA
TTACAGAGCCGACCGACTTATTTTTCCCCCATAATTAATGTCATTATATA
GTCAGAGTCTTAGAGGCAACGGCATAAAGTCTTGGGTCTTGGGCCTTTGC
AAAGGGGATGTTGTCGGGACCAAATGATGAATAGGCTCCAATGTTTGACG
TCAATTCTTTCAGAGGCAGGCTAGAAATATAAAAATTCACAAGAAAAGCC
AAAAATATTCACCAAATAAAACATTTACGTagcttttttgtttatttgct
CAACAAGCTTTTGGTTATTCGAGTAACTCTgatttttcatttaagcacTT
GAATCTGTTTTGGTTGCCTAAAGGTTGAATATACGTCTTGGTGCTTTGTC
TAGAATGTCTGCATTGAATTCTAGTTGCATTTCAAAGCTGCTTATTTATC
ATTGGAGTGATCTAACTTTACAAGGTGACGGGTTTATGAACTTCAAGTCC
GATTTTTgtaatggttcttataaaagagaTGTTCTTAAGTTTAAATTACA
CCGTGTGAAAATGGTGGCCGGTGTGTAGAGAAAGGAATCAAACACCAATT
AAAAGACGCCAAAATTTTGTATGAGTTGCATATTTAGG Run BLAST on NCBI transcript from alignment at scaffold_282:73666..74553 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056789 ID=TCONS_00056789|Name=TCONS_00056789|organism=Clytia hemisphaerica|type=transcript|length=888bp|location=Sequence derived from alignment at scaffold_282:73666..74553 (Clytia hemisphaerica)
CCTAAATATGCAACTCATACAAAATTTTGGCGTCTTTTAATTGGTGTTTG
ATTCCTTTCTCTACACACCGGCCACCATTTTCACACGGTGTAATTTAAAC
TTAAGAACAtctcttttataagaaccattacAAAAATCGGACTTGAAGTT
CATAAACCCGTCACCTTGTAAAGTTAGATCACTCCAATGATAAATAAGCA
GCTTTGAAATGCAACTAGAATTCAATGCAGACATTCTAGACAAAGCACCA
AGACGTATATTCAACCTTTAGGCAACCAAAACAGATTCAAgtgcttaaat
gaaaaatcAGAGTTACTCGAATAACCAAAAGCTTGTTGagcaaataaaca
aaaaagctACGTAAATGTTTTATTTGGTGAATATTTTTGGCTTTTCTTGT
GAATTTTTATATTTCTAGCCTGCCTCTGAAAGAATTGACGTCAAACATTG
GAGCCTATTCATCATTTGGTCCCGACAACATCCCCTTTGCAAAGGCCCAA
GACCCAAGACTTTATGCCGTTGCCTCTAAGACTCTGACTATATAATGACA
TTAATTATGGGGGAAAAATAAGTCGGTCGGCTCTGTAATATAGTCGGGGA
AAACTTCTtcacctactctcgggtaccacCCACCCAGCTTATTCCAAAGc
ccccgtttattaggtacccaagagtaaaGACATTATAAACACTTTTCTCG
ACTATACAATTATAGAATCAAGTTTTCGTGCCcaaatgaaagttgaaaaa
aggtcAAGATAAAATTTTGTTGCTCGATGAAAAGTCGAAAAATTNtgagt
gtataattttttaccacactggattcgttgatcactttggctccagataa
ttgttttgtcagttctacagatatgttgcagattattt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056789-exon-scaffold_282-1491911889:73666..74553 | TCONS_00056789-exon-scaffold_282-1491911889:73666..74553 | Clytia hemisphaerica | exon |
| TCONS_00056789-exon-scaffold_282-1510915933:73666..74553 | TCONS_00056789-exon-scaffold_282-1510915933:73666..74553 | Clytia hemisphaerica | exon |
| TCONS_00056789-exon-scaffold_282-1575043694:73666..74553 | TCONS_00056789-exon-scaffold_282-1575043694:73666..74553 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_282 | supercontig | scaffold_282:73666..74553 . |
Blast
The following BLAST results are available for this feature:
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