TCONS_00056771 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056771
Unique NameTCONS_00056771
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length976

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056771 ID=TCONS_00056771|Name=TCONS_00056771|organism=Clytia hemisphaerica|type=transcript|length=976bp
TCagtgacaaaaatattcaaaatagaTAGGATGATTTCAAGCAATGTCAT
TTAGATATAGTTCGTGAAACCATGGTTGAGATTGTGACGTCGGCACCTGG
CAAAATCATTCTATGTGGCGAACATGCTGTTGTCTATGGGAAGgaagCCT
TAGCGTTCAGCTTAAGCACCACTACACAATGTTGCTTGAAAGAAAACATG
AACAACCCTTCTCAAATCAGAATCAAGGTGCCAGATCTACAAATTGATGA
AACGTACAATGGAGAAGATCTTGAAAAGGCTTATGGTGATAGCCTGCAAA
AAGGTTCTGGAGATGTCCAAACATGTCAGCTCTTTGAGAATGAAGAAGAC
ATTTATGAACGTTTACTTTCACCAGAAATAGATGGAACCAAAAAAGCTGC
ACTCAAATTGATTTTGGTTTTATACATGCATCTCGCTCATTCGCAAACTA
CTCCAAGGAAGATTGGTTTGTGTATTTCTTTCAAATCAGACCTTCCGATC
GGTGCTGGTCTTGGCTCGTCTGCGTCGTTTGCTGTCGCTACCGTGTCTGC
CATGTTGGTTTATACTGGAGTTTTACCTAGCAACCAATCAGATTGGACAG
AGAAAGATTATGAGGTCATCAATGGTTGGGCGTACCAATCAGAACGCATT
GTGCATGGAACTCCATCGGGAATCGATAATTCGATAAGTACATATGGGCA
ATGTGTTAGTTTCAAGTCGAAGAAGATCGAGCGGCTGAAAAATTTTAGCG
AGTTGAATTTGAAAGTTGTGTTGATCAACACGAAGAAAAGTCGAAGTACG
AAAGCTCTGGTGACTGGTGTCCGACAACGAAATGATAAGtatCCGAAGAT
CTATCCTCATATTATGGATACGATCGAACAAGTCACAGAAAAATTCAAAC
ACAATTTGATGGAGCTTTCAAGTGGTTCAGTGACGTCTTGGCGGGTATCT
ATTTTACATTCATAAAGTTATTGACA
Run BLAST on NCBI

transcript from alignment at scaffold_282:172759..189663-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056771 ID=TCONS_00056771|Name=TCONS_00056771|organism=Clytia hemisphaerica|type=transcript|length=16905bp|location=Sequence derived from alignment at scaffold_282:172759..189663- (Clytia hemisphaerica)
TCAGTGACAAAAATATTCAAAATAGATAGGATGATTTCAAGCAATGTCAT
TTAGATATAGTTCGTGAAACCATGGTTGAGATTGTGACGTCGGCACCTGG
CAAAATCATTCTATGTGGCGAACATGCTGTTGTCTATGGGAAGGTAGGGT
TTTTTATGGATTTTCTTTCCGGAATCATCTTTGCCGTAACCCCACTACTC
TTGTTATCTTGTGTCCGTAAAAATTTAGGAGAAAGCTTTTCTGACACAAT
AGACATATCAATATCCAGGCTTTTAGACCTTATTCTTATAAGAGTAGAAG
AGTTTACACTGGAAACGAAGGTGAATATAATGACGTAGTAGCCAAATAGA
CTTAGTCTTCATTCCATGTTATTGCGATTTTCGATTATTTTAATCAATTG
TGAAAAATCAAATCTTTAAAATCCTTGAAATTCAGTATGGAAGGCTGCAT
CTTTTACTTTGAACTATTTTAAGACGTTAGAGTGAAAAACCAGGGCTCCC
AGAAGATTAAAGGTTTTAAGTGTCTGCATATCAGACACATATTTCATATC
AGGACATCATCATTTGCGAAAGTAGTTCTAATGAATTTATGCAAATAAAT
ATATAGAAAAATTGTTATATTGTTATATTATGCTGATATAAGCAAATGTT
TTTCTTTTCCTCTTTCTGACTAATCTTGCTCCACATCCGTATCAATCCAA
TATGAAAAAGCTTGCGAATTAAAATTGATGAGTAAGCAAACGATATCACT
CTTATTTATAAACAAAACCTTTAAATGAATACTAAAATTTGTTCAATCCA
ATATTTCAATTTTCCAGGAAGCCTTAGCGTTCAGCTTAAGCACCACTACA
CAATGTTGCTTGAAAGAAAACATGAACAACCCTTCTCAAATCAGAATCAA
GGTGCCAGATCTACAAATTGATGAAACGTACAATGGAGAAGATCTTGAAA
AGGCTTATGGTGATAGCCTGCAAAAAGGTTTGTAATGTTTCTACAATTTC
TGATTCTTTCGGGATGAATTCGAGATGGGTCCAGATTCATTAGAAGCTCA
AACGAATCACAATTACAACCAAAGAACTCACCAATGATATGCTGTTCGGA
AAAACGCAAACATAAAATTTCTGGTTAACCACTTCTGTATAAGCGCCCCT
GATCTTTAAGTCTTCTTTTGGTAAAGTAAATACTCTGTACAAACTTTTTT
TTTCTCTCTCAAGGTTCTGGAGATGTCCAAACATGTCAGCTCTTTGAGAA
TGAAGAAGACATTTATGAACGTTTACTTTCACCAGAAATAGATGGAACCA
AAAAAGCTGCACTCAAATTGATTTTGGTTTTATACATGCATCTCGCTCAT
TCGCAAACTACTCCAAGGTTTGTATGTACGTTTGTATGCATCATGGAGCG
ATGGCCAAGTGGTCAAAGGCGTTAGGGTCTCAAACCAGGGATTCGCAGTT
CGAATCCCCGCTCCTTCCAATGTTCCGTAAAGTTCATAGATAGCCGAGCC
GGCTGGCCGTGAACCCCGTGAAAACAATCGAAAGACTGTCTAAAAGTCCT
AGATTACTGGGTTATCCACGTAAAATATCGACTCTATCTCTGTCTATCTA
TCTATCTACCTATAGCAATCTTTCTGTTTCTGCACAGCGAAGTACTTCCG
AATATCGAAAATATCCTAAATTAAGAAGTTACTAGCCTTCCCATACTAGG
CTTCGTAGTAGTATTCCACTTTGCGACATTTTTGAATTTATGGAGTCAAA
AGTTTTCGGGCTATATTTCGATTTTTTAACGTCAATTGAAACTTTCGAAT
CTCTTGCAAAAAACAAATTTGCATCAAAGGATCAAGGCTTCTTTTTCCAA
AAACCATTCAAGTGAAAACCATGAAATGATATTAAGAATACTGATTTTTG
TCAATAAATGGTTATTTATTTACACCGAGTTACACCGACTGTCAATTTGA
CATTATAATAATCTTTCTAGGAAGATTGGTTTGTGTATTTCTTTCAAATC
AGACCTTCCGATCGGTGCTGGTCTTGGCTCGTCTGCGTCGTTTGCTGTCG
CTACCGTGTCTGCCATGTTGGTTTATACTGGAGTTTTACCTAGCAACCAA
TCAGATTGGACAGAGAAAGATTATGAGGTCATCAATGGTTGGGCGTACCA
ATCAGAACGCATTGTGCATGGAACTCCATCGGGAATCGATAATTCGATAA
GTACATATGGTAAGTGATTTCAGAGTTGAAACAGATATCGACTTTATCCA
TATTGTTCTCTTTTTTATCCTGGGAGGGGGCGGTGCCTTGGTATTTGTCT
TTTTTAAGTTCAAATTTAGTCTCTTTAAAGGTCAGTTTATGGAAGTCTGG
TCTGCATATTTCTCGTTCGGGTTCTCGTGGATTAAAACATATAAAAAGAC
TTTACTTTCCATTTCTAGGGCAATGTGTTAGTTTCAAGTCGAAGAAGATC
GAGCGGCTGAAAAATTTTAGGTAACTTTATTCCTGATATGGAAGGTAAAA
AGTCCTCATGTCGAAGTGGTTGGAATGTCACTAATACTGAAAAGAGCTAA
ATTTTTCATTTGAAGGATTATGCTAAAGTTTAGTTGGTCTGATTCCGTCC
ATAAAATCATGATTTTGTATAAAGCTTCATCGTAGGCTATGTTACCGGGT
GATCCAAAAAAAGTTTCCATAAATTTCAAATTTTGCCGTAGAGCGCTCTA
ATTGTGCTATCGACTTTTTGTATGGGTAAACTTTAACTTATTTCAGGGCA
CTTCAGAAAATTTCATTGTTAGAAACTAATATTTTATGAGGTTATGAGTT
ATGAGGTTTTCTAAATAAGAGGTCAAAATTGGTATACCTCCTCCTTTTAG
ATTCTTGAAGCAACTTCCAAGGCGTATGTTATATCTCCTTCTTTTGGATT
CTTGAAACTACTTCTCTTAGAAGTCTTGAATATTTCAATTATGTTATGAT
GATTCTGAACGTGTACATGTTTTGTATTTTTTCCAGCGAGTTGAATTTGA
AAGTTGTGTTGATCAACACGAAGAAAAGTCGAAGTACGAAAGCTCTGGTG
ACTGGTGTCCGACAACGAAATGATAAGGTATCTCTACAACGTATTGTTTT
GTTTTTAATTTCTGCTCCCTTTATCCATACGGTATCATGGGGAAACCACT
CTCAAGGAAAATACACGTTTTATTTTTTATTTATACCCAGTTTATAAGAA
TGTATAGGCTGAAATTTTGAAAAAGTTTAAGAACATCATAAAAATATGCC
CAGTCTGAAAATCGGATAACTTGACGAAATTCGCTTAAAAATATTAATAA
GTTTTTAAGGAAATTTGTAGTTATTACTGTAACTATTCTTCTCACCTAAA
AAATAAGAGTATAAATTTACTCGATTTTTAAGCCGATTAGGGTTAAGTTT
GGTTAGGTTTTATTACATTTTACGTGTACTGTTATTACGCTGACTTGGAC
TCCACATTGTAGCAAAAAAGAGTGCACACTTATAGAGAATGGACATTTGT
TTGATTGAATTTGTGTATCAATTCCAAGTTCGGAAACGCATTAATTTTGT
TTTGAGACCAAATCGTTTCGGAACCTACGTTTCTCTTCCACTGGATTATT
ATATTCGCTCTTTCTCGCTCTCTTATGAAACTTGATATCAACGTTTGGAC
TTTTGAATGAAAATACCGGGTGATTCACCAAAAATCTCGGCTGGGTTGAG
TAATGTCAGGAATGAGAAAGTAGATAAACTTGAGATTTTAATTTTTAAAT
TGAGCTCAATTTTACCCCTTATTATTTGCTTTTTAAGTTAAAATTCGCTC
GTTGAAAATTGAAATTGAAAACTTGAGAAATTAAATTTTCAAAGTGTTAC
AATTTCAATATATTTAAAGATTCGAAATGTTTTTACAAATGTAAAAGAAG
TATAGAAAACGAAAGAGGGAAATCAGGTCACTGAAAAATGTGTTACGCTG
AATTGGTACCAAGTTCATAAAAATGACTGGCGGGAATGACTTGTATCAGA
ATTTAGCCTGGTAACGGATTTTCGTGAAAAGTGTTAGGGTTGTGTGGGAG
TGTATTTAGTCTTGATGAGGAATAAGCACGTTCGTAGCGGTAATATATTT
TTACCGCAGTCAGCTTACACTGGCTCCTTCTACTATTGACAGTTGATATT
ATTTGAATTCGATTTTTCAATCTTTTATGAATTTTAATTGACAAACAATC
TGAATGCAAGTGTTCAATATGGTTTATTCTAATAGAAAAAGCTCAGCCAG
TACGTGACTGTCCCCCGCCTTATTCATCAAATTTCTATAAAAAGGGAATC
TAAATTATAAAGTAGTTTAGCTCAAGTGATGCGAACTCATACAAAGATTT
TTTGGCAAAAATAAGAATCTCCAATTAAAGTAACAACTCACGCGAAAAAT
TCAGCTTACATTACGAGCAAAATGGTGGAGGCGAACAAATTTATTTCTCC
TCTCATAGCTTTCAACATTTTGATTTGTCTTTTCGGAGTCGTTGGAAACA
CACTCGTTATCTTCTTCTTCAAATTCAAAAATAAATCAACGAAACCAAAT
TGTCGTTTTTTGCTGATTACATTCGCTACAAGTGACTTACTAGCATCAAT
CTACAATACTTTGTTTTATGGTATACCACACCTTTTACAGCAAAAGGACT
TCGATTGGTACCTTGGTGAATTTCTTTGCCGAAACTCTAATATCATTGCG
ATGTCTCTAACATTTATTTCAAGTGGCATTCTTTGTATTATGGTTTGCGT
AAGATATCGGCAATTGGCAAATCCGTTTGCGAAACCTTTGAAACGACGTA
CGTTGGCTTTGATTTGTTGCATTGCAGTCATTGTAATTTTTGCAAGCTCG
GTGCTCTTTCAAGAGCGACCTATTTTGGTTGACGGGAGATGCCTATCAAA
TTTTGCCCAAGATTATCACATAAACGATACATCTTTACGACGAGTGTTTT
ACCGTGAGACTGGAACCAAAGCAATTCTAACATTGTTTTTCCAAATTTGC
ATACCATCCTTTCTCATTTTATTCATGACGTATAAAACATCCAAAATTAT
TCGAAAACGTAATCGAATTGATCTTGTTGCCGGCTCTAAACTCAATATCG
GTGCAATGAACAAACAAACTGACAGGTTGATCTGGATGACGGTCAAAATA
TGCTCCAGCATCATTATCCAGCCAGCAATCTTCTTATTGGTGAAAGGGAT
TCTAATGCTTTGTGCACCCTCATTCATTGACCGTCATTATAAAGCATTGA
CCATTTTGACATTATTCTCCTTTCTCGTATTTCAATTCAAGTCAATCGCT
CATTGCTTTTTAAATGCTGGACTGAGGAAATTTGTTAAAAATGTTTTCAT
CAATGGTTCGATCGAATAAAGGTTTGGTTGTTATGTCTTAAGATATATTT
GACAATCCTGCTCAACATTTTTTTCAGACTGTATAAACCAATGGATGGCT
TAGCTTTTTTTGTATTTTTGTCTTTTTGCGCCCGTCAAAGGCGCCTTAAT
GAGTAGTACCTAAGGAAAATCTCAGAAAAATTCGTTCTCGGAAATCTTGC
CTCAATTGTTCAATTTCATCAAATAGCTTTTTTGCGTGAATATCTCGAAG
AGGTGAGTCAAGCTTTCGTCTCGATTGTTTTACGAAGCAATTCGTCTCGA
TTGTTTTACGAGGCATTGCTAGGAAATGCCTCGATTGACAAACAAGCATC
CTCTGACTAAGTTTTGATACCTGTCAATCAACGTCAATCATATATCGACC
AATCATATTAATTTTCTTAGATTCTTTTTCTGTTTTTCTGTAGTAATTGT
AAACTTTAAAAACGTTATAACCATTATTTTTTTTGGGTGATAAAAGAGAA
GAGAGAAAAAAAATCATAGCCCCGAGTGGGATTTGAACCACCACTAAAGG
TAGATTTTCGGAATCGGACGCCAGCGCTTTATACATTGAGCCACCGACTC
ACACCGAAAGTTGAAATCCGTAACAACTGATTGCAATGCAAACTGACAAA
TCTCTATAATAGGGTAAAACCTGTGATAAGGAGTCTCCCAATTATTAATT
CTTAAGAAAATTTTCTGCTTTCAAAGTAGAAGTCCTTTATTTTCCTCTAA
ACAGCCTGATTTTAGCCTATACTGTATTTGCGTTAAAATTCTATTATAAT
GTCACGTGACTTAGATAACATTTCCTACCTACAGCTAGATTTGACCTTCG
GCTGGCTGACACGCCATTGGTCTAAATATCAGATAACTATCGCCCTTCCG
CGATAAAAGTCAATTCCTCCCCCTTCTACATTTTTACTTTCAACAGGATT
TTTTTCCTGGTTTAGAAAGGGTAAAGGTCGATCGTCGCCTGGAAACTCAC
ATCAACGGGCGCATCATGGCTTGGCTATTGGCTAGTTATGACTGAGAATG
TTTTAAAAATTTCGTAATATAAATCAGAACACAAAGATCTTTCTTCATTC
TGGCTATCTATCTGTCTGCTTGTCCGTGTGAAAAATTTCGGGGCAGCTTG
AGGATCAAAAAAAAGTGTCAGATTTAAAGAAAAAATATTTTTTCGTTTTC
TGGGACTACTTTCTCCCCAAAATTATATTAGTGGCGCCCAGTCTCTTTTT
CGTATTCGAGTGTTTGGAAGAGAAGGTTCCTATTTAACAGTGTCCCTTTT
CGACCCAGTGCGAAATCTCGGCGTTAAGAATTTTGGGTCGCTAAGATAAC
ACCAACTACAAAAATCGAACTGCATTCAAAAAGAATATCACTCGAATGTA
GACATTTAAAACAATGTATGAACTGAAGAATGATCAAATTGTCGGTAACT
GTTGACTGCTTGTCCGATGGTGAAACCCGTTGTCCGGGGGAGGGGTTAAG
AAAAATCATTGCCATATAATAATTTTTCTTTTGACTCAATTAGACACCCT
TAGAGTATTTATAGTTAAAAGAAGTACGATATGGAAGAATATGGGTTTGG
GTGTATACAAAAAATTACTGAAAACCCTTTTAGTCCTCATAATTGTTTGG
TATTTAATGCTGACCTCCTGGCCACACCAGTCTGTTGAATGTTGATATAA
CACGTGACCTTCACTCGTTTTCCCACACACCGTTGATGCTAAATTACCAG
GTGTCTAAAATGCCGAACGGACGGAGGGTTGTGACCAAAAATTATTTACA
CCACTTCAGGGGGGTGGATTGGCAGAGTAGCGGAATTTACTTTTTTTTGC
CACTCTCGTAGACGGAAACTTAGGCTGTTTTCGTCTGGAAATACCGAATT
TGGCATGGCGTTCTAAATCTTAATGTAAATAGATTTAGAACGCCATGAAA
TTTGGCAACAATCGGTCGTTGGAATTTTTGAATTGGAATCAAATAGCCGA
AATTTCGGACAAAAAAAGCTCCAAAACTTAACTTTTGAAATAGCCCGAAT
TTAGTCTATATTGCCTTTTTTTAGGGGTATTCCCCTTTATTCCATTCCTA
TCGGTTTATTGGGCACCTTATAGCCATTAGAATCGGTAACATCTTTGGTG
GGGCGCAACAACATGTCATTGGTTCGAGAGTAGACAGCACTATTTTGAGA
CTTTTTGAAAGGGGGCCCGTGCATTAGGCCTGGCAAAAGTTTTATGGGCA
AAAAACTTACGTTACAGGTTACAGGCAAAACTCCTAACCTCAAGAATAGA
CACAAAGTTGACCTTTTTATACCATTCAATGAATGAAGTTCTGAGCGAAA
AGTTTATTAGAATACGATTGACATTAGCCTGGAAAGCTAAGCTAGTTTGA
TTCAGTCACTAGGATAAATCTGATGTTAAGTTTTGACTGAATAACTGATA
TTCCAAGGCAAACTTTAAAACCGGAAATACGAAAAAATCTTTAAAGCGCT
GAAAACGCTATATTGTCATTGCCGTGTGTGAATACGGGCTTAGTTAACAA
GGCTAGATTGACACGTCAAATTTTGTCCTAAACTTAAATGACCCCTACTA
CAACAGTTCTCAATTTGTTAGAAAGGAGTTAAGGGGAACGAAAGCAGTTC
AACTAGACTAAATAAAGGGGGGGGGGTCGGGCGCAAATAGTCAATAGTCA
AAATTTCCGGATTGTTTTTTAAAGTTTGAATTAAGGTTCATGTATATAAA
TGAAAAGTAGAATTGAAATGTTTTGAAATTACAATTTTATTATATTACAA
AACAATTTATCCTTTGACATCGACCAATCATTTCTTGTTCTTCACTGGTT
CGTTGAGATGAACAAATTGGATTCATGAAACCTATAAGAGAATTGTGGAA
AATATCAATTTATGAATTGTACTGATCCTTATATCTACCTACGGAGGTCT
CAAAAATTATTACCATAACGGTCTTGTATTATTGGCCCCATTTTGAAAGA
AAACAATGATTTTGATATGATTCCCAGGCTTTGCACCCTTTTTCCTTTGT
TTTCTTGTTCGACCTTGATTTACAATTTTTATTTTCACCCCTTAATTTGA
AAATACCACCTACGAACTTAGTCCATTTGGTTTAATAATGAATAAAGTAC
ACAGGGAGATAACCATTGTCGGTTCACTTTCAGTTGTCGATTAAAATGAA
AAAAGAAAACATGGCTATGCCGAAACAAAAACATATTCATTACCTTTCAT
TTTTTATCTTCATTTATGTTTTTCTTCGAAACTTCATCTCTACGAAGATG
GGGTCCATGTCAATTTGGCCATCATCCCAAGTGATTTCTGCATATAACGT
GCTGCCTTTAGTGAAATTGTATTTGCCAGTCAGGAGAGTGTCATAGCAAT
AATTATACCACCAACCTGAGCCGTATGCTTTTGCACAACTCCCACCGTGT
GCGGATGAATCGGGAGGCATTGTGTCATTATCAGAATCGAATGTTGAAAA
CTTCATTCCATTGTGCTTGTTGCCAAAAGTATTTGGTTTTGAAACATTTC
CAGAAGCTCCAGAGATTGTCAACATATATTTGCTTGCTTCATCACCGACT
TCAAAAATATCGTATTTTGCATAAACCATTTTTGTTTGTCCAACCATGAT
CATGTTAATCAAAAGTTCGGATTTCTTTGGTGCAACTTCTGGCTTTGTCA
AGTCATGGACATTCTCATTCCCAAACCAAAATTCACCAGTTAACTTTCCA
AAACCAAGTTTATAGTCATTCCAGTTGCGAGTAAAGTTAACAGAGCCGTC
AGTCCTTCTNCAAGTCATGGACATTCTCATTCCCAAACCAAAATTCACCA
GTTAACTTTCCAAAACCAAGTTTATAGTCATTCCAGTTGCGAGTAAAGTT
AACAGAGCCGTTAGTCCTTCTAAGAAACGTTGTCCAGCCGCCGTTGTCCG
TGGTCTGATCGCAATAAGTATTCAGTACACTGAAACGATGTCCGTGCAGT
CGATAAATTCCATTGATTTTATAGCCAGCCTGGTAAAACTCCAAGCAATC
CTGTCTGGGTTGAATTTCAGTGCAGTCACAATATTTACTGTCTTTGACAG
ATTTGCAGGGAGCACATTTTCCATGAAGACCTCTCAAGAATGTAACTTGA
TTTTTCAGTGTTTGGTAATCAGCTGTCAGCTTTTGGTTGGATTGCCTTAG
AGCTTCTACACTTTGTTTGAGATTTGCCAGAGATTGATCCAACAAATTAC
CAACGCTCTTGGAAGATGCACTTGAGGTTGCACCAATACCAACCAAGTAT
TGGAGATAGAATGTCAAGACAAGAATCTTCATTATTAGTGAAGCTTTTCC
CAAATCTTTTGTATAGTCTTTTTCCTCTTCTTACTTTATTTTTAAAATCC
TTTGACCATAATTTGTTGGTGCTTCTCCGTCTTTTATGACTTTTATCGTC
CTTTCGTCTTTGTCTGATCAAACTGTCTCGTCCTCTCCACTTTTATTTGT
TGAACAGAGACAAGAACTTTGTTTGACTTTCACTTTGATCAGGTCTCTTC
TTTCATTGCAGCAATTTCAAATATTGTACATACATTTTAATAAGCAAAAG
CAAGTTGTTTTTCTAAGCACGCGTTTGGATAAAAACAATTTCTTTTTCCT
GGAGCATCACGCAAATATTGATAGATGTGTTGTAAGAAAATCCAATCAAA
TATAGTCTTTTTGCGTCAATATTATTAGATTCAGCTTTTGAAATATTTGG
ATAAAATTACCTCTTTACTTTTTATTTATTGTCAAACAAGTCGAGGTTGC
TCAACCAAAGGCCATTTCATTGGAAGTGTTCTTCGGAGTAAAATCGTTCA
GAAATCAATACCACTACTAGGTTTAAATTGAAAAAAATGGCCAATTTTAA
ACTAACCTATCTAACGCTGGCCCTTTTCCGCTGCAGACCCCAACACATTC
CGTAAGGACTGGCGTAATGAAACTAATAAAGTAGCAGAAAGCTTTCACCT
ATCTTCTAAATCTGTGAAATGTAACCTTCTATTGTAGTTGGGACTTAAAA
CGTTCAAAATATACTAATTGAGATCAAAATTGTCCAGAAAAACCGAAAGT
ACTAAGGTCTGCCTAAAAAGTCTATTGACATTTTTTTACCCTTTCTCAGC
AACCATTCATGCTATGTTAGAAAGCTATACACAGTTGGAAAGATATTTCC
AAGGATGATAATCTAAAAGATAATATATTTTTGAAAAATTGAAAAATGAA
GAAAAAAATATTAAAATAAAGAGGAAGATTTTTTTCTACTGGTTCAAAAA
TTGTGACATAGGCTATTTATAAAATTTAAACCTTGCTGATTCCAAATATG
ATACCAAATTGTTCAGATTTTTGGTATCTTTCTTGGATAAAAAGTTACAT
CCCTTTGAAGTAGGACTAAAACGGCCAAAAATGATCAAAAACAGCAAAAG
CGACCTAGTTCACAGTGCTGTAACTTTTTTTTCTAGTATTTGATCAATTG
AATCACGGTTCAGCACCTGAATTGCAATTTCACAGTTCCAGTAAGTTGTG
AGCAAGGGGTCAATGTTTGTGCGTTTTAAGGTGTTATAGTTGCCACCGAG
CGGAGCGCAGCGGAGCGTAGGTGCCCCCCCCCCCAATAAGAAAATGCTTC
CTACGGCACTGGTATCAATAATCTAATTAGAAATATTAGTAACTTTGCAG
CGAATCACTGCTCAAAATTTGAGACCAAAAGGACTATTTTATAAAAAGTT
TTTCGAGGAAAATATTTTGTAGTTTTTAAGAGGTAAATAGCTAAAAAAAA
GGCCATTTTTCACTTACTCGTGACAAACTGAAAACTGGTTTCTACAAAAC
ATCACCGCCAGGGAAGAAAACCATAAACAGCGTACTTTCAACCCAATAAA
GTTTCAGCCCTAAATTTTCAGATTGAGGGTATCGCTATGTTTTTGTAGGT
TTTAAGGGGTATCCACTGTTATTGCCGACCCAGAAAATCTCAGCGTTTTG
ATTGGTCGAGAGCATCGAGATATTTGCGATATTTTATATTTCTCTAGTAT
AAAAATATGACCGCGTTGACTTTTGGGGGACTGGGTAAGCGGTAGACTAG
TAAACTAGTCGGTTATTACTTATAACCTTATAATAAAACTGTCAATCAAA
TAATGTAAACACTAATTAAATATTCAGCGCGCGTGAGAGANNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGAGGGAAGAAGCTTCTAGTCGTTGAAATTCAGA
AAAGACACGCAACCTCACCTCTTCGATTCTTTTTATTTGGAGCTTGATTT
TTTTGTATATGGGTCTGTTTTCAACGACTAGTTTACTAGTCTACTTAAAA
TATACCTAATTTGCGAAAGTTTATGCTCGCGAAAAATTTTTTTCGTCTTA
TTCGCGAAAGTAAATGTCGTAGATTTCGCGATTTTTTGACCTCGCGAAAT
TTTCTGCTCGCAAAAGTTTGTACGCCTAAAGTAAATTTTTCTTTTGCTTG
AAAAAAATGGCTTGTCAAAGCTGAAAGCCTGTGTTATAAGATCAACATAA
TTTGAAAGATTCTCATAAATGGTGAAAATAAGAACATGTTAAGAACATTT
TTATAACGTGATGGTAACGAGGCTATCATAGCTTTTTACAAAAATACAAA
AAAAACATTGACGTCCGGTCTTTTATATATTCATGTTTAGGCATTTTGTT
CAAAATGCGAAACAAAGGCTTTCTTTAAATACTACAAAAATCGAGCTTCT
CACTATGGTCAGGAACAGGAACAGTTGAAGCTTCGTTATGCATAGTGTTC
TTTCATGTTTCTCAAGTAAAAGAAGAGTTTCTAATTATTTTGCCCTAAAT
AGCCCATTTTCGTCTAAATTGTTTTAAGCTATTTATCCCAGCACGTCTCA
GTTATTAGGTCTTTAAGAGTACTTAATTTTTTCAAGGGGAAGGGAGGGGA
AAGAAATTCAACTAGACTGTTTTTTAAAGTTTGAATTAAGGTTCATGTAA
ATGAAAAGTAGAATTTAAAATGTTTTGAAATTACAATTTTAAGATATTAC
AAAACAATTTACCAATCATTTCTTGTTCTTCACTGATTCCGTTGAGATGA
ACAAATTGGATTCATGAAACCTATAAGAGAATTGTGGAAAATATCAATTT
ATGAATTGTACTGATCCTTATATCTACCTACGGAGGTCTCAAAACTTATT
ACCATAACGGGCTTGTATAATCGGCTACATTTTGAAAGAAAATAATGATT
TTGATGCAATTTCCAACACCCTTTTTACACTCTCAATTTCCCTTTGTTTT
TTTGTTCGCCCTTGATTTACAATTTTTATTTTGACCCCTTAATTTGAAAA
TACCAACTACCAGCTTGTCCATTAGTACATGGTTTAATGGTAATGAATAA
AGTCTACAGGGAGATAATCATCGTCTTCTTGTCGGTTCACTTTCAGTTAT
CGATCAAGATGAAAAAAGAAAACGATTTCTTGTACAGCTAGAAACATGTA
AACATGGCTATGTAGAAAGAAAAACATATTCATTACCTTTCATTTACCTT
GATTTATAACTTTCTTCGAAACTTCATCTCTACGAAGACGGGATCCATGT
CAATTTGCTGGTCATCCCAAGTGATTTCTCCATCTATCGTTTTGCCTTTA
GTGAATTTGTATTCGCCAGTCAGGAGAGTATAATAACAATGCCCATACCA
CCAACCTTTGCCGTATGCTTTTGCACAACTTCCATCTTCTGAAGATGAAT
TAGGAGTCCATCTGTCGTTATCAGCGTCCAGAGTCGAAAACTTCTTTCCA
TTGTGATAATCAAATCGATTTGTGGTAACATTTCCAGAAGCTCCAGTGAT
TGTCAACACATATTTGCTTGCTTCATCACCGACTTCAAAAATATCATATT
TTGCATAAACCATTTTTGTTTGTCCAACCATGATCATGTTAATCAAAAGT
TCGGATTTCTTTGGTGCAACTTCCGGCTTTGTCAAGTCATGAACATTCTC
ATTCCCAAACCAAAATTCACCGGTTAACTTTCCAAAACCAAGTTTATAGT
CATTCCAGTTGCGAGTAAAGTCAACAGAGCCGTCAGTCCTTCTCAAAAAC
GTTATCCAGCCGCCGTTGTCCGTGGTCTGATCGCAAAAAACATTCAGTAC
ACCGAAACGAGATCCGTGCAGTCGATAAATTCCACTGATTTTATAGCCAG
CCTGGTAAAACTCCAAGCAATTCTGTCTGGGTTGAATTTCAGTGCAATCA
CAGTATTTGTTATCACCAAAAGATCTGCAGGGACCACACTTAGGGTGAAG
TTTTTTCAAGAACGCAACTTGATTTTTAAGTGTTTGGTAATCAGCTGTCA
GCTTTCGATTGGATTGCTTTAGAGCTTCTACGCTTTGTTTGAGATTTGCC
AGAGAATGATCCAACAAATTACCCACGCTCTTGGAAGACGCACTTGACGT
TGCACCAATACAAACCAAGTATTGGAGATAGAATATCAAGACAAAAATCT
CCATTCTCCTCGTAAAGGAATTCTTCGCTTATGTCTGACGAATTTCGTTT
CGATCGAAAGTGTATCTTACTAAACTTCTTTCTCAATGATTTATACTTTT
AGGATGTCCTAATTGAACCGGGGGTCTTTGTTTTTTAATTTACGGCTACT
TCTCGGAAAAAACTTCGTCGATGATAAGAATATAGCCTGCAGAATGAATA
GATCGATACCCCTGGATTTTCTTAGGTTTTATATTCTAACAGGAGTTCCA
ACACATATTGCAGACCAAATAGTTAATATTGATTTCAAATGTTAGTATGT
TTATACCATAAAATAGAGCTGATTTAATCTGAAGCCGTTATATGGCATTT
ATAGTAAAACTAGCTTCTTGGAACTCTAGCTTTTAGACTATATAAATATC
CACCAATGAAATTAATTTTTGTAAAAATGCCAAGCTCGACCTGTCGTAGT
ATAGTTGTACAGTTTTTAAATATTAGAATCACCAATCATGTCAGCTTTTT
AAAATTAATTTATTTAATATTTACTAGACTTTCTTTCTTCCATCCAGACT
AAAAAATGAAAACGAAATTACAAAATAAAAAATACTAGATCACAGTGTGG
ATGTAAACCACACTGAAACGACCGCCTTCCATCACGCATCAGGCTCGCGA
AAGAGCGTGCGCACATTATTAACGCCTACATGTCATCTCCAGTACATTTT
AGATTATTCATTGAAAACAGATTACAATATAGTCATTTTTCATGTCTCGA
CTATTCAATTCCGAATAAAAGGCATTCAGGGGAAAAAAAAGTGAAACACC
TGGGTAATCTAGTTAAAAAAACGAAAAGTAATGAGCCAAGGCAAAACGAG
ATTAGCGTACCAGTATGAAAGAAACCGCCTCTGGCGGTCGATAAATTGCT
AAATACACTAAAAGACAACATGACTGACTCGAGAGCAAAAATGAGTATAG
GTTTAAAGTATGGGATACCTAAATCGTTTCACAGTAGATAATCCTGAACA
GTGCTGTGAACCGGCTGGGACGTCTCGATCGTAAGACGATAAAAAAGTCG
ACATTCTTTCGATTTTCAACATTTTTGAAAGTAATTTTTTATTCAATTGT
AGTACGATGGCTCTGAAAGCGATTTTATTTTATTGTTCAAGATTTCTCCT
TTCTTTTTGATGAGAAGGAGAAGTGCAATTTATAAAGGTGAAAGTTCTAT
TTTTAACCAAAAATTGAAATTTTTCTCCTTTTAAAAATCAAAAGTTGAAA
TTTTTCATTTCGCCGCCGAAAGTTTAAAAGTTTAACCCTATTCGGCCTAG
GGGGGGGGGCTGTTTCTGTTCGGAGGTCAAATTATTGGTAATAACTCCTG
ATGAAAGCTTTTGCCATAAAATTTTCTGTAAATTTCTAACTTTTATTTGC
CTTCAAAATAAAATAAAATTTGACACCTAAAAATTTTCACACCTTGAGCA
TGATGACATTTTTTACAGTAAGGTGTCACAAAAATTGACACTTTTCCAAT
ACAAAGTTATTTTTAATGTCAAATATATCGTTTAAACCGTAATTTATTGA
TTATTTAGGATAAAATAAGCATTTTAAACTCAGGCAACTTTTTTAAAGCC
TTTGTTAGAATACAATAGCTATTTATAAGAACAAAGGAAACTTTCGGTTT
TTTCTCACTTTGGGCATGATGAGTGACGTCATCAAAAAATTTTTTTGTCA
AAAGTTACCTTATGTGACAAGGATCTTTTGTGCCAAATTTCATCCAAAAA
GACCTACTAGATCAAAAGTTAAGGGGTGGCACAGGAAAGCCCCCCCCCCC
CCCAGTTCTGAACCGCCCCTAAAAGCCTAGGATGAATTAAAACATGCACG
TGTGTCTGTTGAGCCTTTTGCGCCATAGAGAGCCTAGACAGTTCCAGTTC
ACAAATTTTATAAGAACACTGGGAGTGTCTCGTGAGCCTTATGGGCCACC
GTAATATAGTGCCCAACAGCACCTCCCCGCACCCATTTTCGCCTAAGTGC
TCCATCCCAGTACAGAGTTTTTTAACCAACACAGGAAAAAAAAAGGCGGT
GAACAAAAAGCCTCGATTTCTTGATGGACTTGCGACCTGGGAAAAATTAT
CGCCTATAACTTTTTAACCAAGATGAATATTAAATGAGCTTTTAAATGCG
GCACGATTCAGAGCAAAAGAATCGCGAAAAAGTCAAGTAAACATAAGCAT
TAGAACCCCGCCGCTTCCCCTTTCAGGAAAAAAGCAACGTGATTTTGTTT
TGGCTGAAGGCGGTTTTTGAATCGATAAATTCACTGCACCTCTTTAGAGA
ATAGCGTGGTGTGCGTAGAATAGACTATCTGTAATGAGATTATGTGTTTA
TAAATTCGTTTAATGCCAAATCGATTATTTACATTAAACAATTGCTTAAG
GTTCTTTGAGCTGTATTTGTCAATCTTTATTTTTCAGTATCCGAAGATCT
ATCCTCATATTATGGATACGATCGAACAAGTCACAGAAAAATTCAAACAC
AATTTGATGGAGCTTTCAAGTGGTAAGTAGATGAATTTTGTGCAAACAAA
TATATTTTTGATACGTGGACTTTGCAATACTGATTGATTTTGAAGGTGAT
AAATTGTTGAAGTTTTTTAATGTGATTTTCATATATTTTACTTGACAAAT
CAGGTTCAGTGACGTCTTGGCGGGTATCTATTTTACATTCATAAAGTTAT
TGACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035757XLOC_035757Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056771-exon-scaffold_282-1575043694:189521..189663TCONS_00056771-exon-scaffold_282-1575043694:189521..189663Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1575043694:188687..188846TCONS_00056771-exon-scaffold_282-1575043694:188687..188846Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1575043694:188297..188450TCONS_00056771-exon-scaffold_282-1575043694:188297..188450Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1575043694:187455..187693TCONS_00056771-exon-scaffold_282-1575043694:187455..187693Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1575043694:187194..187245TCONS_00056771-exon-scaffold_282-1575043694:187194..187245Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1575043694:186587..186677TCONS_00056771-exon-scaffold_282-1575043694:186587..186677Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1575043694:172942..173026TCONS_00056771-exon-scaffold_282-1575043694:172942..173026Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1575043694:172759..172810TCONS_00056771-exon-scaffold_282-1575043694:172759..172810Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:189521..189663TCONS_00056771-exon-scaffold_282-1510915933:189521..189663Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:188687..188846TCONS_00056771-exon-scaffold_282-1510915933:188687..188846Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:188297..188450TCONS_00056771-exon-scaffold_282-1510915933:188297..188450Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:187455..187693TCONS_00056771-exon-scaffold_282-1510915933:187455..187693Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:187194..187245TCONS_00056771-exon-scaffold_282-1510915933:187194..187245Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:186587..186677TCONS_00056771-exon-scaffold_282-1510915933:186587..186677Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:172942..173026TCONS_00056771-exon-scaffold_282-1510915933:172942..173026Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1510915933:172759..172810TCONS_00056771-exon-scaffold_282-1510915933:172759..172810Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:189521..189663TCONS_00056771-exon-scaffold_282-1491911889:189521..189663Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:188687..188846TCONS_00056771-exon-scaffold_282-1491911889:188687..188846Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:188297..188450TCONS_00056771-exon-scaffold_282-1491911889:188297..188450Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:187455..187693TCONS_00056771-exon-scaffold_282-1491911889:187455..187693Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:187194..187245TCONS_00056771-exon-scaffold_282-1491911889:187194..187245Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:186587..186677TCONS_00056771-exon-scaffold_282-1491911889:186587..186677Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:172942..173026TCONS_00056771-exon-scaffold_282-1491911889:172942..173026Clytia hemisphaericaexon
TCONS_00056771-exon-scaffold_282-1491911889:172759..172810TCONS_00056771-exon-scaffold_282-1491911889:172759..172810Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_282supercontigscaffold_282:172759..189663 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	1.4697	2.32901	0.0639544	0	0.330601	8.23883e-07	0	1.84394	3.60909	2.39903	5.21387	0	0	3.5475	4.30475	6.48041	5.08809	0	0	0.969662	1.48198	0	1.14073e-06	1.04598	1.56831	0.548346	0	1.46787	0
Blast
[Close]
BLAST of TCONS_00056771 vs. Swiss-Prot (Human)
Match: KIME (Mevalonate kinase OS=Homo sapiens GN=MVK PE=1 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 3.883e-42
Identity = 98/285 (34.39%), Postives = 165/285 (57.89%), Query Frame = 3 
Query:   81 IVTSAPGKIILCGEHAVVYGKEALAFSLSTTTQCCLKENMNNPSQIRIKVPDLQIDETYNGEDLEKAYGDSLQKGSGDVQTCQLFENEEDIYERLLSPEIDGTKKAALKLILVLYMHLAHSQTTPRKIGLCISFKSDLPIGAGLGXXXXXXXXXXXXMLVYTGVLPSNQSD------WTEKDYEVINGWAYQSERIVHGTPSGIDNSISTYGQCVSFKSKKIERLKNFSELNLKVVLINTKKSRSTKALVTGVRQRNDKYPKIYPHIMDTIEQVTEKFKHNLMEL 917
            ++ SAPGK+IL GEHAVV+GK ALA SL+  T   L+ + N   ++ + +P++ I   ++   L+      L++G     T +  E  +++    L  +   T++ A+   L LY+ +   Q     + + +   S+LP GAGLGSSA+++V   +A+L     +P+   D      WT++D E+IN WA+Q ER++HG PSG+DN++ST+G  + +   KI  LK      L+++L NTK  R+T+ALV GVR R  K+P+I   ++ +I+ ++ + +  L E+
Sbjct:    6 LLVSAPGKVILHGEHAVVHGKVALAVSLNLRTFLRLQPHSNG--KVDLSLPNIGIKRAWDVARLQSLDTSFLEQGDVTTPTSEQVEKLKEVAG--LPDDCAVTERLAVLAFLYLYLSICRKQRALPSLDIVV--WSELPPGAGLGSSAAYSVCLAAALLTVCEEIPNPLKDGDCVNRWTKEDLELINKWAFQGERMIHGNPSGVDNAVSTWGGALRYHQGKISSLKRSPA--LQILLTNTKVPRNTRALVAGVRNRLLKFPEIVAPLLTSIDAISLECERVLGEM 282
The following BLAST results are available for this feature:
BLAST of TCONS_00056771 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
KIME3.883e-4234.39Mevalonate kinase OS=Homo sapiens GN=MVK PE=1 SV=1[more]
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