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Overview
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055963 ID=TCONS_00055963|Name=TCONS_00055963|organism=Clytia hemisphaerica|type=transcript|length=12730bp protein sequence of TCONS_00055963-protein >TCONS_00055963-protein ID=TCONS_00055963-protein|Name=TCONS_00055963-protein|organism=Clytia hemisphaerica|type=polypeptide|length=2505bp MIGKRCIPTKPNGRLRRTNQLIQEGSDVSILYDVTDERFPDLKDNDVIKYRun BLAST on NCBI transcript from alignment at scaffold_266:658862..672650+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>TCONS_00055963 ID=TCONS_00055963|Name=TCONS_00055963|organism=Clytia hemisphaerica|type=transcript|length=13789bp|location=Sequence derived from alignment at scaffold_266:658862..672650+ (Clytia hemisphaerica) Coding sequence (CDS) from alignment at scaffold_266:658862..672650+ >TCONS_00055963 ID=TCONS_00055963|Name=TCONS_00055963|organism=Clytia hemisphaerica|type=CDS|length=15036bp|location=Sequence derived from alignment at scaffold_266:658862..672650+ (Clytia hemisphaerica) Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Position
The following features are aligned
Expression
Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Values :
GrOo_1 GrOo_2 FGOo_1 FGOo_2 EG_1 EG_2 P1_1 P1_2 P2_1 P2_2 P3_1 P3_2 PoPr_1 PoPr_2 St_1 St_2 GO_1 GO_2 PH_1 PH_2 BMF_1 BMF_2 MMF_1 MMF_2 M_1 M_2 GEC_1 GEC_2 GEN_1 GEN_2
Annotated Terms
The following terms have been associated with this transcript:
Blast
BLAST of TCONS_00055963 vs. Swiss-Prot (Human)
Match: SACS (Sacsin OS=Homo sapiens GN=SACS PE=1 SV=2) HSP 1 Score: 498.819 bits (1283), Expect = 7.666e-141 Identity = 669/2780 (24.06%), Postives = 1155/2780 (41.55%), Query Frame = 3
Query: 4749 AVRLPPWFKNLIQKLGFDDQIKSKEVSFQQLL-QLFSENVEDRGLPKEIREGIINYLLSKSILHRTSMIG-KRCIPTKPNGR-LRRTNQLIQEGSDVSILYDVTDERFPDLKDND------VIKYLQTHGMEAGGLSWTKILDRAQTV------EQSANKERGSALLRIISKKLERKDFPATQSDVEACNQLKGTKFLPVMKKPKKCLFNKWHGSTAK---VSSPKEIYPHSFSNTLSCSNYICSE---------KMDDSVVKLFQIKVTPRQEDLATQLNEFLPKFKTTDFKYRDALKEITILY-SEAEVKEETRLF-----LSQAKFIMADNGQLYSADTMFLQVDHIITGKLHSIHGSYKDMKESERVQELFFNVGVKPKATATDYATALKGLWEEYNNNRLTK--FHI------DEIYHLLPVLADFEEKHLFIDDLY----LPDQQNILRKTSELCYNDVTWLP-NDPDVHYSNSEISHQHAIQLKIKSRRSDYILRGKHIDDTPWIDDSQVTT--ESFGQYDNLTARIKRLIENYSDPFDILKETIQNADDAESNEIEFILDKRSHGTEKVISEKWEHLQGPGLLIVNDGKFTTEDLQGIQKLGVGSHKNDPLKTGKYGVGFNTVYSLTDCPILLTKVDGTEDRMCMFDPHRKYAEGATDKRPGCSFPDART-FLDPYDDVKSAFLFNEEDKETKTILRLPFRMGDTAKDSEISTTSVSIKTIEKTMKGFLEHADEFLLFLNNIKTIKI-RIVNGEGEKDELFSVHSKLYDTLPSTVDSFKVSAKGFADRFGDIYSMIDSEMQLHRKHCIRHLKDDKVQHATH-------------WDVFEQVGFSSFDDLPDSVKDTLESQTHHLVPKGGIAKLSSKDDCVECDREKCSKNTSYTKLKSLFCTLPINLETGISGIINGNFFLDSDNRRALY---NGEDKNKEWNQSILNHCVLPCFISHL-EFVKKHIEGKFNLQKVERKPDPK-SQQNEQPDDIFLEKCLRRISINNFLSLFPSTEESTDKYFKIFTKAFYMRITDKGNRLLPVHRPGDVK----------FW-------SPREFL-------LFEGKDSSCNLL-------NVMKMANLKVDVLPDPIIKDFSESGNKH------DYSLTTATPTVVRELL----NRENRLVFFKDGMEHSKSSLKTVENINTLLSFCLKKENDKRHSNPKNSKMDSDTPPKADEKAPSIDLTGLPLCLLQDRTLKSFNSK-PAFLTKYSTLFNEEKSRFMHKSSFSTLSQEHIEHSCFKEFDLHQFKDMLQNSTFNDLLKDSKIGDKDCKVNEFKAWIKNCWELIESCFHXXXXXXXXXXXXXXXXXXXXXXXGKDKTKEVKVDYLENQLDIIKDVPLLLVKKGTKES----------LLPIENRKKILGPDHNNNKIYDFITKACGGFEVV---TCYKQTKQDQDTYCHQIYSRTMLGRMFGKADKFNDVVAALKYALSSSPGQELPVELTIDFLSRLSLMD-GIENKIPRDGKASLCSLPLFQHHDGKLVEAS--GNVCILPKLVPKSALSVIESKFTITVLENIPTLEKLYTGLGFETKGDEQFYMKYVIPSLTKFT-DAQIQEYLY------PYRDVVKVRTHVLDRLKGIPFVSTNESSCTRKDCSKLFHPDNELFKLMEPAGNF-PN------KGMYSMSNFGDFERDRWLDFFLSLGMCQCIESGDHFLKYARMLXXXXXXXXXXXXS-QMLCKILLENLLSKDENVKKWSLDSNFLCKLKDIRFIAPHTGNKKFENMFPSK---NSSTKRIAFNGSVTSNSF------ELLWTSKHVLPTYAVNYGNKSMSLDVMSELGISNKDTVQMEFVKQNLTTILTSQDYLEATGSSSC--FSVKAEHRDFYNKALTEVYEFCLKHPENIE-SLIDVSFILVNQSKMLEQPRRCI--QQVIGTINPFLNEVHIAHGKYFSVFQSLGCSENAKFSHYVDVLSQIKQVEENQGKGFLDEKLVFRATRAVTYMSRVLFDDVSTKWKQDL--------YLPTFKFSDLKIRMVISNECLILDDASLEERLKLFDQPILRSSSLEGISVEKD--VNDKLLKYLPSSTKPKTFRASVEEVLCE----TCIPAQIDKKHGARIWKQRMKNPAFINGFKRLLSHEE----IKEEQNYEKILKSVQ----IAVMENLQTELRFEGVK-IEGSKIAKNVFTHLTDEQLVIYFDKEYSSEQV-----VSASISNAISELFGDILKTRQTITCFTKLLEMKPDQIPGFLDSQKIVNLG---DHSTFRRAGKPPPLGKPIPQEHHGILNFDVSFIIEVGDYVAYDENDEGEDYVYAKIVSMNKDGSVKIQLVNXXXXXXXXXXXXXXNDEGEDYVYAKIVS-MNKDGSVKIQLVNXXXXXXXXXXXSRDVPRSTLYKFENKYTKGTEAEVENTQEDSSQSQEIA--------QFGDDGENG-----NARKRQRT----EKPKTREETRSFEEIRDDIKKIIHDLKSKDEDEQKRVLRRLYLQWHPDKHP-NKDLATEVFKFLMNEKKRLDSD--FSEHFERWNEQASHNRSSR-QSYERDFDDFFRHFGQQXXXXXXXXXXXXXXXXXDYTGNGFHYD-NVPPRFTRENPQPAEARRWFKQAQHDFNQASE--MRACPEWICYVSHQVAEKALKAAIFS------KDYQGALYNEHNLCNLIREFQHADQELRNDLQELQTLVVDEDEPRYPRWS--MKIPHEKFNQQKADRALVLAQRIV 12431
AV LP K ++ G + S +Q ++F N+++ + E+R+ ++ ++L++ + + ++ CIP G L ++LI V+ L+D+ D RFP D +IK +Q GM + W +L+RA +V + A R S LL +I +KL+ +D A D A + + +FLP + KP + W G++ K + + ++Y + + I +E + +V + + P + + QL E Y++ + Y EA ++ E L FI+ +N + S F ++ L+ + YK+ +ELF VGV+ T D+A L+ + +E ++T+ F + + I+ L+ E+K F + Y LPD +L LCYND W+ D V Y +++I + A++L +R + R + + TT FGQ + LT+RIK ++ Y ++LKE +QNADDA++ EI F+ D R H +++ +KW LQGP L + N+ FT +D++GIQ LG G+ + +P KTG+YG+GFN+VY +TDCP ++ D +C+FDPH +YA GAT PG F D F + DV +L + T+ R P R + AK SEIS+ S + ++ + E L+FLN+++ I I I G + L+SV K+ D ++ K F S+IDS + +K R LKD VQ T+ W + + GFSS + + SV ++Q L P+GG+A C+ +Y K FC LP++LETG+ +NG+F LDS RR L+ NG +WN S++ + P ++ L + K++ G DP S P + + ++ FLS FP KA Y I + RLLPV R ++ W R F L K++ N+ NV ++ +L +++ + ++ + E+ N + D ++ TP +R L + + K +++LK ++ L+ +C K D + I++ GLPL + D L++F++K P FLT Y L K FM+ + + S + K FD+ F D+L + + S KD +E +W+KN W I K+ +E K + + +D +KD LL K T + LLP+ + P+ ++K++ + KA G ++ C K + CH + ++ AL Y + +S + + + DF + L + + + + +D L SLP ++ G+ V G +L K +P + + + LE L++LY +G D + Y+K+++P + + DA+++ +Y ++ +++ + ++L+ + + ++++ K + +F++M P F PN + + N F W++F ++G+ + I S L++A+ + N E K + Q ILL ++ + ++ L NFL +L I F+ P +F P N + I FNG+ + F +LLWTS +LP A K S+LG + + + NL L D + + C ++ E K L +YEF L V+F++V L +P + + P+L ++ + G + +F+ LG + YV+VLS+I + ++GK LD + R V+ + R L +D S K + DL YLP+ + ++ + L+ DDA + + + L + KD + KL+ P +P+ + +EE L E C + G + + + FI G R++ HE + E+ ++ K+++ ++ E LQT LR +G I S+ F +++ + + S+ + ++ ++ +A L D + C + I + +K+ +LG D S + P P G PIP E H L D + G+YV Y + EG D +Y GS + Y YA IV + ++ + + + + V LYKF E+SSQS++ A +F G + R+ +T + PK + + S EI ++ ++ E E+K+++RRLYL+WHPDK+P N D+A EVFK L NE RL+ ++ +R + + +SR QS + F F+ + Q+ + R + G + VPP F + P EARRW +QA+ +F+ A + EW+C+ + + AL AA ++ KD + L I E+ + L ND+ L+ VD + RYP +IP+++F + A R + I+
Sbjct: 2026 AVELPSSVKLGFEEAGCKQILLENTFSEKQFFSEVFFPNIQE--IEAELRDPLMIFVLNEKVDEFSGVLRVTPCIPCSLEGHPLVLPSRLIHPEGRVAKLFDIKDGRFPYGSTQDYLNPIILIKLVQL-GMAKDDILWDDMLERAVSVAEINKSDHVAACLRSSILLSLIDEKLKIRDPRA--KDFAA--KYQTIRFLPFLTKPAGFSLD-WKGNSFKPETMFAATDLYTAEHQDIVCLLQPILNENSHSFRGCGSVSLAVKEFLGLLKKPTVDLVINQLKEVAKSVDDGITLYQENITNACYKYLHEALMQNEITKMSIIDKLKPFSFILVENAYVDSEKVSF-HLNFEAAPYLYQLPNKYKN-----NFRELFETVGVRQSCTVEDFALVLESIDQERGTKQITEENFQLCRRIISEGIWSLIR-----EKKQEFCEKNYGKILLPDTNLMLLPAKSLCYNDCPWIKVKDTTVKYCHADIPREVAVKLGAVPKRHKALER--------YASNVCFTTLGTEFGQKEKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQHPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPYKTGQYGIGFNSVYHITDCPSFISG----NDILCIFDPHARYAPGATSISPGRMFRDLDADFRTQFSDVLDLYLGTHFKLDNCTMFRFPLRNAEMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLNHMEKISICEIDKSTGALNVLYSVKGKI-------TDGDRLKRKQFHA------SVIDS---VTKK---RQLKDIPVQQITYTMDTEDSEGNLTTWLICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAA------CI---------THNYKKPHRAFCFLPLSLETGLPFHVNGHFALDS-ARRNLWRDDNGVGVRSDWNNSLMTALIAPAYVELLIQLKKRYFPGS----------DPTLSVLQNTPIHVV------KDTLKKFLSFFPVNRLDLQPDLYCLVKALYNCIHEDMKRLLPVVRAPNIDGSDLHSAVIITWINMSTSNKTRPFFDNLLQDELQHLKNADYNITTRKTVAENVYRLKHLLLEIGFN-LVYNCDETANLYHCLIDADIPVSYVTPADIRSFLMTFSSPDTNCHIGKLPCRLQQTNLKLFHSLKLLVDYCFK-----------------------DAEENEIEVEGLPLLITLDSVLQTFDAKRPKFLTTYHELIPSRKDLFMN-TLYLKYSNILLNCKVAKVFDISSFADLLSSVLPREYKTKSCTKWKDNFASE--SWLKNAWHFISESVSV-----------------------KEDQEETKPTF-DIVVDTLKDWALLPGTKFTVSANQLVVPEGDVLLPLSLMHIAVFPNAQSDKVFHALMKA-GCIQLALNKICSKDSAFVPLLSCHT-----------ANIESPTSILKALHYMVQTSTFRAEKL-VENDFEALLMYFNCNLNHLMSQDDIKILKSLPCYKSISGRYVSIGKFGTCYVLTKSIPSAEVEKWTQSSSSAFLEEKIHLKELYEVIGCVPVDDLEVYLKHLLPKIENLSYDAKLEHLIYLKNRLSSAEELSEIKEQLFEKLESLLII--HDANSRLKQAKHFYDRTVRVFEVMLPEKLFIPNDFFKKLEQLIKPKNHVTF-MTSWVEFLRNIGL-KYILSQQQLLQFAKEISVRANTENWSKETLQNTVDILLHHIFQERMDL----LSGNFLKELSLIPFLCPERAPAEFIRFHPQYQEVNGTLPLIKFNGAQVNPKFKQCDVLQLLWTSCPILPEKATPLSIKEQE---GSDLGPQEQLEQVLNMLNVNLDPPL---DKVINNCRNICNITTLDEEMVKTRAKVLRSIYEFLSAEKREFRFQLRGVAFVMVEDGWKLLKPEEVVINLEYESDFKPYLYKLPLELGTFHQLFKHLGTEDIISTKQYVEVLSRI--FKNSEGKQ-LDPNEMRTVKRVVSGLFRSLQND-SVKVRSDLENVRDLALYLPS------QDGRLVKSSILVFDDAPHYKSRIQGNIGVQMLVDLSQCYLGKDHGFHTKLIMLFPQKLRPRLLSSILEEQLDEETPKVCQFGALCSLQGR--LQLLLSSEQFITGLIRIMKHENDNAFLANEEKAIRLCKALREGLKVSCFEKLQTTLRVKGFNPIPHSRSETFAFLKRFGNAVILLYIQHSDSKDINFLLALAMTLKSATDNLISDTSYLIAMLGC---------NDI--YRIGEKLDSLGVKYDSSEPSKLELPMP-GTPIPAEIHYTLLMDPMNVFYPGEYVGYLVDAEGGD-IY---------GSYQ-----------------------PTYTYAIIVQEVEREDADNSSFLGKIYQIDIGYSEYKIVSSLDLYKFSRP-------------EESSQSRDSAPSTPTSPTEFLTPGLRSIPPLFSGRESHKTSSKHQSPK-KLKVNSLPEILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQNADRASRRTFSTSASRFQSDKYSFQRFYTSWNQEATSHKSERQQQNKEKCPPSAGQTYSQRFFVPPTF-KSVGNPVEARRWLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIAADYAVRGKSDKDVKPT-----ALAQKIEEYSQQLEGLTNDVHTLEAYGVDSLKTRYPDLLPFPQIPNDRFTSEVAMRVMECTACII 4568 HSP 2 Score: 223.016 bits (567), Expect = 2.094e-57 Identity = 161/586 (27.47%), Postives = 277/586 (47.27%), Query Frame = 2
Query: 2186 NFNNFRWIPAASESPRGYPQCMSWKGANNTSQFTSHAPTQIYLQTHQYAIGSVHYVVHPEVSANFQSCFG--NTPHITKVLFQDVLANLKNLDYAFNIDEKATFQNMVMKIYQYL-------AVNFSAQLIQWIQIRKEFSIWHGSGFVPIGKIFLSKDKEQVSDVSPYFFQPP------NDVLSILGNVLSYMDCQKSAF--NIYVNTLXXXXXXXXXXXXXXXXXXXXXXXLALSLVKEIANRFSTEANENRADIFVPLDSESLKLAPLETCHYLDFSSDTRFSISSN------ILNRHLGTSVARQLNVPNLASKVLQGNQESI-FEPWGQKQEPLTKNLKRILDDYQDGLAIIKELVQNADDAGASEVSILYDRRTNDNLKTHLISPAMKDWQGPALWVHNDKMFTEEDFINITRLNAGTKKSEATKIGKFGLGFNAVYHLTDVPSIMSGKSLIFFDPHLKYLGDAVRSRE-PGIRISLDKNAD-LKIYGDQFAVYEKIFGAQVDLNSNSPSQEYKGSLFRFPLRNANCARTSEINPLHYSDQEMRTLLNKVKDSLQTLILFTQNVSSFSVYELNDQAKSPT 3865
+W+PA E P YP + WKG AP + H IGS +V + N + G P ++ VL + F+ ++ FQ+++++IY ++ +F A W+ W G F P+ + + + D+ PY P + + + G++ S IY+ + + ++ +L L++++ + + + I + L + P+ C Y D D + + +++ + A L VP L+++++ N E++ FE GQ+ EPLT +K IL++Y I KEL+QNADDA A+E S L D R N +++ +L+ P M GPALW N+ F++ DF+NITRL K+ E K+GKFGLGFN+VYH+TD+P IMS + +I FDP++ ++ ++ + PGI+I+ K L+ + +QF + +FG Q+ L +P Y G+LFR R A+ SE++ Y+ ++ +L+++ LI+FTQ+V S + L + +P+
Sbjct: 1150 TLKKIKWVPACKERPPNYPGSLVWKG----DLCNLCAPPDMCDVGHAILIGSSLPLVE-SIHVNLEKALGIFTKPSLSAVLKHFKIVVDWYSSKTFSDEDYYQFQHILLEIYGFMHDHLNEGKDSFRALKFPWV--------WTGKKFCPLAQAVIKPIHDL--DLQPYLHNVPKTMAKFHQLFKVCGSIEELTSDHISMVIQKIYLKS----------DQDLSEQESKQNLHLMLNIIRWLYSNQIPASPNTPVPIHHSKNPSKLIMKPIHECCYCDIKVDDLNDLLEDSVEPIILVHEDIPMKTAEWLKVPCLSTRLI--NPENMGFEQSGQR-EPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSREFMIMFDPNINHISKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAP-YSYNGTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVKSMYLKYLKIEETNPS 1706 HSP 3 Score: 204.527 bits (519), Expect = 8.478e-52 Identity = 232/901 (25.75%), Postives = 397/901 (44.06%), Query Frame = 2
Query: 1931 ISSNILNRHLGTSXIFLGEKGRFP---STEYSNRILL----KIGLKRAESVSYQEIQTSIQYIQSNNMERSNIITKVNAILAAIKNGGLQYHN---------FNNFRWIPAASESPRGYPQCMSWKGANNTSQFTSHAPTQIYLQTHQYAIGSVHYVVHPEVSANFQSCFGNTPHITKVL-------FQDVLANLKNLDYAFNIDEKATF--QNMVMKIYQYLAVNFSAQLIQWIQIRKEFSIWHGSGFVPIGKIFLSKDKEQVS-----DVSPYFFQPPN----DVLSILGNVLSYMDCQKSAFNIYVNTLXXXXXXXXXXXXXXXXXXXXXXXLALSLVKEIANRFSTEANENRADIFVPLDSESLKLAPLETCHYLDFS----SDTRFSISSNILNRH----LGTSVARQLNVPNLASKVLQGNQESIFEPWGQKQEPLTKNLKRILDDYQDGLAIIKELVQNADDAGASEVSILYDRRTNDNLKTHLISPAMKD-W---QGPALWVHNDKMFTEEDFINITRLNAGTKKSEATKIGKFGLGFNAVYHLTDVPSIMSGKS-LIFFDPHLKYLGDAVRSREPGIRISLDKNADLKI-YGDQFAVYEKIFGAQVDLNSNSPSQEYKGSLFRFPLRNANCARTSEINPLHYSDQEMRTLLNKVKDSLQTLILFTQNVSSFSVYELNDQAKSPTEMKLLFSTSKSKDHGIRDMVQYANKELERRDYQWYGFNQNQVTTPIKL-----------MVKKDTKETTHQWVVQSRNGGADTYTFAMS----HPNEG--YLPYCSVAVCLGNKNDVIQQKGHLFCFLPLPIKNGLPSHVNAAFELSSNRLSLKAHNEDEKIYHTAQNWND-LIAKDAGNAYYSLLLHLVNKVGISGQDFYNLFPGKD 4435
+ S +++ + +F + GRFP + +Y N I+L ++G+ + + + ++ ++ + N + + ++IL ++ + L+ + + R++P ++ P G+ + WKG N+ T A T +Y HQ + + +++ E S +F+ C + + + L V+ LK + A ++D+ T +N+ Y+YL I + I + + F+ + ++ D E+VS + +PY +Q PN + + V C F + + ++ T + + SL++E F +N I +P +L L P ++ Y D DT + R LG R + AS V + F GQK E LT +K IL+ Y ++KEL+QNADDA A+E+ ++D R H + D W QGPAL V+N++ FTE+D I L GTK+ K G++G+GFN+VYH+TD PS +SG L FDPH +Y A S PG R+ D +AD + + D +Y G L++ ++FRFPLRNA A+ SEI+ + SD+ ++ LL+K++ L++F ++ S+ E++ KS + +L+S G R L+R+ Q++ + VT +L M +D++ W++ +R+G + + S H N+ P VA C+ + ++ FCFLPL ++ GLP HVN F L S R +L D+ +WN+ L+ AY LL+ L + FPG D
Sbjct: 2109 LPSRLIHPEGRVAKLFDIKDGRFPYGSTQDYLNPIILIKLVQLGMAKDDILWDDMLERAVSVAEINKSDHVAACLR-SSILLSLIDEKLKIRDPRAKDFAAKYQTIRFLPFLTK-PAGF--SLDWKG-NSFKPETMFAATDLYTAEHQDIVCLLQPILN-ENSHSFRGCGSVSLAVKEFLGLLKKPTVDLVINQLKEV--AKSVDDGITLYQENITNACYKYLHEALMQNEITKMSIIDKLKPF---SFILVENAYV--DSEKVSFHLNFEAAPYLYQLPNKYKNNFRELFETVGVRQSCTVEDFALVLESIDQERGTKQITEENFQLCRRIISEGIWSLIREKKQEF---CEKNYGKILLP--DTNLMLLPAKSLCYNDCPWIKVKDTTVKYCHADIPREVAVKLGAVPKRHKALERYASNVCFTTLGTEF---GQK-EKLTSRIKSILNAYPSEKEMLKELLQNADDAKATEICFVFDPRQ------HPVDRIFDDKWAPLQGPALCVYNNQPFTEDDVRGIQNLGKGTKEGNPYKTGQYGIGFNSVYHITDCPSFISGNDILCIFDPHARYAPGAT-SISPG-RMFRDLDADFRTQFSDVLDLY---LGTHFKLDN--------CTMFRFPLRNAEMAKVSEISSVPASDRMVQNLLDKLRSDGAELLMFLNHMEKISICEID---KSTGALNVLYSVKGKITDGDR---------LKRK--QFHASVIDSVTKKRQLKDIPVQQITYTMDTEDSEGNLTTWLICNRSGFSSMEKVSKSVISAHKNQDITLFPRGGVAACITHN---YKKPHRAFCFLPLSLETGLPFHVNGHFALDSARRNLW---RDDNGVGVRSDWNNSLMTALIAPAYVELLIQLKKRY----------FPGSD 2938 HSP 4 Score: 200.675 bits (509), Expect = 1.312e-50 Identity = 156/504 (30.95%), Postives = 251/504 (49.80%), Query Frame = 2
Query: 3056 NLASKVLQGNQESIFEPWGQKQEPLTKNLKRILDDYQDGLAIIKELVQNADDAGASEVSILYDRRTNDNLKTHLISPAMKDWQGPALWVHNDKMFTEEDFINITRLNAGTKKSEATKIGKFGLGFNAVYHLTDVPSIMSGKSLIFFDPHLKYLGDAVRSREPGIRISL-DKNADLKIYGDQFAVYEKIFGAQVD--LNSNSPSQEYKGSLFRFPLRNANCARTSEINPLHYSDQEMRTLLNKVKDSLQTLILFTQNVSSFSVYELNDQAKSPTEMKLLFSTSKSKDHGIRDMVQYANKELERRDYQWYGFNQNQVTTPIKLMVKKDTKETTHQ--WVVQSRNGGADTYTFAMSHPNE-GYLPYCSVAVCLGNKNDVIQQ-----KGHLFCFLPLP----IKNGLPSHVNAAFELSSNRLSLKAHNEDEKIYHTAQNWND-LIAKDAGNAYYSLLLHLVNKVGIS-GQDF-------YNLFPGKDRLEI--QNFTKIILTTFLQN 4489
NL SK L+G +GQ PL LK IL Y +G I+KEL+QNA+DAGA+EV LYD T +T L S M +QGPAL+V+N+ +FT ED+ I + KK + K+G+FG+GFN+VYH+TDVP I SG + DPH G E G +L D + ++ DQFA + IFG+ + +N N P G+ FRFPLR + S+++ Y+ Q++ L + T++LF ++V S+Y ++ S SK+ H + ++ + + N VT + +++++++ + + W+V + GG + S +E ++P +A+ L +++D + G FCFLPLP GLP H++ F L+ NR S+K D+ A WN+ L+ AY +L+L + ++ + DF Y L+P ++++ Q + + + LQN
Sbjct: 77 NLQSKGLKGGGR-----FGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDE-TQYGTET-LWSKDMAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSGDQIGMLDPHQTLFG----PHESGQCWNLKDDSKEISELSDQFAPFVGIFGSTKETFINGNFP-----GTFFRFPLR----LQPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLYVREADGTEKLVFRVTSSESKALKHERPNSIKILGTAISNYCKKTPSNNITCVTYHVNIVLEEESTKDAQKTSWLVCNSVGGRGISSKLDSLADELKFVPIIGIAMPLSSRDDEAKGATSDFSGKAFCFLPLPPGEESSTGLPVHISGFFGLTDNRRSIKWRELDQ-WRDPAALWNEFLVMNVVPKAYATLILDSIKRLEMEKSSDFPLSVDVIYKLWPEASKVKVHWQPVLEPLFSELLQN 559 HSP 5 Score: 139.428 bits (350), Expect = 3.740e-32 Identity = 124/436 (28.44%), Postives = 199/436 (45.64%), Query Frame = 3
Query: 6174 FGQYDN-LTARIKRLIENYSDPFDILKETIQNADDAESNEIEFILDKRSHGTEKVISEKWEHLQGPGLLIVNDGKFTTEDLQGIQKLGVGSHKNDPLKTGKYGVGFNTVYSLTDCPILLTKVDGTEDRMCMFDPHRKYAEGATDKRPGCSFPDARTFLDPYDDVKSAFL-FNEEDKET-------KTILRLPFRMGDTAKDSEISTTSVSIKTIEKTMKGFLEHADEFLLFLNNIKTIKIRIVNGEGEKDELFSVHSKLYDTLP-STVDSFKVSAKGFADRFGDIYSMIDSEMQLHRKHCIRHLKDDKVQHATHWDVFEQVGFSSFDDLPDSVKDTLESQTHHLVPKGGIA-KLSSKDDCVECDREKCSKNTSYTKLKSLFCTLPINLE--TGISGIINGNFFLDSDNRRALYNGE-----DKNKEWNQSILNHCV 7427
FGQ L +K ++ Y + ILKE IQNA+DA + E++F+ D+ +GTE + S+ QGP L + N+ FT ED GIQ++ K+DPLK G++G+GFN+VY +TD P + + D++ M DPH+ G + + D + D + F+ KET T R P R+ + S++S+ + + + + + F AD LLFL +++ + + + +G + +F V S L +S K+ ++ S + + H + + K T W V VG DS+ D L+ VP GIA LSS+DD E + ++ F LP E TG+ I+G FF +DNRR++ E D WN+ ++ + V
Sbjct: 89 FGQTTPPLVDFLKDILRRYPEGGQILKELIQNAEDAGATEVKFLYDETQYGTETLWSKDMAPYQGPALYVYNNAVFTPEDWHGIQEIARSRKKDDPLKVGRFGIGFNSVYHITDVPCIFSG-----DQIGMLDPHQTLF-GPHESGQCWNLKDDSKEISELSDQFAPFVGIFGSTKETFINGNFPGTFFRFPLRL----QPSQLSSNLYNKQKVLELFESFRADADTVLLFLKSVQDVSLYVREADGTEKLVFRVTSSESKALKHERPNSIKILGTAISNYCKKTPSNNITCVTYHVNIVLEE-ESTKDAQKTSWLVCNSVGGRGISSKLDSLADELK-----FVPIIGIAMPLSSRDD------EAKGATSDFSGKAFCFLPLPPGEESSTGLPVHISG-FFGLTDNRRSIKWRELDQWRDPAALWNEFLVMNVV 501 HSP 6 Score: 124.02 bits (310), Expect = 2.051e-27 Identity = 130/517 (25.15%), Postives = 221/517 (42.75%), Query Frame = 3
Query: 6135 TPWIDDSQVTTESFGQYDNLTARIKRLIENYSDPFDILKETIQNADDAESNEIEFILDKRSHG--TEKVISEKWEHLQGPGLLIVNDGKFTTEDLQGIQKLGVGSHKNDPLKTGKYGVGFNTVYSLTDCPILLTKVDGTEDRMCMFDPHRKY-AEGATDK-RPGC------------SFPDA-RTFLDPYD-----DVKSAFLFNEEDKETKTILRLPFRMGDTAKDSEISTTSVSIKTIEKTMKGFLEHADEFLLFLNNIKT-----IKIRIVNGEGEKDELF----SVHSKLYDT----------------------LPS-----------TVDSFKVSAKGFADRFGDIYSMIDSE----MQLHRKHCIRHLKDD---KVQHATHWDVFEQVGFSSFDDLPDSVKDTLESQTHHL--VPKGGIA-KLSSKDDCVECDREKCSKNTSYTKLKSLFCTLPINLETGISGIINGNFFLDSDNRRALYNGEDKNKEWNQSILNHCVLPCFISHLEFVK 7463
T I+ + E GQ + LT RIK ++E Y DI KE +QNADDA + E F++D R + E ++ GP L N+ +F+ D I +LG + + K GK+G+GFN+VY +TD PI++++ + M MFDP+ + ++ DK PG FP+ + F+D + V++ + +N T+ RL FR AK SE+S+T + I + F ++F ++K+ +KI N +D + S SK +T LPS TV+ F + AD ++ D + ++ + + D+ K T W + + D +++K +L L VP G + +LS D K T + +FC LP+ ++TG+ ING F + S NR+ ++ + K + WN + + H ++ ++ L ++
Sbjct: 1441 TRLINPENMGFEQSGQREPLTVRIKNILEEYPSVSDIFKELLQNADDANATECSFLIDMRRNMDIRENLLDPGMAACHGPALWSFNNSQFSDSDFVNITRLGESLKRGEVDKVGKFGLGFNSVYHITDIPIIMSR-----EFMIMFDPNINHISKHIKDKSNPGIKINWSKQQKRLRKFPNQFKPFIDVFGCQLPLTVEAPYSYN------GTLFRLSFRTQQEAKVSEVSSTCYNTADIYSLVDEFSLCGHRLIIFTQSVKSMYLKYLKIEETNPSLAQDTVIIKKKSCSSKALNTPVLSVLKEAAKLMKTCSSSNKKLPSDEPKSSCILQITVEEFHHVFRRIADLQSPLFRGPDDDPAALFEMAKSGQSKKPSDELSQKTVECTTWLL------CTCMDTGEALKFSLSESGRRLGLVPCGAVGVQLSEIQD---------QKWTVKPHIGEVFCYLPLRIKTGLPVHINGCFAVTS-NRKEIWKTDTKGR-WNTTFMRHVIVKAYLQVLSVLR 1929 The following BLAST results are available for this feature:
BLAST of TCONS_00055963 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens)) Total hits: 1
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