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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055960 ID=TCONS_00055960|Name=TCONS_00055960|organism=Clytia hemisphaerica|type=transcript|length=234bp
tcagGAATCAAGATTTGGAGCACAAGATTCACCAAGTTGAGCAAGCCAAC
GAAAAGATGAAGCAAAATATCGAGAAAGAACTGATGAAGCTCAGCGAACA
AAATCAACAATTAAGCGAAGGTAAAGTCAAACGCCAAATGTCCATCATGA
GAAGAGAACAAAAGATCGTCAATCTCGAATCCAAATTAAACGAATATGCT
TCAGAAAGAAAAGCACACGAAGATAAAATGAANT Run BLAST on NCBI transcript from alignment at scaffold_266:630693..631626+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055960 ID=TCONS_00055960|Name=TCONS_00055960|organism=Clytia hemisphaerica|type=transcript|length=934bp|location=Sequence derived from alignment at scaffold_266:630693..631626+ (Clytia hemisphaerica)
tcagGAATCAAGATTTGGAGCACAAGATTCACCAAGTTGAGCAAGCCAAC
GAAAAGATGAAGCAAAATATCGAGAAAGAACTGATGAAGCTCAGCGAACA
GTAAGATCTAGTTATTCAGCCCACCATCAAAAAACTTATCCTTATTATCA
ACAAATACAAATACAAATACAATGATAATTTGAGATCATTTCATTCTACA
CGTTGACTAGACATTGCAAGTAATATGTCTAAAAATTCAGCCGAAATCTT
GATATTATAGTGATGGTGTAGTTGATTACCTCCCTATCAGTCCTNcttta
ggcgtagaaactttcgcgagcagaaactttcgcgattttcgcgaattttg
gtccttttcgcgaaagtaaatgtctttaaaaattctaggaagggccattc
gcgaaagtttatgctcgcgaaaaattttcgacaaaatagaaaatctgtta
aacttcaaactttgaataaaatgtaagttttatggcactttttagcctgc
taaaagactaataagtcaaaggacaaatgtttcaagccaaNTTgcttttt
aactttattttgcTAATTCTTTCTTGTTTCTTTCAAGAAATCAACAATTA
AGCGAAGGTAAAGTCAAACGCCAAATGTCCATCATGAGAAGAGAACAAAA
GATCGTCAATCTCGAATCCAAGTAAGTTCTGGAGTAACTGGTGATGTGAC
CAGTCACAATATAGAAATTTGAACTTCTCAGCTACTCAAAAGAATCTATC
CCTTTAACCAACTAATTCTCTCACATTTCTACTATATTTCAAAGGTATTG
AACTTCGCAGATATTGATAGGAGTTCGAGCTTATGTATCTGCTCGTGGAT
ATGTTTTACGCAAATTTTATTCTACTTCCAATAGATTAAACGAATATGCT
TCAGAAAGAAAAGCACACGAAGATAAAATGAANT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055960-exon-scaffold_266-1491911889:630693..630792 | TCONS_00055960-exon-scaffold_266-1491911889:630693..630792 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1510915933:630693..630792 | TCONS_00055960-exon-scaffold_266-1510915933:630693..630792 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1575043694:630693..630792 | TCONS_00055960-exon-scaffold_266-1575043694:630693..630792 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1491911889:631280..631363 | TCONS_00055960-exon-scaffold_266-1491911889:631280..631363 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1510915933:631280..631363 | TCONS_00055960-exon-scaffold_266-1510915933:631280..631363 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1575043694:631280..631363 | TCONS_00055960-exon-scaffold_266-1575043694:631280..631363 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1491911889:631577..631626 | TCONS_00055960-exon-scaffold_266-1491911889:631577..631626 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1510915933:631577..631626 | TCONS_00055960-exon-scaffold_266-1510915933:631577..631626 | Clytia hemisphaerica | exon |
| TCONS_00055960-exon-scaffold_266-1575043694:631577..631626 | TCONS_00055960-exon-scaffold_266-1575043694:631577..631626 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:630693..631626 + |
Blast
The following BLAST results are available for this feature:
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