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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056341 ID=TCONS_00056341|Name=TCONS_00056341|organism=Clytia hemisphaerica|type=transcript|length=1054bp
gaaagccattgtgcgattagctcgtaatcacataataactcgtacaattc
gaaaattgcactcgtgatttttttgtttcgaattttcctcgtcctttctg
actcggaaaattaatagcaaaaaaatcactcgtgcaattatattcgaatt
gcactcgttatcatgtgattacatatactaattcaataaacaaaacaaGT
AATAAAAGTGATGAAGATTCTTTATACAAATCCAGATCAGTTAACATCgt
ttaagaaaaaagaattacaGTCCATGGCCCGGGAAGAAAAACCCCATATA
ATTGCAATCTGCGAAGCTAAGACAAAAGCAGGTGCCTTGAAGGAGCTACA
TGAATATGAATTCGATGACTAAAAAATTGCTAGCCAAGTTAACCTAGATA
TAGATCAAGGGCGTTGGCATCTCGTGGCATTGTCATATTTGTCCATATCT
CCATTAAACACTTGGTGATCGATGTCAAGCCTTCGGCAACTTTCAATGAA
GTTTGCATGATTGAAGTACAACTATCAGGAAAAGATTTGCTCGTTGTTGC
ATGCATTTATCGAAGCCCAACTAGATTTACGTCATCTAACGAAAATAACA
ACAACTTAAACTTATTGATCAAGTCCATTGcattaaacaaaaatattcgC
ACAAATGTTTGTTAGGTGATTTCAACTTTCCAACAATCAATTGGGAAAAC
TGGACCACCCCGCATCTGGAGGATAGCAAAGAAGATAAATTTTTAAATGC
TTTGAGAGACACATATCTCCATCAACATGTTAATGAACCAACTCGATGTA
GAGGAACTGATGACCCATCCCTCATCGACTGGATCTTAACAGGCGAAGAA
AACCAAATTAGGAATCTNTACATGAATATGAATTCGATGACTACAAAATC
GCTAGCCAAGTTAACCTAGATACAGATCAAGGGCGTGGCATTGTCATATT
TTTCCATATATCCATTAAACACTTGGTAATCGATGTCAAGCCTCCAGTTA
CTTTCAATGAAGTTTGCATGATTGAAGTACAACTATCAGGAAAAGATTTG
CTCG Run BLAST on NCBI transcript from alignment at scaffold_272:163445..164498 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056341 ID=TCONS_00056341|Name=TCONS_00056341|organism=Clytia hemisphaerica|type=transcript|length=1054bp|location=Sequence derived from alignment at scaffold_272:163445..164498 (Clytia hemisphaerica)
CGAGCAAATCTTTTCCTGATAGTTGTACTTCAATCATGCAAACTTCATTG
AAAGTAACTGGAGGCTTGACATCGATTACCAAGTGTTTAATGGATATATG
GAAAAATATGACAATGCCACGCCCTTGATCTGTATCTAGGTTAACTTGGC
TAGCGATTTTGTAGTCATCGAATTCATATTCATGTANAGATTCCTAATTT
GGTTTTCTTCGCCTGTTAAGATCCAGTCGATGAGGGATGGGTCATCAGTT
CCTCTACATCGAGTTGGTTCATTAACATGTTGATGGAGATATGTGTCTCT
CAAAGCATTTAAAAATTTATCTTCTTTGCTATCCTCCAGATGCGGGGTGG
TCCAGTTTTCCCAATTGATTGTTGGAAAGTTGAAATCACCTAACAAACAT
TTGTGcgaatatttttgtttaatgCAATGGACTTGATCAATAAGTTTAAG
TTGTTGTTATTTTCGTTAGATGACGTAAATCTAGTTGGGCTTCGATAAAT
GCATGCAACAACGAGCAAATCTTTTCCTGATAGTTGTACTTCAATCATGC
AAACTTCATTGAAAGTTGCCGAAGGCTTGACATCGATCACCAAGTGTTTA
ATGGAGATATGGACAAATATGACAATGCCACGAGATGCCAACGCCCTTGA
TCTATATCTAGGTTAACTTGGCTAGCAATTTTTTAGTCATCGAATTCATA
TTCATGTAGCTCCTTCAAGGCACCTGCTTTTGTCTTAGCTTCGCAGATTG
CAATTATATGGGGTTTTTCTTCCCGGGCCATGGACtgtaattcttttttc
ttaaacGATGTTAACTGATCTGGATTTGTATAAAGAATCTTCATCACTTT
TATTACttgttttgtttattgaattagtatatgtaatcacatgataacga
gtgcaattcgaatataattgcacgagtgatttttttgctattaattttcc
gagtcagaaaggacgaggaaaattcgaaacaaaaaaatcacgagtgcaat
tttcgaattgtacgagttattatgtgattacgagctaatcgcacaatggc
tttc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056341-exon-scaffold_272-1491911889:163445..164498 | TCONS_00056341-exon-scaffold_272-1491911889:163445..164498 | Clytia hemisphaerica | exon |
| TCONS_00056341-exon-scaffold_272-1510915933:163445..164498 | TCONS_00056341-exon-scaffold_272-1510915933:163445..164498 | Clytia hemisphaerica | exon |
| TCONS_00056341-exon-scaffold_272-1575043694:163445..164498 | TCONS_00056341-exon-scaffold_272-1575043694:163445..164498 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_272 | supercontig | scaffold_272:163445..164498 . |
Blast
The following BLAST results are available for this feature:
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