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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055974 ID=TCONS_00055974|Name=TCONS_00055974|organism=Clytia hemisphaerica|type=transcript|length=116bp
ATAACTTTGGGTTTCTCTGAGATCTTGTCATCAAGGAATTGCATCCAATC
TACCGCGTTATCATCGGGTACATTTCGGTCGAGTGATTTCAATTGTCCAA
GTAAACCATTCCTAAT Run BLAST on NCBI transcript from alignment at scaffold_266:82000..83742- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055974 ID=TCONS_00055974|Name=TCONS_00055974|organism=Clytia hemisphaerica|type=transcript|length=1743bp|location=Sequence derived from alignment at scaffold_266:82000..83742- (Clytia hemisphaerica)
ATAACTTTGGGTTTCTCTGAGATCTTGTCATCAAGGAATTGCATCCAATC
TACCGCGTTATCATCGGGTACATTTCGGTCGAGTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNATAAAAGAAGAAAAAGCTTTTTTGAT
AGCAATATGAGATAAAAAACAATCCACTGATCTCTTTTTAGACGGGAACC
TCTAAACTGAGAACTGGAGTGAAATTCGAACTCTTACTAAATTCTTGATA
ATATGAAAAGAGAAAAAGTACCATCTAACGAAGATCATTAAGAGAAAATG
CAAATTCCAAAGGGACACTTTTTTGACCTGAGCTTTAAAACTTCTAATGA
GCCAACGAGGTAGTGCCTCGGCTATTTTAGGGTTTTAGGTTTTAGGTAAT
TTCCGTTCATATAGTTTTTTCTCATATTTTAGTTTTACTAACACGCTTCA
ATATTCCTGCTGGAAATTACTTTCTTGATCATAATACTCTTGACAAAAAA
AATCAAATTTAACTGCTTTATAACCCAGCTGAATAATCTGATTAAAGTGG
CGGGGAAAAGCAATGTTTGAAAAATCAATTTTGCGTATGCTTTTAAAAAC
ATACTGTCATAAAAATATTCCACTTCATTTGTCTTTTGGTCGTCAATTTT
GATTATACGTTGGACAACTTTCCTCCCATTCTTGCAGTACTCTGGTAATT
CATCCAACAAATTTTGGACGTGTTCTTGATACATTTTTTCTGTTTCGTCA
TCATCAAACTGGACATCGAACTCCACTTTCATGATTAACGCTTTGTCACA
ATCCTCTTTTTCAATTTGATCCGTTAAATCAATCCAATAATTATATTCGA
ATGTTTTCTCTTCCCTCCATATGATTCTTCTTGAAGGCAAAACAAATTTA
TCAGGTTCAAAGACTTGACAGTATGTTATAACTTTGGGTTTCTCTGAGAT
CTTGTGATCAAGGAATTGCATCCAATCTACCGCGTTATCATCGGGTACAT
TTCGGTCGAGTGATTTCAATTGTCCAAGTAAACCATTCCTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055974-exon-scaffold_266-1575043694:83672..83742 | TCONS_00055974-exon-scaffold_266-1575043694:83672..83742 | Clytia hemisphaerica | exon |
| TCONS_00055974-exon-scaffold_266-1575043694:82000..82044 | TCONS_00055974-exon-scaffold_266-1575043694:82000..82044 | Clytia hemisphaerica | exon |
| TCONS_00055974-exon-scaffold_266-1510915933:83672..83742 | TCONS_00055974-exon-scaffold_266-1510915933:83672..83742 | Clytia hemisphaerica | exon |
| TCONS_00055974-exon-scaffold_266-1510915933:82000..82044 | TCONS_00055974-exon-scaffold_266-1510915933:82000..82044 | Clytia hemisphaerica | exon |
| TCONS_00055974-exon-scaffold_266-1491911889:83672..83742 | TCONS_00055974-exon-scaffold_266-1491911889:83672..83742 | Clytia hemisphaerica | exon |
| TCONS_00055974-exon-scaffold_266-1491911889:82000..82044 | TCONS_00055974-exon-scaffold_266-1491911889:82000..82044 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:82000..83742 - |
Blast
The following BLAST results are available for this feature:
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