TCONS_00056719 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056719
Unique NameTCONS_00056719
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length259

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056719 ID=TCONS_00056719|Name=TCONS_00056719|organism=Clytia hemisphaerica|type=transcript|length=259bp
aagtttgaaaaaaaaattctactgtGGTATAATAccgtggtatatcagga
attattcaatggctgtttttgcctacgggTATATAATAATACTATATATA
CTATAATATACCTTAGCATTCGCGATGCGATCGATGATTGCGTAGAACGT
TTCATGTGGATAACATTTGTGAATACCTTCCACCCTGACTTGACGGTAAG
ACAGTGCTTCTGATACGGTTATGTCCAAATTATTGTATGTCCTTTCGGCT
GCCAAGTTC
Run BLAST on NCBI

transcript from alignment at scaffold_281:422728..422986

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056719 ID=TCONS_00056719|Name=TCONS_00056719|organism=Clytia hemisphaerica|type=transcript|length=259bp|location=Sequence derived from alignment at scaffold_281:422728..422986 (Clytia hemisphaerica)
GAACTTGGCAGCCGAAAGGACATACAATAATTTGGACATAACCGTATCAG
AAGCACTGTCTTACCGTCAAGTCAGGGTGGAAGGTATTCACAAATGTTAT
CCACATGAAACGTTCTACGCAATCATCGATCGCATCGCGAATGCTAAGGT
ATATTATAGTATATATAGTATTATTATATAcccgtaggcaaaaacagcca
ttgaataattcctgatataccacggTATTATACCacagtagaattttttt
ttcaaactt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035736XLOC_035736Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056719-exon-scaffold_281-1491911889:422728..422986TCONS_00056719-exon-scaffold_281-1491911889:422728..422986Clytia hemisphaericaexon
TCONS_00056719-exon-scaffold_281-1510915933:422728..422986TCONS_00056719-exon-scaffold_281-1510915933:422728..422986Clytia hemisphaericaexon
TCONS_00056719-exon-scaffold_281-1575043694:422728..422986TCONS_00056719-exon-scaffold_281-1575043694:422728..422986Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_281supercontigscaffold_281:422728..422986 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
8.22353	1.6013	4.46327	5.06658	3.30328	0.710288	0.185915	0.947186	8.57439	7.20377	5.82204	9.72596	5.58427	8.55214	7.09809	9.70451	2.34525	9.75896	5.41601	8.51191	7.8944	6.74441	13.7433	6.55883	0	0.447548	12.3145	13.1022	10.3217	9.6502
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056719 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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