TCONS_00056513 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056513
Unique NameTCONS_00056513
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1032

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056513 ID=TCONS_00056513|Name=TCONS_00056513|organism=Clytia hemisphaerica|type=transcript|length=1032bp
TCTTTTCCAGCACCGCCGACCATCCCGACCACCCCGACCTCATCTTCGAC
ACACGATAGTGATTCTGTAGAAGACATTAAGGTCCACATGCAGCTCCTTC
AAAAGAGTGCTGCCTCACAGTTCAGTAAAGCCAACAAGGAGTTTAGTAAA
CAATGCACCAACAAACTGGATCAGTTCGTTAAAGATGTCGGCTCAGTGGC
TAACGAGAAAGAGGAGAGAACAACACAAATCCTCTCTAACATAGTCAACA
ACACCATCGCCATGAAACTTGAGAAAACGATACGAACTGAAATGAAACAA
ACCGTCTTGGCTGGCATGGAGAAGATGACTGCCAAATATTTCGAGAGCTT
GAATAACCAAGTGGCTCAGaaaatttcacTTTGGGAAAGAACGTTGCGCG
AAGAATGTGCTGAGCTGGTCAAAAGCAAGCCTGTTGCGGAATCTATTGGT
TATGCTGCAGCCAGCATTTTGGAGGGTACCATACCGAACGCGTATCGGGA
ATCTTTCCAAAGCATTTTGTTACCAGGTTTCGAGAAAGCTTCAATGAATA
TGTTTATGCAGATTAACAGGACTTTCCAACAAGGGACAAAACAGTACCTT
GAACGCCTTGATAAACATATGGAATCGAAGAATTCAAACCAAGAGGACAC
GCAAGAGAATATTTTGACCAACCTTCACGATTTGGTGCAATCGTTCCAAG
GGACGGCCGATCGGTTGACCACTGGCGTTGAAACGAACCTCGAAGCGTTG
ATGCAGAAACAACTTCGTGATGCTACTGATAGAATGCAAACGACGTTTGG
CAAGACCATCGAATCTAAAATTATACCAAGCCTGTCTAGAACCATCTCAC
AATCAGCACAAGATTCATTCAAAGAGTTTAAGCAGACCATTGATAGCTCT
ATCAATTCCATGTTGTCTTCGGCGGCCGTAGCGGCTGCGAACTCGTCTAA
CGAAACTTTCAATGTCCATAAGACAATCGAAGAGAAAAAGACTTACATCG
AACGTTTATTCGAGGACGGGGATTACAATANC
Run BLAST on NCBI

transcript from alignment at scaffold_276:509109..524417-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056513 ID=TCONS_00056513|Name=TCONS_00056513|organism=Clytia hemisphaerica|type=transcript|length=15309bp|location=Sequence derived from alignment at scaffold_276:509109..524417- (Clytia hemisphaerica)
TCTTTTCCAGCACCGCCGACCATCCCGACCACCCCGACCTCATCTTCGAC
ACACGATAGTGATTCTGTAGAAGACATTAAGGTCCACATGCAGCTCCTTC
AAAAGAGTGCTGCCTCACAGTTCAGTAAAGCCAACAAGGAGTTTAGTAAA
CAATGCAGTATCCTTTTCCATGCTTTCCATGTTTGGAATCGTCTCTATAA
TTAATTCATGATATTCACTAGTAATTATTTCTACGGTAACACCCCGGTTT
TTGCCAGTACAGTAGTGGCAAATTTCAAAAAAAAACTTTTGACTTAAATT
TGTCACTACTGGCAAAAACTGGGGTGTAACCACGTAGAAAACTTACCTTT
TATCCTCAGATCGCTCCGTTTTCGCACTAAATCCTCATATTGCAGCAAGA
GAACTCCTATGATTGGTTTTATTCCCCTCGATTAAATACTGGGACATAAT
GATATGATATAGTGTTCGTTTAGTGGATTTGTGAGAATGGTCAATTTAGA
CTTAGTAGATTCGCTGATGGATGGTTGGGTGGACGTTTTCTGACATAATT
TGAGTTTAAGTGCGTCATCAAAGCTAGAAAAATGTTTCGAGTTTAGAGAT
GAGCTGGAGGATGATTGAGAATATTGGAAAATGCAGTTTCCAGAGTTTTC
CGCGGTTTGTTAAAGGAGAAATTTGAATTTAAAACATAATTCCTTAACCC
TAAACTCCTATGAACAACAGCCAACAAACTGGATCAGTTCGTTAAAGATG
TCGGCTCAGTGGCTAACGAGAAAGAGGAGAGAACAACACAAATCCTCTCT
AACATAGTCAACAACACCATCGCCATGAAACTTGAGAAAACGATACGAAC
TGAAATGAAACAAACCGTCTTGGCTGGCATGGAGAAGATGACTGCCAAAT
ATTTCGAGAGCTTGAATAACCAAGTGGCTCAGGTATAATAACTAAACATA
CCCGTCATTAACATTGAAAATTTATAACATTTTTCAGATGACGTTTGCAT
AGCGGTGTGCTATTGGGAATCCACCTCTGATTCTGACGACTACATTATAT
TAAAGTAAAAAAAGTAGGCATGTTAAGAACATGTTAAGAACATTTAAGCG
TAAAAGTCTCGGAAAGTTAAAAACAGCCGAGAGGCTCAGTCAAAATTATA
GAAAGAACTTGAGTTGTCAAAAATTCTTGCCTTAATTATAAAGAACTTTT
AATTTTTTTATTTCAGAAAATTTCACTTTGGGAAAGAACGTTGCGCGAAG
AATGTGCTGAGCTGGTCAAAAGCAAGGTAAGCTGGTATTTCACTCCAAAA
ATATCGTTTTAAATAGCTATGTGTTTTTTTATTTTATAAGCATAACGTTT
ATAAGCATATACAGGCTCCATTTTTGGTACCTAAACAATGGCTCTATTGT
TTGAGAACAATAGAATGCTAAGCATAATGAGCCTGATATAAGGACAGACA
CTTGCTTATAAGAAACATGTAAGTTTAATTAAAAACTGTGCTTTTCTTCA
AGGTATATTATTAACAAAAATCATTATCCCATAACTTTTTTATAACAAAA
AATATTTCAACTGTGGTCAAGTGACTTTACTTTGCTGAGAAGCTGTCCGT
GGTGAAGTACTTGGCTTGCGTGAACATGTAAATAATGCTTTAATCGAATG
TCTAAAATTCTTCATTTTTACGATGCAAATTGTCGGATTGAAAATAACGT
TAAGTGCGTACATGAAAAACCGTACGGTGCCCATCGCTTGTTTAGTCTCA
TAAGACAGTTTGTTACCTCTTGACGCGACGTACGTCTCAGTAAACGCCAT
GATGAGGAAAGTTACGAGCTCCATAACTAAGATTAACGTGAGCAGCTGTA
TCACGTTTTTACGGCGTGTTAAACGTGTGGAGATTACGCTACGACTGCTA
TCGTGCGACGCGAGTAGGTCCTCATGTTGCCTATTGTTTTCTTGTGATCT
CATAGTCATTCGAACACGAATGTAAACAGTCATTAGAATTATAATTAAGA
TTATCGAAACACCGAACACTTTTACCGCATTCAAATTTGACGTCGTCGAG
TACATGACCAAATCGGCGGAAAATACCAAAGATGAAACCCAGATAATAGC
GCTGTATACCATGTAGCGTTTAACATCCATTTTTTGTCGATGTTGAATGG
GATTCATGATGGCTTCATACCGGTCTATCGATAAACAAACGGCCGTGAAA
AAATCGCCGTATAGAAAGACACTGTTAACGGCAGACAGCTTGCGATAGTT
CGGCGCGTTTACATCACCGAAATGTACGAATACGAAATATGTACGGTACG
TAAGGAATAACAAACCGACCATTAAATCGCACGCAAATAGATGTACCAGC
AGAAAGTTCGAGATTTTCTGTAGCTTTTTGAGTGGGTCTCGGATAACGGC
GATTAGGAGTAAAGAATTTAACAGGATACATGAGAAAGCTCCTAAACCCA
TGATTGCACCTCCGATGAGTCTGAACAAGTGAAGTTCCATGACTTTTTCT
CCAGTCACTCAAACTCGTCTTCTCGTTTTTTTTCTTTATACAATTGGTAA
AAATATCGAGACTTAAAAAACTATTCCAACTGATTTATGTTCACTGCTAC
AACTATACCACAAGCTTTTCTCGACTGTGCAAAGTTTTTTGTCTGGTGTG
TTGTGTTTCTCTCCGTTTCTCTCCGTTTTTAATCCCATCCACGGTAAAGT
ATTGATTAATAATAGGTATAATTCACCAAACTGTATACAGAACAAATTAG
TTTAAATCTCCTTTCTGTGAAACTTCCTTTTTTTCCGATCAAAACATTTT
TTCTCCTTATATAAATGTTTTGGAAGGAAAAATCCCCTTAATAGTTTTAT
GCATGTGATTTATAAAATTCCTTGAAAGTGCTTGTCATAAGACCCATAAC
GTATTACACGTTTTTTTATAAGAACATCCAAAATTTATGAAACCTTGGCT
TAACTTTTTCGGTTTCATGCCTAAAAATGTTCTTAAAATGTTCTTATTTT
CACCATTTTGTGACTATTTTTACCAATTTTAACAAGAAAACGGGTGTTTT
TGAGTCCACAAAGCCTTAAGATGTTCTTAACTTATATGTAAAAAATACTT
GTAAAATACGTGTATGTTTGCAACTGAAAATCTCGCATTACATAATGTTT
ATCATGTGTCAACCAAGCTAAAACTTTCTTTTAAAGAGGATTAACAAGAA
GGTAAACAAAACTTTGTCTTTTGTATAACCAAGTATAATTATTGGCCTAT
CAAAACAAAACTGGTTTGTCTTTAAAGAGTACTTATTTGGTTAAACAATT
TTGATTGACTTTTCTATAAGAAACATTTTTGTCATAATTTTTCATCACTT
ATCATAAGAGTTTGTTCTTAACAAGTTTTAATTATGTGCTTGCTTAGCTA
TTTTGAATTGAAAGACACAAAAGACAAAAAAGACAATAGGATTTATAGGC
ATTACGTATACATGTCTTGTATAAAACATGAATATAAAAAGTTCATCCAG
ATTTTTGGATGAATATCAAATAAGCTTATGAGCGTAGTTCTCAAGCATAA
TCATTAGAACCCAGTCGCTTTTGCTTTAGTTTTCAAGCAAAAAACAACTC
GGTTTTGAATGTTTTGACTGAACAACCATATTATATTCTAAGAACTGTCT
ATTGATCGATACTTTTTACCCTGTTTTAGCCTGTTGCGGAATCTATTGGT
TATGCTGCAGCCAGCATTTTGGAGGGTACCATACCGAACGCGTATCGGGA
ATCTTTCCAAAGCATTTTGTTACCAGGTTTCGAGAAAGCTTCAATGAATA
TGTTTATGCAGATTAACAGGACTTTCCAACAAGGGACAAAACAGTGTAAG
TATTTTGTGAGTTGGTACATTGAAGTGTCTTTAACACGAACCTTCATTAC
TCGAATGTCTCCTTAACTTGAACAAGTTTTATGTTCCCTTTCCGTTCCCT
TCAGTTAGTAATGTCTTATAAACCTTACTCCATACTCAAAATTTCCTTAA
CTCGAACAAATTAGCGTTCCCCGTACGTTTTCGAGTTATGTAGACTCCAC
TCTCTAACCAATTAAGTAAAGTAAACGTCTTAAGTTAATTTCATACACAA
AGTTTCATTAGTAAAACCAGGTGTAGTGTAACAGTCATTTTTAGACGCTA
GGTCTTCGTCTGTTTAGTTTCTATGTTCATACTAAATTTTGATGCGCAAA
TTAGTTCATCGCTTCTTGGTTGATAACGATCCAAGCTTTTTCCAGATTGG
TACTTTATACACTGGAGTCTCCATAACTCGACCACGCACGTGAAACACAA
ATTTGTTCGAGTGAATTAAAATTGATGAGTAAGCAAACGATATCACTTTT
ATTTAAAAACAAAACCTTTAAGGAGACTCATCTGTAAAAGTTTCAGTCTT
CTCAAACTATGATTTCTAGGAAATACAGTTGACTCTCGCTTTTTAGAACT
CGAACGGTAATCTTATTTTGTTCCAATTACAGAGGGATTTGAATTATGAT
AAGTATTTCAAGAGGCTTTCTTCTTGACGGGGGACTGGAAATAAGTTCGA
ATTATAGAAGCATTCAAATATTAGAAGCTCGATTAAGCGAGAGTCAACAG
TACTCTATATATGCTAATTTATTTAGACCTTGAACGCCTTGATAAACATA
TGGAATCGAAGAATTCAAACCAAGAGGACACGCAAGAGAATATTTTGACC
AACCTTCACGATTTGGTGCAATCGTTCCAAGGGACGGCCGATCGGTTGAC
CACTGGCGTTGAAACGAACCTCGAAGCGTTGATGCAGAAACAACTTCGTG
ATGCTACTGATAGGTAATTGTTCTTTGTTACATTTTTGTCAACTCTCTCT
AATTCGAACCTTTATTATTCGAATCTTTCTGTAATCATTGCCCTCCTCTT
CAGCTGGAAAGTAGTTTGAAATGCCCTCTATANCTATTATTCGAATCTTT
CTGTACTCATTGCCCTCCTCTTCAGCTGGAAAGTTGTTTAAAATGTCCTC
TATGAATTTAATTTTACTCTAGTTCGAAGACAATTTCAACGTTCCTTGAA
GATCGAATTAGAAATTAGATTCCAAATAAGGTCTCTGTTTTGATACTGTG
TAACGTGCACCCGAAATATCGAGTAAACGAACCCTGATTGGCTAGTTTGT
CAATGTGAGCAATTCTTTTAGCTATTCAGAGTTTGTTTATAGTTGATTAT
TTGGTGCAGATTACATGGAATCAAGCCAGAGAGCAACATTGAAATCTCCG
TGCGTTTTAACCCCTTCTTAACGAAAAGCTGCCGCAGTTGGACACTTTAA
ACTGTACGGATTTTCGGAGTTTCCCGGAAATATTTTTGGATCCTGGAGAC
GAATGTTCAATTTCAATGTGTGAAATAATACTGGGTTTTTAATCTTTTTT
GCTAAAAGTTTTTTTTTGCTCTCTTGGAATACAACGGCTGCGTGCTGCAA
GGCACTATTGTNATACTGGGTTTTTAATCTTTGCTAAAAGTTTTTTTTGC
TCTCTTGGAATTAGCCAAATTCTGGAGCCGCTCGCTGCGCTGCAGTTGAT
GTGCGTTTGTTTACATTTTTGGCTGGGGAAGCACTGCAAAACAGTGCTTT
TTGAGTAGATTTGGTGATTCTTGGGAAGAAAAAAGAAGAATACTGCTTGG
AACCAGCATCAAATGTATTGGAGTAGACTTCTATCATACATTGGAATAAC
AGACAATACTTTTTGAACATTAATGAATTTGTGAAACTTGCTTTTTTGTT
TACAAACTTCACTCAAGTATTTTTGTCGATTTTGCTGCTTTCGAAAGATG
TTGATGGAGACTACTAACTTGCAGAAGTAACTTTATATTGGTGCAAACAA
TGACTTTAATAGCTACACAAACATTATCATGGAATTCAGCTGGGAAAGAT
TTTTTACGATCGCATTGAACAGTTTTGATATGAGAGACATATCCAAAAGA
TATAGGCTCATAGTTCAAACATGGTTTTATGCATCCCTTTATTTATTTAT
TATTTATTATTTATTAAAGGATTTACAGTCCAGGCACACTAGGGCCTCTA
AACCGGTCTATCTACATAATGATTACAAAAGTGATCTTGAATCGTAACGT
AACGGGTGCTTTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
AAAATACAGATTTTTTGATTTTCTTTAGATAATAAAAATTTCATGATTCA
TTTTATTCATCTCAAAAATGACTGAAGAGACACCATCAGTCAGATCGGAT
TCATCACTGACTGCGCTGAAGGAAAAACTTTACTCTAACTCTCAAAATTT
TGTTTTTGAATCTTCCCAGTCGTCAAAGACCGAGTTATAAAAGTGACTGA
TTTTGGGGTACGTTTTACGTGCAGGTTTTGATTGGAACCAGGACAAGAAA
AGGATAAGCGAATCCGAAGAAAGTGCCCAAAAATTCTGAAATTTTGGAAG
TACCACAAAAAATTGAAAGTACGTTACGACATTGACATGACTGTGTATAT
CATTTAATGGATTGTTGTTTTATTGTTTTGGATATCTGGCATACCGTCAA
CGGCTCTAACTTGGGACGAGTGGTCATATCATGGGATGGTTGACTTTCTG
GACTGTATTTTCACTGTTAAATCTCTGTTGACAACAGGTTTGTTTTCTAT
GATTTGCGACTATGTTAATTAAATGACTTTGGAGGTTCGGTAAAATGATT
GCCAAATTGCTGTCCCATGTTTTGTCAGAATGTCCCAAGTTAGAGCCCTT
GACGGTACAAATCCACTTTGTCATTGAATTTTCAGGCAAAGTTATGATGC
CTAAAAGCACTGTCTGAAATTATTCTTTTATTTGGATTATTAGTTATCAG
TGCTCAATTCTATTCGGTGGAAAAGCTTCCAACTTCCCAACAGAAAAAGT
ACTGTCAAGACTGTCACAAAGGATTATATAAAAAAATTTTGAGATGTTTT
TACTTTATCATTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGAAAATTCCCCAAACTATGAGTGATTATAAACGTTTCATATT
TGGAAGAGGCTTTTTTTTGAAATCCAATAAAAGTTCCAACATAAATCCAA
TCTCTTTTTCCTATTCTTTGCTGGGAAAAAGAAGGGGGAGTCTCACTGTT
TTCTTACCAAATATCTGCGAATGCCGCCTAAAAACGAAAGCGAAAGTAGT
TTTTGTCCCTACAAGCTGCGCACGGCAGCGCAGCGAGCGGCTCCAGAATT
TGGCTAATACAACGGCTGCGTGCTGCAAGGCACTATTGTTGTTCCCAATA
GGCCAGTATCCAAATATTAATGCCCTGTATTTGCCTTATCTAGAATGCAA
ACGACGTTTGGCAAGACCATCGAATCTAAAATTATACCAAGCCTGTCTAG
AACCATCTCACAATCAGCACAAGATTCATTCAAAGAGTTTAAGCAGACCA
TTGATAGCTCTATCAATTCCATGTTGTCTTCGGCGGCCGTAGCGGCTGCG
AACTCGTCTAACGAAACTTTCAATGTCCATAAGACAATCGAAGAGAAAAA
GGTAACGATTCTTGTGGTGAAGTTCTTTGCACTAGTGGCTTATTCCAGAA
ATAATCGGTACCCCCCTGTTGAGGAGATGTGACGTCCAAGGTGGTCTGGA
AGATGAATACAGCGGGGTCTGGTTTTTCGAGTGTAAAAATCCATGACCAT
GGTGGTCAGTAAAATGAGGTGGAAAATCCAGGGTGGTCAGTAAAATGAGG
TCGAAAATCCAGAATGGTCAGTAAAACGAGGTCGAAAATCCAATGTGGTA
CAAAAAATGAGAAAAATCCAGAGGGAGAGGGCTCACCTTTCCCAAAAAAG
ACCTCCCCAACATAGGGGGTACAAATTTTTTCTGGAATAGCCCAATGTTT
TAAGACCATGCTCAGCAGACGTTACAATTTCCAGTCGTTCTGGTTTCGGT
TTTCGTAACGTGGTAGGAAGTATTCAAATTAGTTCTCCCTTTAGGGCCAG
CGTCTCTTATCCCTACAGAAGCTTGGCCTACTGGATACTAGATCCCATCT
TATCTTAGATCCTTTTCAGTTTCATTACCGTAACTTCGTGTAATGCCGAC
ATACCTTGTCATAGCAACTATCTGCACAGTAGTTACAGTAATATTTTAAA
CATATTAATCATAAGGTTTTATTTATAGATTGATCATTCAAGTCAGTAAA
GAATTTGACACGAAAATTTTTTATTTAAAAATTAAGCATAAGCTTTTCGA
CACAGTCATCTTCAGTGCAAATGATTTAAATAAAACGTTAAAAATGCTGT
ACAGTTTATACAAGAAATGTTTTTGAGAAATCACTGCTAATTCCCATGGG
CTATAGTAGATATTATAGAGTTTTATTTATAAACATTTAAAAGACCGGAT
AGTTGCTGTGATTGAATTAGACAAGGCATGTTGGCATTACACCAAACTAC
GGTATATGATATTAGAGTGACTAAAAAGGATGTCATCAATCAAACTTCTT
CTTTCGTTTGCTTTTAGACTTACATCGAACGTTTATTCGAGGACGGGGAT
TACAATANC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035597XLOC_035597Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056513-exon-scaffold_276-1575043694:524261..524417TCONS_00056513-exon-scaffold_276-1575043694:524261..524417Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1575043694:523486..523697TCONS_00056513-exon-scaffold_276-1575043694:523486..523697Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1575043694:523142..523201TCONS_00056513-exon-scaffold_276-1575043694:523142..523201Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1575043694:520573..520738TCONS_00056513-exon-scaffold_276-1575043694:520573..520738Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1575043694:519605..519791TCONS_00056513-exon-scaffold_276-1575043694:519605..519791Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1575043694:510117..510324TCONS_00056513-exon-scaffold_276-1575043694:510117..510324Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1575043694:509109..509150TCONS_00056513-exon-scaffold_276-1575043694:509109..509150Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1510915933:524261..524417TCONS_00056513-exon-scaffold_276-1510915933:524261..524417Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1510915933:523486..523697TCONS_00056513-exon-scaffold_276-1510915933:523486..523697Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1510915933:523142..523201TCONS_00056513-exon-scaffold_276-1510915933:523142..523201Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1510915933:520573..520738TCONS_00056513-exon-scaffold_276-1510915933:520573..520738Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1510915933:519605..519791TCONS_00056513-exon-scaffold_276-1510915933:519605..519791Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1510915933:510117..510324TCONS_00056513-exon-scaffold_276-1510915933:510117..510324Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1510915933:509109..509150TCONS_00056513-exon-scaffold_276-1510915933:509109..509150Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1491911889:524261..524417TCONS_00056513-exon-scaffold_276-1491911889:524261..524417Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1491911889:523486..523697TCONS_00056513-exon-scaffold_276-1491911889:523486..523697Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1491911889:523142..523201TCONS_00056513-exon-scaffold_276-1491911889:523142..523201Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1491911889:520573..520738TCONS_00056513-exon-scaffold_276-1491911889:520573..520738Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1491911889:519605..519791TCONS_00056513-exon-scaffold_276-1491911889:519605..519791Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1491911889:510117..510324TCONS_00056513-exon-scaffold_276-1491911889:510117..510324Clytia hemisphaericaexon
TCONS_00056513-exon-scaffold_276-1491911889:509109..509150TCONS_00056513-exon-scaffold_276-1491911889:509109..509150Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_276supercontigscaffold_276:509109..524417 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.45015	6.39761	7.05964	8.25784	24.7682	19.6439	18.7806	21.4598	9.12818	12.8847	9.98556	8.96374	9.01117	10.13	10.8492	10.3492	15.0534	10.2885	5.99333	7.06886	8.10585	7.63622	5.99503	8.05703	20.9831	22.0156	3.63865	5.15716	2.73687	4.84289
Blast
[Close]
BLAST of TCONS_00056513 vs. Swiss-Prot (Human)
Match: EDC4 (Enhancer of mRNA-decapping protein 4 OS=Homo sapiens GN=EDC4 PE=1 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.080e-34
Identity = 82/273 (30.04%), Postives = 155/273 (56.78%), Query Frame = 1 
Query:   85 HMQLLQKSAASQFSKANKEFSKQCTNKLDQFVKDVGSVANEKEERTTQILSNIVNNTIAMKLEKTIRTEMKQTVLAGMEKMTAKYFESLNNQVAQKISLWERTLREECAELVKSKPVAESIGYAAASILEGTIPNAYRESFQSILLPGFEKASMNMFMQINRTFQQGTKQYLERLDKHMESKNSNQEDTQENILTNLHDLVQSFQGTADRLTTGVETNLEALMQKQLRDATDRMQTTFGKTIESKIIPSLSRTISQSAQDSFKEFKQTIDSSI 903
             ++ LQ +      +A +   +Q   +L++ + +      + +E+ TQ LS  +++ +A +LE++IR E+K+TV   + +        L+N VA K++  E +++E  ++L+KSK + ++I  AAA  L+G +  AYRE+FQS++LP FEK+   MF QIN +F+ GT++YL++L+ HM+S+ + +++ +E +L  L  LV + Q   +++   V  ++ A +Q QL  A   +Q +        I+  + R +      + KE +  + SSI
Sbjct:  978 QLEGLQSTVTGHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPMAGQLSNSVATKLTAVEGSMKENISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQQLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVAGSVRAEVQHQLHVAVGSLQES--------ILAQVQRIVKGEVSVALKEQQAAVTSSI 1242
The following BLAST results are available for this feature:
BLAST of TCONS_00056513 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
EDC43.080e-3430.04Enhancer of mRNA-decapping protein 4 OS=Homo sapie... [more]
back to top