TCONS_00056081 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056081
Unique NameTCONS_00056081
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2429

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056081 ID=TCONS_00056081|Name=TCONS_00056081|organism=Clytia hemisphaerica|type=transcript|length=2429bp
CGACTCCATGTTTGATAAGTTGTCGGTGGTGAATGTTGATAAGATCGTCA
ATCTCCAATGACCGGCGTTTGTTTTGGTAATCGATCGTCTTTTAGTATAT
TCTATTGTATTCCTTGGTGGTTGATCGTCTGAGACATTAATTGATCATCT
GTTTGAAGTCCAGGAAGAAGCGCTCGTCCGATTGTTCCAATGtcataaaa
gtaaagaaagGTTGACCGGAGTATACAGGGGCTTATGGTTAAATATAGTA
CgagaaaatctggaaatttcgGAGAAGTTTGCTAAAGTATGTTAAAATGT
GATTTGAGTGAATGCAATAGCGAGGATGATTTAgaattttgaattgtatt
taaNAGAAGTTTGCTAAAGtatattgaaatgattttgagTGAATGCAATA
GCGAGGATGATTTAgaattttgaattgtatttaaAGACATACGAATCATA
ATTATGATTTAATGATGCGCATGCATAATTAATTTTCCGTGCGAAcctgc
ttttccagcttttttcaaTCGCTTGAAACATCGTTTCTCCACTATTTCTC
CTTTTCGAaatgaaacaaacaataaaaaacgATAGTTGTTTCTACTTTTT
GTTTGGTATTTGCTTGCATTACcacgagaaagaaaaaggaagtcGGAATG
CCTAAATCCCTAAAGAACGGAAAATTTATAACGCTTTTTGGCATTGTCTT
TGATATACGTGTTTCTGCTAGTGTTCGATGACCAACGACCGTGTTTTGAA
ATGAGACGGTCCGAAATACCATTGTTTGCTGCCTCTGATGCACCTCCTGA
TCTTAATGAGTGCAAACCGTAAATGGAAGGATTGGTTACTTTTGAAAGAT
GATCGTTGAAAGTTTTCAAAGCGGTCGTGTAGGATATCGGAAGAAGACCA
TGGGCATTGTGACCTCTCTTTGTTTTGTAAAGATGAAGAATTAGGTAAGC
CTCGGGTTTGTAATTTAATTTGGATAGTGACAAATATTTGCGAAGCCAGT
AAATTGGGCAGCATTTTGTTCCTGTCTTGCTAATGAAAACGATATTACCT
TCACGAACTTGGTCGGTTTTTGAATTTGGTAGAAAAGCTGTTGCACCGAA
ATTGTCAAAAGTGATTTCCTTTATCTGAATTTGAAGGATTTCGCTAATTC
TGAGAAGTCCTGCAAAACCTCTAGAATGACCATGAGAAGAAAGCAAATTT
CGACTAAATTTGTTGAAGTGAAATATGTTTTTGCGAGGTTTCTAATAAGC
TCTGAAGGCAAGGGCTCCTTTCGGCGGTGTCTGTCTGATGGGGATCGCCT
CTCTGCAATGATGCGTTTACCTCCTTCGAGTGCTAACTTAACAAGTTGGT
GATCTGTCGGAGAATCAAAACCTGAATTCAAATGTCCCCACCTTATGCCC
AAGATTGCTGCTGTCAGTGCGCCTTCGGTTGCGAAAGAATTTGTGAGATC
GTTTAAGTAGATGGCGACGTAAAGNTGTCCCCACCCTATGTCCAAGATTG
CTGCTGTCAGTGCGCCTTCAGTTGCGAAAGAATTTGTGATATCGTTTAAG
TAGATGGCGACGTAAAGTAGATCCGCAGGACAACTGTTTATTTCTTCGAA
GGGGTCGGCCCAAGATACCCATTTCTCCCATGCTGGCTTGTATTTTCTCA
AAGTAGATTTTGCGTAAGCTGCTTCTAATAGGGTAGGTAGACTTTCGGCT
TTCCGTTTGAGgcttttatttttaattgcCATTAACTTCTCTTTCAAACT
TGGAGCGTAATTATCTTTCGGAAAATTTAAAGTGCAATAATTTAAGTCAA
GAATTATGTTACCTTACGTCTGCGAACTTGAATTCAAGGTAGTAATCAAT
CATCAACTGGAGAACGATTGCTCCTTCAAGTGCGTTGCACAGGGGCATTG
ACGCGAAAGTTGTGTTGCACAGGGGCATTGACACGTCAAAGNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTTG
TAGCACAGCGAGAACGATTGCTCCTTCAAGTGCGTTGCACAGGGGCATTG
ACGCAAAAGTTGTGTTGCACAGGGGCATTGACACGTCAAAGGTGTTGCAC
AGCGGCATTGACACGTAAAACACATTTGTAACGGAGACAGTGATGTGAAG
TAAATTCGTCTTGCAACGGGGCGTTAAAGTTGTCACCATCCAGCAACGGA
GACGCTTTCGGAAGATTGCTCAAATTCCCAAAATCTCTCTGGAGAAGcga
aaaaacgaacaaaaactTGATATCAAATTGGCGAAAGTTATTTGGAAAAC
AACGATgttacaaaatttgaaattactgTCTTTTGATTAAAGTACATCAA
ACACAATAAATTCAATTGTTcataaaagataaaataataCTAAGGAAAGT
CGTTTGAATTATAACGCTTCAATTTTTCA
Run BLAST on NCBI

transcript from alignment at scaffold_267:528931..541724+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056081 ID=TCONS_00056081|Name=TCONS_00056081|organism=Clytia hemisphaerica|type=transcript|length=12794bp|location=Sequence derived from alignment at scaffold_267:528931..541724+ (Clytia hemisphaerica)
CGACTCCATGTTTGATAAGTTGTCGGTGGTGAATGTTGATAAGATCGTCA ATCTCCAATGACCGGCGTTTGTTTTGGTAATCGATCGTCTTTTAGTATAT TCTATTGTATTCCTTGGTGGTTGATCGTCTGAGACATTAATTGATCATCT GTTTGAAGTCCAGGAAGAAGCGCTCGTCCGATTGTTCCAATGtcataaaa gtaaagaaagGTTGACCGGAGTATACAGGGGCTTATGGTTAAATATAGTA CgagaaaatctggaaatttcgGAGAAGTTTGCTAAAGTATGTTAAAATGT GATTTGAGTGAATGCAATAGCGAGGATGATTTAgaattttgaattgtatt taaNAGAAGTTTGCTAAAGtatattgaaatgattttgagTGAATGCAATA GCGAGGATGATTTAgaattttgaattgtatttaaAGACATACGAATCATA ATTATGATTTAATGATGCGCATGCATAATTAATTTTCCGTGCGAAcctgc ttttccagcttttttcaaTCGCTTGAAACATCGTTTCTCCACTATTTCTC CTTTTCGAaatgaaacaaacaataaaaaacgATAGTTGTTTCTACTTTTT GTTTGGTATTTGCTTGCATTACcacgagaaagaaaaaggaagtcGGAATG CCTAAATCCCTAAAGAACGGAAAATTTATAACGCTTTTTGGCATTGTCTT TGATATACGTGTTTCTGCTAGTGTTCGATGACCAACGACCGTGTTTTGAA ATGAGACGGTCCGAAATACCATTGTTTGCTGCCTCTGATGCACCTCCTGA TCTTAATGAGTGCAAACCGTAAATGGAAGGATTGGTTACTTTTGAAAGAT GATCGTTGAAAGTTTTCAAAGCGGTCGTGTAGGATATCGGAAGAAGACCA TGGGCATTGTGACCTCTCTTTGTTTTGTAAAGATGAAGAATTAGGTAAGC CTCGGGTTTGTAATTTAATTTGGATAGTGACAAATATTTGCGAAGCCAGT AAATTGGGCAGCATTTTGTTCCTGTCTTGCTAATGAAAACGATATTACCT TCACGAACTTGGTCGGTTTTTGAATTTGGTAGAAAAGCTGTTGCACCGAA ATTGTCAAAAGTGATTTCCTTTATCTGAATTTGAAGGATTTCGCTAATTC TGAGAAGTCCTGCAAAACCTCTAGAATGACCATGAGAAGAAAGCAAATTT CGACTAAATTTGTTGAAGTGAAATATGTTTTTGCGAGGTTTCTAATAAGC TCTGAAGGCAAGGGCTCCTTTCGGCGGTGTCTGTCTGATGGGGATCGCCT CTCTGCAATGATGCGTTTACCTCCTTCGAGTGCTAACTTAACAAGTTGGT GATCTGTCGGAGAATCAAAACCTGAATTCAAATGTCCCCACCTTATGCCC AAGATTGCTGCTGTCAGTGCGCCTTCGGTTGCGAAAGAATTTGTGAGATC GTTTAAGTAGATGGCGACGTAAAGNTGTCCCCACCCTATGTCCAAGATTG CTGCTGTCAGTGCGCCTTCAGTTGCGAAAGAATTTGTGATATCGTTTAAG TAGATGGCGACGTAAAGTAGATCCGCAGGACAACTGTTTATTTCTTCGAA GGGGTCGGCCCAAGATACCCATTTCTCCCATGCTGGCTTGTATTTTCTCA AAGTAGATTTTGCGTAAGCTGCTTCTAATAGGGTAGGTAGACTTTCGGCT TTCCGTTTGAGgcttttatttttaattgcCATTAACTTCTCTTTCAAACT TGGAGCGTAATTATCTTTCGGAAAATTTAAAGTGCAATAATTTAAGTCAA GAATTATGTTACCTTACGTCTGCGAACTTGAATTCAAGGTAGTAATCAAT CATCAACTGGAGAACGATTGCTCCTTCAAGTGCGTTGCACAGGGGCATTG ACGCGAAAGTTGTGTTGCACAGGGGCATTGACACGTCAAAGNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAAGTTG TAGCACAGCGAGAACGATTGCTCCTTCAAGTGCGTTGCACAGGGGCATTG ACGCAAAAGTTGTGTTGCACAGGGGCATTGACACGTCAAAGGTGTTGCAC AGCGGCATTGACACGTAAAACACATTTGTAACGGAGACAGTGATGTGAAG TAAATTCGTCTTGCAACGGGGCGTTAAAGTTGTCACCATCATAAAATAGA ATAAAGTAAGAATTTGTTAAGATCTTGCTCAATAAGTTTGCACAATATAT TATGCGGACATGTCAATAAATAACGCCAAAGAGTAAAAATTTGCAAAGCC GTCAAAAACACAATCGGTGTTTGAATAATTGAAAAAGAAAGGATCAAGCA CTAGAAAATGTTTTACAAAAGGTTCAAACTCGAAACCGTTTGATGTCAAT AAAGGCCAGTAGTATGCTGATGGCCACAAGGGGATAAATAGTATGCCTTT ACCTTTACAATTTCTTAAATGTTTAATTGTTTTGCCTACTAATGTTGAGG GGGACAAAGCCAATTAATTTCATGGTTTCCCCAGTGGCACGAAAAAGAAT TAACTGCAGAAGTACCAGGACAATATTCTTTGGAGTTAAaccgaaaacat tttttatttaaattgtcTGAAAATCGGTCGATGGTAATTTGTCCGTAGTT TTTAAGTATACAAtcaaaagtttcattgtcaattgACCAGTTGTCTGTAT CGTTGGTCTTTGAAATTATATCGGCAATTTCGTTTAACTCTCTAGGGATC CAAGTAGGGTAAATTTCGATGTTGGACGATAaacaaatgtttaaaatttt gattgcaAGATTTTGCAAGTGTTGCTTTGTGCTACCTCGATTTATGATTC TACATATATTATTGTTGTCGGTAAACCACTCAATGTTTTCGTTTTCTAAG ATTTTAGGAAATGATAGCAAAATGTATTTTACTGCAAGAAGTTCGCGGTA AGTCGANCGTTTTCTAAGATTTTAGGAAATGATAGCAAAATGTATTTTAC TGCAAGAAGTTCGCGGTCAAAGTTCCCTTTCGCTATGATGTTACCGAGTT TTTCCGCAACATAACCCCCGTAACCGGTTTCGCTTGCATCCGAAAAAACG ATTTTTGTGACTTCAGGTTGTGTGTTAATTCTAAAGCTCTTCGTGACTTC TAAATTGTCTTTCCAAAATTCGTNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNCctaacctcccgcaaaaggaccaccagatcataccgccagga ggaaggaacccaaactaagctaacaataaattaataaataaactaataaa tggaaaataaaaactaactacagaggataaatactaacagaaatgaaaaa acaaaacaaaaagagctaggagagcagttagagtaaagactaaaataacg gtcccccaaaacgaCTTGTATCACAGATAAATTTGATCGTTATgctcaat atatcatgattttggacaatGCTAAAATCGGGgtcgccataaagaagtat tctacacaatgttttgggattaaatggaaacaaggttatgtcaagttgaa gaaggctgtgGAACATCACAAGTCTGTCGTTACagtaatcagagcaatgc atcagAAAATGTTGCGTTGTTTCTACTGAAATTTGTCGACAGTTGCAGAA GGGGTCAACTGTGTCTGCAAAATTATGTCTGAACTTATGCTcacgaagat gactgaaaccaacccttaatcggttaagAAGATCAACGCCATCGTTGTCG CTAGCTCTGAAAACTGAGTTAGTAATGGGTCTGAGGAATTGGAGAATAGC TTGCTTGAAAGACTTAATAGTGGGAAGATTTCGTATATGATCTCCGaggt tattccattcatttatgCAAAATGGAAAGAAAGAAGCACGATAACGCCCG GTTCTACAGAAAGGTACCTCGAGTGTTGGTTTTATCCTTCGCCCTGCATT GCGCTCTTCCTCTCTGGGGAGGAAGAATATTCGTAAGATAAGCAGGAGCA AAgccttttattattttataaaaaaatacgagtCTTCTAATTAATCGCCT GTCTGCCAGGCTTTCAAAGCCTAGCTCAAggtaaattttttctctggatg cTCCTCTGAAGCATCCAGTAATTGCAAGACAAGCATCATATTGAACAGAc tcgattttttcagaaaatgtagaATTACCAGGACGATCATATACGATATC TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNCACTTATCTTCTGCATGCCACTGTTCAGTTC TTGAGAACAGCGAATATGGTCTAGGATAAGCGAAAACAAGGATGAGccat cagcaaaaattttgatcatggAAATGATTCCTTCAGGGAGGTcattaatg taaatcaaaaaaagAGGGGTCCTAGAATAGATCCCTGAGGTACACCGGCC AAGACTTCCGTCCATTCAGAAGCTTGACCATCAAGAACAACCCGCTGCCG TCTCCCGTGAAGAAAATTATGGATTAATAGAAGAAGGGAGCCAGAAACac catatgacttaagtttgaaaattaaaccatcatgccaaactctgtcaaaa gctttggaaatatcAAGGAACACTCCACGAGTATCTNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNCAGCCGTCATCCATACCGCATCCTTATTCCTGATGGTAATGAC TTTATTAGGCACAAAGTTTGACATAATATTAATGATGGTTTCAGTCAAGA GGAAGACCCTGCCATCCATATCAgtaccctcaaaacacctatcCCAGTCA ACTATGTCTACAGCCCTTCGTATTAGAACGGATTCTGCTCTGGAGAAGTC CCAGACCTTTCGTTCATAAGATGGAGTGAAggggattttaaaatttagct TGCAAAAGGTTATCTGGTGATGGCACTTAGGGTGCAAGGATGGGAGGATA CCAGTATCCAGAATCAAATGATCAGCTGATGAAAAAATTAGATCAATGCA AGAAGTTGAATTATCAAGAGATGAGTAGGCCCATCAATTAATTGTTGCAG ACCATGCTGGGTagctaaattttgaatttctctaCCTCCAGGATCGGTGA CGTCACCGCTCCACCAGTCAGAATTCTTGACATTGAAATCACCAAGGAAG ATTGTAGCAGTAGGAGAAAAATTCTGGATATTTATTATAGTCTCCTCCCA TTTGCGAGAAAAAACATCGAACTCATCAGAAGTCTGACTGGGGGAACGGT AACAGACGCAAAAAAAGAACCGGTTCGCACCGGTTTTCATCTCAGCTACA AGACATTCGTCCAAAGTAGTAAGTTGTGGTTTCACATCGAGACCTAGATG ATCTCGATAATATATACAAACACCACCTCTCTTATTATTAGAGGGATGGT CGCATCTTTTGATCTCATAATTATNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTCGAATTTATGAATGTT CAGAAATGCAGAAAGTTGTTTAATCTTAATAAAATCTCCCATAGAATCTT CAACCCAAACGCTATTCAGATTCCAATGACAAATGCTTAGCGTGGTTTTC CTCTCCGGCCCAGGGTTAACCTCAATATCTCCGGACAAAAGAAGGCATAA GAATATGAGTGTAAAAGGGAAATTTATTAAGATGAAAAAACTACAGGAGG GGTTAAGCATACGATATTTTAAGCGTAATATATTGAAATATCCGATGCAT GCTCTGTATTGACTAAGACTTACCCCCATGACAAACTCCTATCAACAACC ATCAAACAACATTACATAAGAAATTTGCTCTTAATGCTCTCCAAgccaaa aattaaaacaaaataagaaaaagataaTCCCggaaaaagttgtaaaaaga gaaaagaaatgcTTAATGCATAAAGAATCATAATAGAACAAAgggcgcgt tcacactggaaggtttccttaattaaatctatcaaagttaaacaaagaga tttatgatggatgaatacactggtttattacaNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNgttatcgctaaaatataagaacgttctccatcacacag gcttattacaaaaaggtagttacaacgtataaattaatcgtaatgacaaa gaaaaaagaggtacaatacaattttgtgaacacgcacataaaactttcta ctcaatcgcatgttcaaactcgatactttaattagggacaccctgtacat cacttgaaatccgcaaacatatttgttctaatggttttactcattaactg cattcatcttacacatcaacaacaccgtttgcactatttctaattttttc NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNtacgcgttcgactctttgttaaatgcacgttctgtattgtagtc aacaaaagattctcctaactacatttttattaaggaaggtctgtagtgtg aacacgaccaaAGATTCTTGAAAACATACttaataaaatatttaattACC TTAGTCATAATGACTAATGTGTCAAGTGTAACACGAAAGTTCACAATATT TcagatgtaaacaaaaaaagagCGGATTTTGAGACATATTTTTGATCAAG AGAAAAACAGAAAGTATACATTTTATACATGTATAAGTTATGTTTTGAGT TTTTGATCAATACGGAAATTTGAAGTCAGGAAGAGCGTCCGTCAAATCAT CTTCATGCAAAATGTCAACATATGCATTCGAGTTCAGTTTTTTAATTCTA ACCATACCATTTCTTGTGGCCACATTTTGAATCAAACTGGCACTTTTTAG CATCCCACATCGCCCACGAATTTTCTTGTTCATAGGACATAAAGTTTCAT TTATGTAAATGTTAGCTGGGAggttagatttatttttgaagatttttgca accattttcctgttagaaAACTTGACTATAACATTCTTCCGTCTACCATA CCTATGGCATGCCTGAATGTCTTGTTCAGCATTGACATTGACATTGATTC CTTCCAAGATCTCGCAGACCTTACCTTCAAGCCCATCGTCCTGGATCTCA TCACTCACCCCAGTAATGTCCAAACATTCCCTCCTGCTATATTGTTCAGC TTTCAAAATGTCCGATTCAAGTTGCCTAACTCTTCCCTGTAGTAAATTGG AAACGTTTTGAGCTACAGCAGCAACAGCTTTGGATTCATTGAcaactttc tcaaaattttcaatttttgtgttcAAAACTTTTAACTGTTCTTGTATGGA TTGCTGTTGTAGTACAACTTTTATCAACGAGTCTTTATTCAGCTTTGAGA GTTCCTGTTCTGTGTAAACATGAGCAACTTGATTTTCTGCCATGATAATC CAAAAAACAAGCAAATCCAAgtatataaattaaaaaaaatcagaagTCAA ATTCGAACACTTCAAGTCTCACACCCACTTTAAAAAACTAGCATGCGCAT ATCCTCACGCATAACTACTTACATTAGGTTCCAGTGGTGTGCCGTTGGCA CACGAGCTCTTGTCTTACATCAAATGTTAGGAGACATTTTTTGTCCCAAG AGAAACTGGATTCGACAAATTTGTACAATTGCtttgtaaataaataaaca agtGGCCCGATAGCTTGTGCCATAGAAATAAGATTTCCTGCTATTCTAGA AATTTCTCTAGCTGAAATAAATTCACAATTTAAAGCTTCTAAAAGTAAGT TTTGgactttcagaatttttgttaTTGGGacttcaaatttcattttttca gtcTCGATTATGAAACCTAgccatgtttttcttttttcgggTTCGAGGCT CGACTTTTCAAAGTTTACAGTCAAACCAGCTGATTGCATGTCTTGCAGCA TCCTATCTCTTGATCGAATCAAAGAAAAATGTGAACTATCCCCAGCTATA CCGTCATCAAGATACCTCGCGCATTTAATTCCCATCGAACGCCATCTCTT TACTAATTGTCGCAtgagctttgtaaaaactaaGCATGCTATATTTAACC CAAATGGCAAAACTTTGAAcacaaaaaattgcattttaccGTCGAATTCC CATGCGAATCCCAAAAAGGTTCGAAAAATATGATTGATNATTGCATTTCA CCGTCGAATTCCCATGCGAATCccaaaaagattcgaaaaacAGGATTGAT CGGTACATGATGGTATCCACTTTTGAGGTCGAAAGTGATTAAAAAATCGT TCTGGTCGATTAACTCTGAAGCTTGTTTTAAATTTtcgtatttgaatttt tttggttTGATGAATTTATTGACGTGTCTGAGATCTAATACCAACCTAAG CTTTTTCTGCTACGGTTAAGGGGTTGATGCAGTAGGTTGGCTCCGCTACT TTTTCAATACAGCTGTCttccaaaagttttttgatactgTCTTCGACAAA ATGGTCGTTCTTTAAACTGGACGCATTGTTCTTAGCGTAAAAAGGTGGTG GGTTTGATTCAAAGGGTATTTTATAGCCTTCACGTACGACACCCAGGGCG AATTTTGATgctttcaaatctttttcccAAAAGTgcgaaaatttcattat cttaCCAGCAACGGAGACGCTTTCGGAAGATTGCTCAAATTCCCAAAATC TCTCTGGAGAAGcgaaaaaacgaacaaaaactTGATATCAAATTGGCGAA AGTTATTTGGAAAACAACGATgttacaaaatttgaaattactgTCTTTTG ATTAAAGTACATCAAACACAATAAATTCAATTGTTcataaaagataaaat aataCTAAGGAAAGTCGTTTGAATTATAACGCTTCAATTTTTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035293XLOC_035293Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056081-exon-scaffold_267-1491911889:528931..531120TCONS_00056081-exon-scaffold_267-1491911889:528931..531120Clytia hemisphaericaexon
TCONS_00056081-exon-scaffold_267-1510915933:528931..531120TCONS_00056081-exon-scaffold_267-1510915933:528931..531120Clytia hemisphaericaexon
TCONS_00056081-exon-scaffold_267-1575043694:528931..531120TCONS_00056081-exon-scaffold_267-1575043694:528931..531120Clytia hemisphaericaexon
TCONS_00056081-exon-scaffold_267-1491911889:541486..541724TCONS_00056081-exon-scaffold_267-1491911889:541486..541724Clytia hemisphaericaexon
TCONS_00056081-exon-scaffold_267-1510915933:541486..541724TCONS_00056081-exon-scaffold_267-1510915933:541486..541724Clytia hemisphaericaexon
TCONS_00056081-exon-scaffold_267-1575043694:541486..541724TCONS_00056081-exon-scaffold_267-1575043694:541486..541724Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_267supercontigscaffold_267:528931..541724 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.11144 4.7986 0.286651 0.692906 0 0 0 0 0 0 0 0.239244 1.82596 1.49023 1.18697 0.390718 0 0.544636 1.89649 2.88923e-06 0.539886 0.199497 1.82151 1.24724 0 0.845179 3.1147 0.974801 0.958097 0.707526
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056081 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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