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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056165 ID=TCONS_00056165|Name=TCONS_00056165|organism=Clytia hemisphaerica|type=transcript|length=1935bp
CTTGCCattatgcttaatttttccccatatctgagcctacatatgcttat
aagtgcaatgcttataaaaaaaaaaccatgTATCTTTTTACAcgattttt
agtattttgcttCACCTCGCAAGAATATTCGAAAGAAACCCTAACTTTAG
GTTTTTCACGAGGCTAACAAAGGGATACCAGAACAAAAAACATAAAGGAG
ATAGTTTGAGGCATTTCTTGCTATAACAACCTCCCTAATATTTTATCTAC
AAATAAAAATATGACTTCTTTGTAAAACACGAGCCAAATGTACCAAAAAA
GAATAGAGCTGAAGGTTTGCAGAATTTAAATTTATTCCTGCTCACTTTTT
ACTTTCTCCTGGCCGGTGGGGATTGATTTTATCAATTTAAATTATCAATT
TAAATCATGGGTAAACAACGAAAGAAGAAGAACCTTCCAGCTCAAGATGA
AGTTCAGGACACTACAGGTGTTCCTCGCTCATTTGTTTTTCACCGTGGAG
TTGTTGGAAAGACAGTGGTCAACTTGGTCAACGACATCAAACATGTAATG
CAGCCTTTTACAGCCTTGAATCTAAAGGTGACCAAAAATAATGTTCTAAA
GGACTTCGTTCATGTAGCTGGACCATATGGTGTGactcattttatcattt
tatccaAAACAGAAAAGGCACCCTATTTAAAGATTTGTAGACTCCCTAGA
GGCCCTACACTGACTTTTAAAGTGAATGAATATTCTTTAATGAAAGATGT
TATTAGTATCTTAAAAAGACCAAAATCTCTTGATCAACAATTCAAGCACC
CCAGTCTTGCAGTACTGAATGGATTCAGTAATGAAGAAGCACACACAAAG
TTAATGTCAACAGTTTTTCAAAACATGTTTCCTCCTCTGAAAGTTCAAAA
GGTCAAATTGAGCAATATCagaagatgtagtgtttttgaTTATGATAGTT
CTACTGGTTTGGTGGAGTTTAGACACTTCCATATAGAAGCCAAACCAACA
GGGCTCAGTCGTGGtgtgaaaaagcttttgaaaaacaaaatcccAAACCT
CGGCAAACTTGAAGACATCAGTGATTTTATGGCTGGTGGTGCATACCTTT
CAGAAAGCGAGGGAGAAGAACCTGCTGAGTCTCAAGTCACCCTACCACAA
GCAGTGCGAGGACGTGGAAATATGAAGTCGTCACAAAGTGCCATTAGGCT
TACAGAAATGGGTCCAAGACTTCAATTGATGTtgctaaaaattgaagaag
GAGTTTGTGAGGGAGAAGTGATGTATCACAAGTACGAaagcaaaacaaag
aaagaaatgaaGGAACTTAAAGCACGTAAAGTTAAAGCTAAAGAAGAGAA
GGATAAACGCAGGCAAGAGCAAGAAGGAAATGTTGCACGCAAACAACAAG
CAAAAGAAGATCACAAGGAGAGGAGTTTGGCTGGCATGAAGAGAAAAATG
GAAGAATCAGGGGAAACGCAGGAAGGATCTAGTGAAACTGTGGAGGAAAA
TGAGAAGCAAGATACCTCAATGAGTGAAACAGAAGAAGAAGAACAGGAAG
AAGTCGAGCTAAcaaaaccaaaaaagaaaaagagaaatataCCTCCTCAA
CCAAAATCCAAAGCAAAACCAGCTGGCAAGTTTAGTAAAACAAAAGGAAA
GAAAcatttaaagcataaaaaatgatgtagtttctacttttgtaaacaac
tttttatagggtttttatattttactattttactagatagcataaaaaca
atcatgatatgataaaaaaatttcttaaactattttctttgatgatAAAG
ACGGAGCCAGTCAAAATTCCAAGCAAATAGTCTCTAGCCATTTTTTATGt
agaaattgagttttggcCTTCAGAGTAACAGATCTAGGTGGTAAATACCT
GCTTCAGGCCCCACAACTTTTTGAACTCCCTCAAG Run BLAST on NCBI protein sequence of TCONS_00056165-protein >TCONS_00056165-protein ID=TCONS_00056165-protein|Name=TCONS_00056165-protein|organism=Clytia hemisphaerica|type=polypeptide|length=422bp
MGKQRKKKNLPAQDEVQDTTGVPRSFVFHRGVVGKTVVNLVNDIKHVMQP
FTALNLKVTKNNVLKDFVHVAGPYGVTHFIILSKTEKAPYLKICRLPRGP
TLTFKVNEYSLMKDVISILKRPKSLDQQFKHPSLAVLNGFSNEEAHTKLM
STVFQNMFPPLKVQKVKLSNIRRCSVFDYDSSTGLVEFRHFHIEAKPTGL
SRGVKKLLKNKIPNLGKLEDISDFMAGGAYLSESEGEEPAESQVTLPQAV
RGRGNMKSSQSAIRLTEMGPRLQLMLLKIEEGVCEGEVMYHKYESKTKKE
MKELKARKVKAKEEKDKRRQEQEGNVARKQQAKEDHKERSLAGMKRKMEE
SGETQEGSSETVEENEKQDTSMSETEEEEQEEVELTKPKKKKRNIPPQPK
SKAKPAGKFSKTKGKKHLKHKK Run BLAST on NCBI transcript from alignment at scaffold_268:86951..94209- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056165 ID=TCONS_00056165|Name=TCONS_00056165|organism=Clytia hemisphaerica|type=transcript|length=7259bp|location=Sequence derived from alignment at scaffold_268:86951..94209- (Clytia hemisphaerica)
CTTGCCATTATGCTTAATTTTTCCCCATATCTGAGCCTACATATGCTTAT
AAGTGCAATGCTTATAAAAAAAAAACCATGTATCTTTTTACACGATTTTT
AGTATTTTGCTTCACCTCGCAAGAATATTCGAAAGAAACCCTAACTTTAG
GTTTTTCACGAGGCTAACAAAGGGATACCAGAACAAAAAACATAAAGGAG
ATAGTTTGAGGCATTTCTTGCTATAACAACCTCCCTAATATTTTATCTAC
AAATAAAAATATGACTTCTTTGTAAAACACGAGCCAAATGTACCAAAAAA
GAATAGAGCTGAAGGTTTGCAGAATTTAAATTTATTCCTGCTCACTTTTT
ACTTTCTCCTGGCCGGTGGGGATTGATTTTATCAATTTAAATTATCAATT
TAAATCATGGGTAAACAACGAAAGAAGAAGAACCTTCCAGCTCAAGATGA
AGTTCAGGACACTACAGGTATTGATCTCAATAACCCAAAAAAAATAAAAT
GTTTTCCTTTTTAAAATCTCTTTTATTAAATTAAAGGCCTGCCTTAACCT
TTTTGAACCTAGGTACCTCAAGAACCTAGGTACCTGAATGCCGTACTTGA
TACATCCTGCTTCTGAATGCCGTACATGTACGCAATTTAATAGACACGTC
TTTCTTGCGCCATATCTTTTATTGGCTTGCTTGGTAATCCCCCAGGCGTA
TTAATCGAACAGTTAGATTACTAATCAAATTTTGTCGAACTTAGTCGAAT
GACAAAAGTTCGTTTAAATTCTTTAATTGAACGACAAAAGTTTGATTAAA
TTCTTCAATCAAACTTTTCAAAAGTCGCTAAAATTGTGAGTATTTAAATT
AAGTTTGACAAAACATAATATTACGACCCAATCAATCTAGAAAGTAAGGC
ATGTACGCCCCGGATAGCCTGGGAATCCATGCTATGATTTCTTCTTTGAT
AAACTGATGGCGAAATGTATAGCATGGTATGGGCTGAGAGTTTGAATTTC
TCAGATCCTAATAACGGTTGAAAACATAGCCAATCAAATTTTGCTATTCT
TTTACTGGTGACACTTTCTTAGAGAAAGCAGGAGAAAGCGCAACTTTCAA
AATTTGGTTTTTATTTTAGTAAGTGAGGACAGCCGCGCTAAATTTGAATT
TCCCACCGTAAAAAATGTGAGTCCAAACAGAGGTCCCGGCCGGGGTTCTG
CGGGGAGTTGGGTCGGTGCCCACTGGTCAGGGGATGTGAGGGTACACGCC
TGCACCGGTGGGGGTCCTTCAAAGTTCCTCAAAGTGTTGTCAAAATCCGG
CAAAAATTGGAAAATTGGCGAAAATTGGTCAAAATTGGGAAAAATGACCT
CATTTGGGTACCACCGTGGACGGCCCCTGGGGGTCCCGGCCGGGGTTCGG
GGGAGTTTGATCGGTGCCCACTGGTCAGGGGGGTGTGAGGGTACACGCCT
GCACCAGCGGGGGTGCTTCAAAGTTCTTCAAAGTGNAGTTTGATCGGAGC
CCACTGGTCAGGGGGATGTGAGTGTACATGCCTGCACCAGCGAGGGTGCT
TCGAAGTTCCTCAAAGTGTCGTCAAAGGCCGGCAAAAAGTGCCTTCAGTT
GCTTGGGTTTTCTCAAATTTTTATTTGATTAAATTTGACAAAGTTCGATT
AAGTTTGATTAAGTTCGATTAATGTAATTGAACTAATCCAACTGTTGAGG
TCTCTTTAAAAAAAGTATGATTAAGTTCAATTTCAGTAATCAAACTTTTA
AATCGAACTTTGTATTTTGAGAAATTTGTGAGTATTCGATTAAAGTTTGA
CAACCGAACTTAGTCATACATTAATCAGCCAACAAAGTTCGATTTTTAAG
TTCGACAAAGTTCAATTAAAAATATCGTTCGATTGGTTTGATTGATTACG
TCTGGGTAATCGTCCAAAAAAGACGAAAAAGAAAGTAGAGAGTCTAAGCT
TTCCCTTNTCTGGGTAATCGTCCAAAAAAGACAAAAAAGAAAGTAGAGAG
TCTAAGCTTTCCCTTGATATATAATGATGTAATGGTGCTGTGGTATAGTG
GTCATTGACCTTGGTTGTTACACAGGCGACTGAGGTTCGATTCCCACTCG
CAGCAGTTCACTTAAGGCAAGTGAATGAACCTTCCCCCGGGTCAACCCAT
GCCATAGGGGAATTGGGTAGTCAGTCCAAGGTGCTGACGGGGCGCTCATT
GAAAGCGTCTATAGTTGCAAAAAATAGGCCTCAAAGCCTCCTGCAACTCA
ACCAAATAGAAATAGAAATAGAAATGTTATTATCATATGGTGAGTCAGCA
CTTTTCAAAAATAACACTTATTCAAATGGCGGACAGAAAATCATTGATTT
CTGAGAAAAGTGACTGCTGTTTGGAAAGCCATTGTGAGCAGTAGAATGTT
TTTTAGATGCTAATTTTTGGTATAAGGCTTCAGGACTAAGTATATAATGA
TAAAATACTAAAGAAGAATTTAATAATTAAACTTCCCCCACTTTTTTTTG
CATAGGAAGTGAAAAATACCAAAAAAGTGACATTACCGAGAAATGAGGAA
AAAAACATGGTGAATAAGGAGCTACCATTTTAGTTAAAGTATTTTATTTG
GATTGATACCCAACCTAAAAGCTGCAAAATTTAACTAGCTTTTCAGCAAT
CTCTGTCCTCGAGATGATTTCTGCCATACTCTGAAAACTGGAAGATCAGC
AAGACAACCTTTGTCCTTTGACGAGGAAAGTTGCATTCAAAGTTGCAATG
ATTTGACTCAAATCATATCACTTCATGCATCAAAAGAAGCCAAAAAAAGG
TGCTGTGGTTTAGTGGTCATTGACCTTGGTTGCTGCATAGGGGGGCTGAG
GTTCGGTTCCCACTCGCAGTGGTTCACTTGGCAAGTAAATGGGCCATTCC
AGAATTTGTCTGTAAAAGGGGGGCAGACGACACGGGGTTTCCAAGGACAA
AAGTTTTCACCAAATTTCAAAATTCCAAGGCGAGAGAAGAAGATGAATGA
ATTTCCAAGGTAATTGAATTAAAAAAGACAAAAAAGAGTGGAATATCTGA
TGCATTTAGCTGAAGTACATGGATTTTCATCTGAATTTCTGACCACCACT
GGAAAAAAAAAAATATTTCCGAGGCTAGAAAAAATTTAAAAATGCAAACA
AAAATTTTCTGGAGTGGCCCAATGAACCTTTGCCCGGGTCAACCCATGCC
ATGTGAGGATGACTGGGGGTAGTCAGTTCAAGGTGCTGACGGGGCGCTAA
TTGAAAGTGTCTATAGTTGCAAAAATGAGCCGCCTCAGACAGTGTTGCTG
GAATCCCTCAGATCCTTGTTTAGAAAAAGCTATACCTGTTTACTTATTTC
TTGCCAGATTCAACAAGCCATCAACCAACAAAATTAATACTAATATCAGA
AAATTCACACGACCTTTCCACTAGACACTTCTAAATNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGTAGACCTAAAGATATTTCGCGGAGGGCG
CTCTATAAATTTCAAATCAATGTCAGCTATTTCGAAAAATAACAAAATAA
TTAATAAAGCGCGCTAGCAGTGAAAATTCATTTGTCATGGTCTCTTGTTG
CACAAATGTTGGCTCATTCGTATTGTTAAATGCTATGTCTATGGACACAA
AAATACGACTATGTGTCCTACAGATATTGTTCCAATGATTATAATATTTC
TTTATAAGATGCTTTTTGTCTTTTTAATCTTTGTGTAAACTTGCATATGT
TTTGCATATTTTTAAACTAAATCCAACCATGGTTTTTTCATTCCTGTATT
TTTACATATATAATATAACTCAATATGGCGTATGTAAAGGCGAAAAGGTC
TATACTGTTGCTAAGATGTTACCTTGAAATAAAAAATAAAACCACTGAAA
ACAAAAATAAAATAGACCCATACTCTAAATCTCATAATTTCGATATGCGA
GTTTTAGTCTAAACTGTTTGGTTATCACATTAACCCTTTTTCCCACAAAA
ACTAAATATGTGTTTTGTTGACTAAATAAACATTTTATAAAACTACTCAA
ATTATCAACGCTAATTGGTTTCCTCCTGTTTGGTGGCCATTGAAAAATTA
TTCTTTTCAAAACAATGATAAGGAAAAATAAATGCACATAAATACGCATA
AATATGCATTAATGGGTCATTGTTTTCATGCTGCAATTTTTAATTTTTCA
ACATGCCATCCCTACTAGCAAAAGGTCTATTCAAGGTCTGTGCAGGCCGT
CAAACAAAGGGAACCCGGACATGGATATCAGGTTGTCTTTTGGTTTTTAA
AGCTGCAAAGCGATCGAAAAGAAACATGGAAAAGGACAATTTGGCATGGA
ATGAACTTCTCTAAAATCGATATTTCGAGTGATTTGCATACCATGAATAA
ACATCCACCTACCAGGGCCTGAAATAACGGTGGGACATCAGAATTGTCCG
ACCCAATTGCTGGAATGTCTGACTAAATTAGATTCTGGTCAAACATAATA
TCTGTCCCATTTTCTTTTCAGTTCCCTTTAAAAATTGAATAAAGTTAAAA
GATTTGACTTAAAATTAAAATTTGAAGTTAGCAACTTCCTTTATTTACAC
AAAGAAACTCTCTGCAGTTAAAAATTTCCTCTATTCTTTGTGTCTGAAAG
CAAACAATTCATTCTTTTTCAAGTTTGCTTAAGTCAAAATCATTAGTTCC
TGAAAATTACCAAGGAGTCTGTTTACCTTCTTTGTGATCAATGCAAAATT
TTACAAGAAGCTGCTATTAGACTAAGGTATTGGGGGCCTATAAATTTGGA
AATAAATTGTGGAACACCAGGTGAATTTTCATTCATAAAATAAAGACTAC
CCATAAATTGCTTGTAAGAAACGCAGTAGGTTAAGATAAAGAGTCCTGTC
TGAGAGGGAGAAGTAAAAGGATCTTGGATGTATCACAGATTTTAGATCAA
TTTGTAGTACTTCTTCAATCTTTATATAATATCAGAGTACTTTAGCACAG
ATTAAACAATCAAAATCTTTTTCTTAGCAAACCTAATATTGTTGCTACCA
GTAAACATTTTGAAACTTTTAACTTTATTTTTCTATCATAGGTGTTCCTC
GCTCATTTGTTTTTCACCGTGGAGTTGTTGGAAAGACAGTGGTCAACTTG
GTCAACGACATCAAACATGTAATGCAGCCTTTTACAGCCTTGAATCTAAA
GGTGACCAAAAATAATGTTCTAAAGGACTTCGTTCATGTAGCTGGACCAT
ATGGTGTGACTCATTTTATCATTTTATCCAAAACAGAAAAGGCACCCTAT
TTAAAGATTTGTAGACTCCCTAGAGGCCCTACACTGACTTTTAAAGTGAA
TGAATATTCTTTAATGAAAGATGTTATTAGTATCTTAAAAAGACCAAAAT
CTCTTGATCAACAATTCAAGCACCCCAGTCTTGCAGTACTGAATGGATTC
AGTAATGAAGAAGCACACACAAAGTTAATGTCAACAGTTTTTCAAAACAT
GTTTCCTCCTCTGAAAGTTCAAAAGGTCAAATTGAGCAATATCAGAAGAT
GTAGTGTTTTTGATTATGATAGTTCTACTGGTTTGGTGGAGTTTAGACAC
TTCCATATAGAAGCCAAACCAACAGGGCTCAGTCGTGGTGTGAAAAAGCT
TTTGAAAAACAAAATCCCAAACCTCGGCAAACTTGAAGACATCAGTGATT
TTATGGCTGGTGGTGCATACCTTTCAGAAAGCGAGGGAGAAGAACCTGCT
GAGTCTCAAGTCACCCTACCACAAGCAGTGCGAGGACGTGGAAATATGAA
GTCGTCACAAAGTGCCATTAGGCTTACAGAAATGGGTCCAAGACTTCAAT
TGATGTTGCTAAAAATTGAAGAAGGAGTTTGTGAGGGAGAAGTGATGTAT
CACAAGTACGAAAGCAAAACAAAGAAAGAAATGAAGGAACTTAAAGCACG
TAAAGTTAAAGCTAAAGAAGAGAAGGATAAACGCAGGCAAGAGCAAGAAG
GAAATGTTGCACGCAAACAACAAGCAAAAGAAGATCACAAGGAGAGGAGT
TTGGCTGGCATGAAGAGAAAAATGGAAGAATCAGGGGAAACGCAGGAAGG
ATCTAGTGAAACTGTGGAGGAAAATGAGAAGCAAGATACCTCAATGAGTG
AAACAGAAGAAGAAGAACAGGAAGAAGTCGAGCTAACAAAACCAAAAAAG
AAAAAGAGAAATATACCTCCTCAACCAAAATCCAAAGCAAAACCAGCTGG
CAAGTTTAGTAAAACAAAAGGAAAGAAACATTTAAAGCATAAAAAATGAT
GTAGTTTCTACTTTTGTAAACAACTTTTTATAGGGTTTTTATATTTTACT
ATTTTACTAGATAGCATAAAAACAATCATGATATGATAAAAAAATTTCTT
AAACTATTTTCTTTGATGATAAAGACGGAGCCAGTCAAAATTCCAAGCAA
ATAGTCTCTAGCCATTTTTTATGTAGAAATTGAGTTTTGGCCTTCAGAGT
AACAGATCTAGGTGGTAAATACCTGCTTCAGGCCCCACAACTTTTTGAAC
TCCCTCAAG Coding sequence (CDS) from alignment at scaffold_268:86951..94209- >TCONS_00056165 ID=TCONS_00056165|Name=TCONS_00056165|organism=Clytia hemisphaerica|type=CDS|length=2538bp|location=Sequence derived from alignment at scaffold_268:86951..94209- (Clytia hemisphaerica)
GTGTTCCTCGCTCATTTGTTTTTCACCGTGGAGTTGTTGGAAAGACAGTG
GTCAACTTGGTCAACGACATCAAACATGTAATGCAGCCTTTTACAGCCTT
GAATCTAAAGGTGACCAAAAATAATGTTCTAAAGGACTTCGTTCATGTAG
CTGGACCATATGGTGTGACTCATTTTATCATTTTATCCAAAACAGAAAAG
GCACCCTATTTAAAGATTTGTAGACTCCCTAGAGGCCCTACACTGACTTT
TAAAGTGAATGAATATTCTTTAATGAAAGATGTTATTAGTATCTTAAAAA
GACCAAAATCTCTTGATCAACAATTCAAGCACCCCAGTCTTGCAGTACTG
AATGGATTCAGTAATGAAGAAGCACACACAAAGTTAATGTCAACAGTTTT
TCAAAACATGTTTCCTCCTCTGAAAGTTCAAAAGGTCAAATTGAGCAATA
TCAGAAGATGTAGTGTTTTTGATTATGATAGTTCTACTGGTTTGGTGGAG
TTTAGACACTTCCATATAGAAGCCAAACCAACAGGGCTCAGTCGTGGTGT
GAAAAAGCTTTTGAAAAACAAAATCCCAAACCTCGGCAAACTTGAAGACA
TCAGTGATTTTATGGCTGGTGGTGCATACCTTTCAGAAAGCGAGGGAGAA
GAACCTGCTGAGTCTCAAGTCACCCTACCACAAGCAGTGCGAGGACGTGG
AAATATGAAGTCGTCACAAAGTGCCATTAGGCTTACAGAAATGGGTCCAA
GACTTCAATTGATGTTGCTAAAAATTGAAGAAGGAGTTTGTGAGGGAGAA
GTGATGTATCACAAGTACGAAAGCAAAACAAAGAAAGAAATGAAGGAACT
TAAAGCACGTAAAGTTAAAGCTAAAGAAGAGAAGGATAAACGCAGGCAAG
AGCAAGAAGGAAATGTTGCACGCAAACAACAAGCAAAAGAAGATCACAAG
GAGAGGAGTTTGGCTGGCATGAAGAGAAAAATGGAAGAATCAGGGGAAAC
GCAGGAAGGATCTAGTGAAACTGTGGAGGAAAATGAGAAGCAAGATACCT
CAATGAGTGAAACAGAAGAAGAAGAACAGGAAGAAGTCGAGCTAACAAAA
CCAAAAAAGAAAAAGAGAAATATACCTCCTCAACCAAAATCCAAAGCAAA
ACCAGCTGGCAAGTTTAGTAAAACAAAAGGAAAGAAACATTTAAAGCATA
AAAAATGAATGGGTAAACAACGAAAGAAGAAGAACCTTCCAGCTCAAGAT
GAAGTTCAGGACACTACAGGTGTTCCTCGCTCATTTGTTTTTCACCGTGG
AGTTGTTGGAAAGACAGTGGTCAACTTGGTCAACGACATCAAACATGTAA
TGCAGCCTTTTACAGCCTTGAATCTAAAGGTGACCAAAAATAATGTTCTA
AAGGACTTCGTTCATGTAGCTGGACCATATGGTGTGACTCATTTTATCAT
TTTATCCAAAACAGAAAAGGCACCCTATTTAAAGATTTGTAGACTCCCTA
GAGGCCCTACACTGACTTTTAAAGTGAATGAATATTCTTTAATGAAAGAT
GTTATTAGTATCTTAAAAAGACCAAAATCTCTTGATCAACAATTCAAGCA
CCCCAGTCTTGCAGTACTGAATGGATTCAGTAATGAAGAAGCACACACAA
AGTTAATGTCAACAGTTTTTCAAAACATGTTTCCTCCTCTGAAAGTTCAA
AAGGTCAAATTGAGCAATATCAGAAGATGTAGTGTTTTTGATTATGATAG
TTCTACTGGTTTGGTGGAGTTTAGACACTTCCATATAGAAGCCAAACCAA
CAGGGCTCAGTCGTGGTGTGAAAAAGCTTTTGAAAAACAAAATCCCAAAC
CTCGGCAAACTTGAAGACATCAGTGATTTTATGGCTGGTGGTGCATACCT
TTCAGAAAGCGAGGGAGAAGAACCTGCTGAGTCTCAAGTCACCCTACCAC
AAGCAGTGCGAGGACGTGGAAATATGAAGTCGTCACAAAGTGCCATTAGG
CTTACAGAAATGGGTCCAAGACTTCAATTGATGTTGCTAAAAATTGAAGA
AGGAGTTTGTGAGGGAGAAGTGATGTATCACAAGTACGAAAGCAAAACAA
AGAAAGAAATGAAGGAACTTAAAGCACGTAAAGTTAAAGCTAAAGAAGAG
AAGGATAAACGCAGGCAAGAGCAAGAAGGAAATGTTGCACGCAAACAACA
AGCAAAAGAAGATCACAAGGAGAGGAGTTTGGCTGGCATGAAGAGAAAAA
TGGAAGAATCAGGGGAAACGCAGGAAGGATCTAGTGAAACTGTGGAGGAA
AATGAGAAGCAAGATACCTCAATGAGTGAAACAGAAGAAGAAGAACAGGA
AGAAGTCGAGCTAACAAAACCAAAAAAGAAAAAGAGAAATATACCTCCTC
AACCAAAATCCAAAGCAAAACCAGCTGGCAAGTTTAGTAAAACAAAAGGA
AAGAAACATTTAAAGCATAAAAAATGAATGGGTAAACAACGAAAGAAGAA
GAACCTTCCAGCTCAAGATGAAGTTCAGGACACTACAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056165-exon-scaffold_268-1575043694:93743..94209 | TCONS_00056165-exon-scaffold_268-1575043694:93743..94209 | Clytia hemisphaerica | exon |
| TCONS_00056165-exon-scaffold_268-1575043694:86951..88418 | TCONS_00056165-exon-scaffold_268-1575043694:86951..88418 | Clytia hemisphaerica | exon |
| TCONS_00056165-exon-scaffold_268-1510915933:93743..94209 | TCONS_00056165-exon-scaffold_268-1510915933:93743..94209 | Clytia hemisphaerica | exon |
| TCONS_00056165-exon-scaffold_268-1510915933:86951..88418 | TCONS_00056165-exon-scaffold_268-1510915933:86951..88418 | Clytia hemisphaerica | exon |
| TCONS_00056165-exon-scaffold_268-1491911889:93743..94209 | TCONS_00056165-exon-scaffold_268-1491911889:93743..94209 | Clytia hemisphaerica | exon |
| TCONS_00056165-exon-scaffold_268-1491911889:86951..88418 | TCONS_00056165-exon-scaffold_268-1491911889:86951..88418 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_268 | supercontig | scaffold_268:86951..94209 - |
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00056165 vs. Swiss-Prot (Human)
Match: SSF1 (Suppressor of SWI4 1 homolog OS=Homo sapiens GN=PPAN PE=2 SV=1) HSP 1 Score: 341.658 bits (875), Expect = 2.102e-109 Identity = 174/349 (49.86%), Postives = 243/349 (69.63%), Query Frame = 2
Query: 410 GKQRKKKNLPAQDEVQDTTGV---PRSFVFHRGVVGKTVVNLVNDIKHVMQPFTALNLKVTKNNVLKDFVHVAGPYGVTHFIILSKTEKAPYLKICRLPRGPTLTFKVNEYSLMKDVISILKRPKSLDQQFKHPSLAVLNGFSNEEAHTKLMSTVFQNMFPPLKVQKVKLSNIRRCSVFDYDSSTGLVEFRHFHIEAKPTGLSRGVKKLLKNKIPNLGKLEDISDFMAGGAYLSESEGEEPAESQVT-LPQAVRGRGNMKSSQSAIRLTEMGPRLQLMLLKIEEGVCEGEVMYHKYESKTKKEMKELKARKVXXXXXXXXXXXXXXGNVARKQQAKEDHKERSLAGMKR 1444
G+ R +K AQ ++++ P SFVF RG G+ + L D++ VM+P TA L+V K N LKD V VAGP GVTHF+ILSKTE Y K+ RLP GPTLTF+V +YSL++DV+S L+R + +QQF HP L VLN F H KLM+T+FQN+FP + V KV L+ I+RC + DY+ + ++FRH+ I+ P G SRG+KKLL+ K PN+ +L+DIS+ +A GA LSESE E + +T LPQAV GRGNM++ QSA+RLTE+GPR+ L L+K++EGV EG+VM+H + SKT++E++ + K K K +R+ +Q NV RKQ+ +E H+++SL GMK+
Sbjct: 5 GRSRHQKRARAQAQLRNLEAYAANPHSFVFTRGCTGRNIRQLSLDVRRVMEPLTASRLQVRKKNSLKDCVAVAGPLGVTHFLILSKTETNVYFKLMRLPGGPTLTFQVKKYSLVRDVVSSLRRHRMHEQQFAHPPLLVLNSFGPHGMHVKLMATMFQNLFPSINVHKVNLNTIKRCLLIDYNPDSQELDFRHYSIKVVPVGASRGMKKLLQEKFPNMSRLQDISELLATGAGLSESEAEPDGDHNITELPQAVAGRGNMRAQQSAVRLTEIGPRMTLQLIKVQEGVGEGKVMFHSFVSKTEEELQAILEAKEKKLRLKAQRQAQQAQNVQRKQEQREAHRKKSLEGMKK 353
The following BLAST results are available for this feature:
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