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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056505 ID=TCONS_00056505|Name=TCONS_00056505|organism=Clytia hemisphaerica|type=transcript|length=260bp
tttgttgttttattATGCCTGTTTTGAATGCAAGAAGATTTCTAATCGAA
AAGTGTATTGTGCAGTTTAAAGTGATACAGTGCAAAAAAGTATCTATTGA
GTTGCAAAGTTGCGGTATCTAGACGTTGGTATGGCGTTACCAAGGCGTGA
GTAGTGTGGGTATAATGGCGTTACCAAGGTGTTGGTTTGGTGTTGTCAAA
AAGATTGTATAGCGTAACGAAGGTGTTGATACGGCATCATAAAGTCATGA
CATTGCGTTA Run BLAST on NCBI transcript from alignment at scaffold_276:443366..450810- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056505 ID=TCONS_00056505|Name=TCONS_00056505|organism=Clytia hemisphaerica|type=transcript|length=7445bp|location=Sequence derived from alignment at scaffold_276:443366..450810- (Clytia hemisphaerica)
TTTGTTGTTTTATTATGCCTGTTTTGAATGCAAGAAGATTTCTAATCGAA
AAGTGTATTGTGCAGTTTAAAGTGATACAGTGCAAAAAAGTAAGAAAGAA
TGTTATCAACTTACCTCCATAAGATATGTGACTTGTTGTTCGAGCATGTT
AGAATGTTCTTGCGAAGAAGCCAACAGCTCTAAATTCTTCATAAAATGTC
CAGTCAGTTGTCCATAATCCAGTGGTGCCCAATAATAAAATTCTTGTCCA
TTGTTGTAGTTTTCCATCATAATTTTTAAACTTTTTTCACTTTAATAAAC
AAAACGCTTTCTAACGTGCAGTCAGAAATCGAAATTCACTAAGAATGAAG
AATTTTTGTCACTTTCTTTCTTATAATTCGTTAAAAAAGTGACGTTAAAT
TTATTTTTCTCCTATTTGACGTCAAATAAGTCTAAACAAAGAATCGAACG
TTTGTAACGGTTTTTTGAAACGTTCGAATTCCACGTGACTCCATGTGACT
TGAGAAATTCCACGTGACTTTTTACACGTGACCATTTTGATAACTTTGTC
CAATTTCAGCCTCAATTTTGCTTTTTGACAGTAATTCTCAAAGTTGTTGT
TGACGTTGGTATGGCGTTACCAAGGCGTTGGTATGATGGCGTTACCAAGG
TGCTAGTTTGGTGTTGTCAAACAGATTGTATAGTGTAACCAAGGCGTTCG
TAGGGCATCATGAATTTACTGACATAGCGTTACCGAGACATCGATTTGGT
GCTACAATAAAGGCGTTGATATGACATAACCAAGGACTTGACATAGAGCT
ACCAAATTTCTAGTGTTAAAAGATCCCATCCGACTCTTTATGGTAAGATT
CATGTCTCAGAAATTTGCTTGCTTTTTGTATAAGACTAAGCCATGCGCTT
TTTATACATATTTCAGCAGGCTTTTTCCCATGCCATTATACACTTCGGTA
TTCTTGACTTATTTTTGGAGAAAACTATCCTAAATTATTCTTAACATAAT
GCTTTTTCGAAATGAAATATACATTTTACACTTAAATATATACCTGTCTT
AGGTATTCTTATTAGCTAACTATTTTCTTGCAGACAATATTCTTACAAAA
AGCGTAAAAGAGTCTAGTTTAATTTCAGGTAACCGGTGCATTCGACAGCA
ATACAATTTTAACGGTTTAACCGTTAGTTAAACGTTAGTTAAACCATTTA
ATTTTTGAAGAGCTTCCATAAATACAACGAAAAGCCTTTTGGACACCGAA
ATTACAATCTTAGAATAAATGTTAGACTTCTTGTTTTACTAACAATAAAT
GCTGTAGATGCTTCCTACAATAGGTGCCACAAGATTCCTTGGAAACATTT
TTGTTCTTTGAATTGAAAATTAATGAAATTAGCCAAAAAATTAAAGTAAC
GGATATTACCATCGTTAAATTAGGCTATTCCAGAAATAGTCTGTATACCC
CCTATCTTGATGAAGTGTGACGTCCAAAGTGGTCTGGTTTTTCGAGTGTA
AAAATCGAGGGTTCGAAATTCCAGTTAAAAGAAATGAGGAAAAAATCCAG
GGGGGTCACCCTTCCTTAAAAGACCTCCTCAACATAGTGGGTAAAAATTC
ACTTAGAGTAATTTTAAATGTAAATCCTCCCAAACTCAAAATTTCCTAAA
AATACAATGTTTTGCTTCAGACGGTAAAATGTGAAATCTTTAGTTTGGAT
CAACCTAAGATACCATAAGAAATTTTGGAATAATTCTCCCCATAAAGTTA
ATAGTATCCATTACATGTTTTTTTTATAAGCATACAAAAATCCAAAAATC
TGGCTCAGAAATGCTTAGATCGAAATTAAATTCCGCGAAAATTTCTTCCG
CGAAAATTTCTTCTCGCGAAAATTTCTTCCCTTAAGGTACATTTTCAGCC
CTTCAGTTCTCTGACGTAAATGTAAATCAAACACCTCTGTCTCAGTGAGC
CGGTGACTCAATCATCGTAATCTGGTCAGATTTTAAGGTCTCAAAATTTT
TCGCAGGAGAATCAGCAGAAGCTCTTAGGATAATAAAGAATAAAAAATTA
AAGGAAGCATTTTACGTGACTGCTCTTGATGTGGTACATAATATAATTAA
TGATTGGGGTTTGACCATAAAGTTCCAGATTCATCATTGAGATCATTTTC
GGCAATTATTTTCACTAGCATAACAAGGGGGGCAGATATGGCCGGATCAC
TGATACAGGGGTGTAGTTTGACTTGAGAGGACATACTGCTCATTTTTTTT
GTAAGCATAACGTTTATCAGCGTAACGAAAGGCTCAAACTCGGTGAAAAT
TAGGCAAAATGCTGAGCATACATCCAAGCTGAAAGGAAAAAAAAACTTGT
GCAGCTTTTTTCAAACGCTGACATTTTCAGAGTTTTAGCTTTTTTAAACC
AAAGATTTTTGCCTGCGGCGCCAAATTACAAAAAAACTGTAATTTGTTGA
GTCGAATTAATGTTCCGACTTAACAATTCGAAATTTCCAATAACCCAAAG
AAAATCAACAAAACAAAGTCTAAGCATATAAATAAACATAAATTAGGGCT
GAGAATGAGATTTTGCTAAGCATACGGAGTCTCGACCCGATTTTCCTGTA
TGCTTATAAAAAATGTATACTTACTAATACTGAAAAAAGTTGTTATAACG
AAACGCTTATGTCTATAGAAACTTTTTTGTCTTAGAGATAATTGCCTGTC
TTTCTCGAAGTAACTACCCTGTCACGGAAAAACTCTTGTTGTATAATGGT
TGTATATTCTTATTCACTCTTTTTTCTTCTCTTTTCAGGACACCACCGAA
AAGCCACTAATTAGTTCTTCAAACGTGAAACTCGAATACAAAGAATAGGA
AGGCTTTTCGAAAGCAAACGAACAAACATAAGATGAAAAAGAAATGATGA
TTTTTTTATTCTTTCATGGACACTTGACACTTTCAAAAACGGAAAACATC
GTCCCACCACTTTATTATATATTTTATGTAAAATGATTAGAATTTTAATA
TATTTTAAATACATACAGTGTCTCAAAAATCCACTGGGCGGACCCGAGCA
ATACAAATTACAAAACTTACAATTACAAAAATTTCTCTGGGGTGGCCAAG
GCAAATATGGTGCCCTTTTAAAAGATTTTTTGTTTTTGGCGCCCCTCTCT
ATATATACGCTCATTTTACTTACGAATACAATACAAAAAAGGGAGTGTGC
GAGCGAAACGAGCCAGAAAATTTTGAGTTTTTGAGGTGATGAGGGGCGCC
ATTTTTGTTTTTTCATTTGTCAATCTTTCGATATGGGCGCCTGAAAAATC
CTTCTTGGCGCCCCTTATTTTTGGGCGCCCCCTCTCAAAAGGGCTCCGCT
GGGGGGGCCTGGCCCCCTGGCCCCCACTGCCACCACGCCATTGCCAATAA
CTACCGGAGGACCACTCTACTACCAGCCCCGAACACGCCTGCATCAGAGA
GCCGGTGACAATTCATAGTCGATGAAAGAGTACTGTAAGCATTCTCAAAA
CAACTGAACGGGGGAAGCTGGATGGCATGAAACTTTGGGTATAAAATTAA
CTTAAATCGTTTTCTTCACTCAAACTAGCTTATAATAAGTCGACACATTG
ATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGATTGAT
TGATATGAAACAGGAGCTCCCCTATTTGTTATGTGATTTGTTTACAATGG
CTCTTTCACTGTAAGAAATAAATTCTGACAATACGAGAGACCATTGTATA
CTTTTTTGTAATTATTATTTTTTTTTTCGTTGGTATTTTCATAAAATGCA
AAATGAGGCATAAATTGGCCGATGATTCAATTTGAGGTTACTAAAATGAC
GCTTTTATTTATTACAAACAGAATAATTGTTTCAAGATTGTTTAGTGATT
ATTTTCTCTGCGTTTCTGAAATGAAAATGTCTCACTGAAAAACTATTTTT
TAATCAAAAAAATTATAGTCGGTGAACTTTAGTTGTCGGTAAAAAATATA
CCATTTGACGGTAAAAAATTGACGTCAATTAAAAGTTTCGTCATTTTTAA
GCGTTTCCAACGTTACACGATTCAAAATGGTAGATTTTAATTCAAAATGG
TAGAAATGCGCAAATAAAAATCGAGCGTAATAAAATCGAGACATAATTGA
TTGATCGATTGATTCCAAAATTTAAAAAAGTGCTGCTAAAATGTTATCAA
AATCAAATGCAAAAATGTCTCCGAAAATCAGCAAAAAGTCTCAAAAGTCA
CCACAAAAAATTTTCCAATATTCTTCTAAAAATCACTTATTTTCTATTTT
AGTAGAGGGCATTTTGTAAAATCGCTCGAATGTTTTGATCAAAGCACTTG
TTATACATTTTTGGAAAGCGAAGGGGTAGGGGAATCGAAATTACAATGTT
TCCAATTTTTTTTCGGACACTTTGGTGTGATTTTCGGACAAATATGACGG
TCTCAGGCAAAAATCCTAGGGTTAAAAATTAATGAAAATTTTAGCTCGAG
AAAACGGAGACCTGTTGTATATTTTTGGAAAGCTCTCAAAAAATTAAGAT
TAGAGATATATTGCAAGTATAGGTGATTTCTGTACCTAACTCGAGATATT
AGCCCTTGAAAACCGTGTTTTTCAGCCAGAAACAGCTATTTTGTCCAGTT
TTTGCGCTTTTTGAAGCTCAATATCTCGAGTTAGGTACTGAAATCACCTA
TACTTGCAATATATCTCTAATCTTAATTTTTTGAGAGCTTTCCAAAAATA
TACAACAGGTCTCCGTTTTCTCGAGCTAAAATTTTCATTAATTTTTAACC
CTAGGATTTTTGCCTGAGACCGTCATATTTGTCCGAAAATCACACCAAAG
TGTCCGAAAAAAATTGGAAACATTGTAATTTTGATTCCCCTACCCCTTAG
CTTTCCAAAAATGTATAACAAGTGCTTCTAACAAAACATTCGAGCGATTC
CAAAAAATCGAACAAAATTCCACCTACTATTTTATAAAGCATCACTTAGA
ATCGGTATATATTTCCCCAAGTCTACGCATTCCCTATAACCTAAAAAGAA
CATTATTTTATCTATGAAAAAATGTATAAGAATTGCTTGAAAAATTACCA
AAAATCTTGAAAAATTTATTGCAAAAATATCATTAAAAAACTTGCTTCCA
AAATATGCAAAACACTTCTAAAAACTACACGCGAAAATATGTGAAATGAA
AGGCAAAATTTCGCTGAGGAAAAATCAATGAGTAAGAGCTCAAAAAATGG
GGATAAAAATCTTTAAAAAATTGAAAAACTGTCGCACCAAAAAAATATCT
ATTAAATGTGTTAAAAAAGCTGAATGAAAAAGCTTATTGGTATTTTCAGT
TTTGATCGCCTTTACCATAGCGTTGATTCTTCTTACAACTATTGAATTTT
TTGCGAATGTTTTTCTCATTTTGATTTTTTCGATCTGTTTCATAATGTTT
CTTTGTCTGAAAGTGTTGTCCCTTTGTTTGGCTTGATTTTTGTTCATTTG
ATTGAAATTCCCTACAAAATTTGGTTTGGTTTTTTGTCTGCATAACTTGT
TTTTGAGCGATTGGACTGCTTTTCGCTTGGTCTTTTATTTTCTGTATAGC
GCTTGTGAAAAGATTGCACGCAGGTGTTCTACGCACCAATTTTTCATCGG
CCATCTCTGAGCATTTGAGTGCCTTGACTGGAGTTGCTTGAACTCGAACA
ACTTGAGCCTTTTGGAAGAAGTTTTCTACTGAAGATTTTCTTACCAATTT
TTCATCTGGTAATTCTGAGCATTTAATAGCTTTAGTTAGGGGAGCCTCTG
CCCCAACTTTTTCGACATTTTTGAAAAATTCTTCAACGGAAGATTTTGAA
TCGGCTGTTTGAGAACATGCTAAAGCTCCAGTTGTTTTGGTTTTTATTTC
GGTAGCAGACTTTTTAATTTGAGGCTCAGAATTTAAAGATTGATTTTCTG
TTTGAGTTTGAATCTCAACAGAAAAAGCATTTGGAGTTTGCGTTGCAACT
CCTTTCACAGATTTAACAATAGTTTGCGTTTTGACTGACACAGCAAGGGA
TTTTTGCGTTTGCATTGCTACTTCTTGGCAACTTTTCGTGGTTTGAGTTT
CAACACAAATGGAAGGGTTAGTTATTGTTTGAGTTTGGACAGAGGACTTA
TGAATAGAAGATACCTTATTTTTTTTGGCATTATATTGTGACTGTAATTC
CTTTCGCAGTCTTTGAATTTCTTCGGCCATGTTGTTCATTGTATGTTCGT
CATTCACCAATTTCCATTGCAATGCTCGATTCTCCTGTAAAATAAAATAA
TAATGAAAGTATTTAAACAACCAGTCTTTCATGAAAAAAATTTCCTTTAC
ACATTTCTTCTCCGACTGACCCGCCCGCGTTTGGCGCCCTCTCGCTTCCC
TGGCTTTACTTCATCTGCGATTTTAAAAGAAGACATTACATTGCTTTATT
CGTTCGAATTTTCTAGATTTTCCAATGTTTACAAAATAAAAACAAAAAGC
AAAAAGAAAAAAATGGTTCAACATTCTTTCGAGAGGGAAACAAGGTGTAA
AGATGCAGACACTTTTTATTTTGATTGCAGACATAGGCTGAATTTCTGAT
GCAAGAAGATTTCAAATAAAGCAAAGTATTTGTTGTGTACATCCCAGTTT
ACAGTAATGAATCGTAAAAAAAGTAAGTATGTTATCAACTTACCTCCATA
AGATATGTAACTTCTTGTTCGAGCATGTTAGAATGTTCTTGCGAACAAGC
CAACAGCTCTAAATTCTTCATAAAATGTCCAGTCAGTTGTTCATAATCCA
GTGGTGCCCAATAATAAAATGCTCGTCCCTTGTTGTAGTTTTCCATCATA
TTTTTTTAAATTTTTTACACTTAAATAAACAAAACGCTCTCTAACGTGCA
GTCAGAAATCGAAATTCACTAAGAATGAAGAATTTTTGTCACTTTCTTTC
TTATAATTCGTTAAAAAAGTGACGTTAAATTTATTTTTCTCCTATTTGAC
GTCAAATAAGTCTAATAAAGAATCGAACGTTTTTAACGGTTTTTTGAAAC
GTTCGAATTCCACGTGACTCCATGTGACTTGAGAAAATCCACGTGACTTT
CTACACGTGACCATTTTGATAAATTTTGTCCAATCTCAGCCTCAATTTTG
TTTTTTCGACAAAATGTTAAAGCAGAAATTCTCAGAAAAGTGCCATTGGT
AAAATGCATATTTCATCTTAATTTTCACTGATTGTTTTTCTTTGGCTCAA
ATTTAAAATCTCGTAATTTCTTAGGTATCTATTGAGTTGCAAAGTTGCGG
TATCTAGACGTTGGTATGGCGTTACCAAGGCGTGAGTAGTGTGGGTATAA
TGGCGTTACCAAGGTGTTGGTTTGGTGTTGTCAAAAAGATTGTATAGCGT
AACGAAGGTGTTGATACGGCATCATAAAGTCATGACATTGCGTTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056505-exon-scaffold_276-1575043694:450722..450810 | TCONS_00056505-exon-scaffold_276-1575043694:450722..450810 | Clytia hemisphaerica | exon |
| TCONS_00056505-exon-scaffold_276-1575043694:443366..443536 | TCONS_00056505-exon-scaffold_276-1575043694:443366..443536 | Clytia hemisphaerica | exon |
| TCONS_00056505-exon-scaffold_276-1510915933:450722..450810 | TCONS_00056505-exon-scaffold_276-1510915933:450722..450810 | Clytia hemisphaerica | exon |
| TCONS_00056505-exon-scaffold_276-1510915933:443366..443536 | TCONS_00056505-exon-scaffold_276-1510915933:443366..443536 | Clytia hemisphaerica | exon |
| TCONS_00056505-exon-scaffold_276-1491911889:450722..450810 | TCONS_00056505-exon-scaffold_276-1491911889:450722..450810 | Clytia hemisphaerica | exon |
| TCONS_00056505-exon-scaffold_276-1491911889:443366..443536 | TCONS_00056505-exon-scaffold_276-1491911889:443366..443536 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:443366..450810 - |
Blast
The following BLAST results are available for this feature:
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