TCONS_00055933 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055933
Unique NameTCONS_00055933
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1733

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055933 ID=TCONS_00055933|Name=TCONS_00055933|organism=Clytia hemisphaerica|type=transcript|length=1733bp
AAATGCACGAGGAAAAAAATATCCCATGAGACGAAACCAACCTTCAAGGC
ATCTGaTTTAGAGTTTTTCAAAGATGGCTAGCAAAACAATTGAAACCAGT
GAAGCGGCAAGTTGcgataaagaaaatttaaatattttatcacGACCCAC
TAGAACAAGGAAGCCAGTACTCACAGAAATTCTAAGCTCAAGTGACATCG
AACTTAGTCCTCCCTTAAACTATGATGCATTAGAGGAGAATGATGAATAT
GATCCCAAAAAAAATGAATCTGACGATGATTCCGATTTGCCTTCTACACC
TCTCACAAAGAAAATAACTAAACCAACGAGGGGACGTGGTAGAGGTCGTG
GTACAGCATCAACTCGTGGACGTGGGACATCATTGACTTCTGGGCGGGGA
GCAGCAAAAGGAAGTGGAACACCAAAAGTAGGACGTGGTAGTCGCAAAAG
TNGACTTCTGGGCGGGGAACAGCAAAAGGAAGTGGAACACCAAAAGTAGG
ACGTGGTAGTCGCAAAAGTGGAGAATTTTCTACAAAAGCATCTCAAAAAT
tattctacaaaaagttgagtGGGCTAGACAACAAAACCTTTGTTAGTTTG
ATCAAAGATCTCATAGAAAGTGAGCAAGTCTCAATGACTACAGTTAACAA
TAAAATAAACTCCAACATTGATATTGATTCAATTATGAAGGGCTTAGAGA
AAGCCAAGAAGGCTATTTTCAAAGCCATGCCAAACCCATGGAGATTTGGA
GGAGGAAGTGCTACTTTTCAAAGAAATGATTTTGCACGTAAGCGATGTAC
CTCTTCCCAAAGTGCATTCAAAACTTTATTCAGAAATAACACAACCAATT
TCAAAGGGTTGGATAATGGTGACCTCATTATTGATTTTGTCTTGAAAGCT
TTCCCTGTTGTTTCTGAGCTCCCACAATGGATTGGTTGTTTTAAACCTTT
AAGCTTTCTGAATGATTGTCTGGATATGTTAGGTGGTCTACTTATGCAAG
CTATTCCAAAGCTCTCAAATGAAAGACTGCAAGATATTGTTGATGAAGTT
ACAcgtttctcatcttttacaggTGAAATGGGTGTCTCtgttgaaaatga
aaagatgGGAGAGGCTTTAGCTTTACTTAAGTCGAAAATTTGATGCAAAA
GACTTACGAAAATGTGTGTATGTATATTATGTACAATTTGTGTTTCATTT
CAAAACAGATATATTTGATTCATTATTAggcttttaaacatttttattat
atttttaaatgTAGTAATCATATGTGATATATATTCCATTCTATATTTAc
tcattttcatcttttacAGGTGAAATGTCATTTAAATTGGCATTATTAGA
TTCTAAGATTTGATCGTAaatttaagtttaaaaaaacatgtatattttTT
GTGTATAATATTTCAAGAtatatttttaggttttcaaacttttcaaagat
ttttaaatgtaaatagtTCACAAGGTGCCTAATTTTATCATTATGTGAGT
TAGGTATTTTAGGTCCTCATATATTTATGATAGGAGTATTTTAGTTTTAT
TTCAACGTCActattgtttttttcaaaaaagatttataaattagGATTTT
TGTTTTCTCTCGCAAAGAAACTCAATTTAGCACTGTAAATGCACATTTAT
CAGTAGGACATGTCGTTgccaaaagtcaattttttcgaaaattgagtcAT
ATAAagtcatatttagaattttataaattcttg
Run BLAST on NCBI

protein sequence of TCONS_00055933-protein

>TCONS_00055933-protein ID=TCONS_00055933-protein|Name=TCONS_00055933-protein|organism=Clytia hemisphaerica|type=polypeptide|length=169bp
MTTVNNKINSNIDIDSIMKGLEKAKKAIFKAMPNPWRFGGGSATFQRNDF
ARKRCTSSQSAFKTLFRNNTTNFKGLDNGDLIIDFVLKAFPVVSELPQWI
GCFKPLSFLNDCLDMLGGLLMQAIPKLSNERLQDIVDEVTRFSSFTGEMG
VSVENEKMGEALALLKSKI
Run BLAST on NCBI

transcript from alignment at scaffold_266:311507..322353+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055933 ID=TCONS_00055933|Name=TCONS_00055933|organism=Clytia hemisphaerica|type=transcript|length=10847bp|location=Sequence derived from alignment at scaffold_266:311507..322353+ (Clytia hemisphaerica)
AAATGCACGAGGAAAAAAATATCCCATGAGACGAAACCAACCTTCAAGGC ATCTGGTAGGTCATGATTTTAAAACAGTTTGCTTCTGTTAAACTCTATTT TATCagcgattaatttttttaaaggctcTTTTTTAACCTTTCTATTTATT CTTGAAATAACATCCTTACTTATCATATTTCTCTTATTATACCTACCGCT GCCCCTGCCCTGGCTGGGTGGCCGCACAAGTTTCGAAAAGTTTCCAGAGA AAGTGTTTATTCAAGATGTGATGATACTCACACTCACCATACTCACGGTA TATTATACCTAGGCCAAACCAGAGGCTGGGGAGCTCAAATTTATTGATTC TGATGAGTAGTGCCaatattcaaataaataaactaGTATATCAGCTAGCA AAAGGCAAGTATatcagactcaaaatttcagaaaaaaaaagttacacctc aacatacaaagtttagAGCCTGGTGCAACTAAAACAGTGAACAGTATGGT ACAGTTTgtgaatgacacagtctgtgtctgcgagtgaacccttgttgacg cTGGTTGACAcgttaacctgagatcagattgtggttgttttctgccccac gctgaagctctaaagggatgggtgaaaacatacaatctgacgaatatgca atctcgaaatcgtaaggactgcgttcgtctaaaaggactaggaatgacaa caaagttgcgtgattgtgtttatgaatagggcgctgtatcagtttttgac gttctggcgcacaacaagattctttttttgcaatgtcagcttttccataa attatgcgcatGCATCGAAAACTATAGAAAATTCTGCTACTGGGTGCGTA cggaccaattagagacactcaaATATGCAACGCAAGGACAATCCCTGCAG AGGAGTTAGTTGGTCCAGATTGTAAACCAGAAACATGATcttaaaaaaac tagacggtgaaatagtttactgtctggatatccaggcaaGCAataggcgg caaatctctggctgattttttaaaagtatggggccatccacatagtacgt acgcactaaaatgttgaaaattgagtAGCCCCTCCCCCTGTAGGCAAGTG TACGCAAATGACTAATTTCGAATTCTAATCGTTTGGTTcagacctttatt tcatacatgaaattcaatgtttattaagaaactttttccttTCCTTAATA AGAAGCATAAAAGTTGacataaaagcaagcaaaaaagggctatgaaaatt tttttctctgcgtacatacattttcctttgacccctcccctccccctgta cgcaagcatatgcttttgagaagatccccCTCCCCCCTTAGNttttcctt tgacccctcccctccccctgtacgcaagcatatgcttttgagaagatccc cctccccccttagcagtcaggacctctttggtcttttttaacattagttc ggatagaataaaaacatacctgatcaacaaaaccaaaccttctgtcttgc gtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTGTTCCAAACCCAAATCCCACCCCCGAAAACAGGCATTTCCC ACCCCGAAAATGCCCTGTTCCCAGGCCtgggtttttaacattttttcctt ttaaaagggctatgaaaatttttttctctgcgtacatacattttcctttg acccctcccctccccctgtacgcaagcatatgcttttgagaagattcccc tccccccttagtgcgtacatactatgtggacggccctaTGCACGCATGCG CAGTTAGTTTAAACATGATTAGCACAGTGAGCGTTATCGTAATTATATTG CAgatattgaattgaattgaatatattttcattgcaacgcagcaggataa ccccttacaaaaaaaattagattactctaatacaatggggaacctagaag aaactgaaaaattgttacagacctaaagaaaaataaaccagctgcgctgg aaggtcagcctaaattgcttaatatgattagaaagatatgttgttaaaaa ttgatatgatttacTAAGACGAGAGTAANNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNGATATGATTTACTAAGACGAgagtaaaaaaatca tcaaatttacgtTTGTACACAATATGGATTAACGAAAATATGCCATGTTA CAATCTGTATGACAGAATGATTATTTGTCTCTTAATTAGGATAGATATTT AGATATACagatgaacagcaacaaaagactacatcaacaacagattcaag aaaataaaaatccttgcAAGGAAGTTGGAAGTTAAATGCAAGTacttatc aaaaatcacaaaaaatttatacacttattattttttactaagCTTAGACT TACAATTATATTTAAGCTCAAgctggacaaaaaatcaaaaaagtttcaaa aacaaagatgctgtaaatcagtaaaagttaaaatGGTGTCATTCTTATTC ATCTTAACTGCAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCAAGTtcgagaaaacattatttttgtg aataatcagataattaagctgtgaactgtaatatatatacactccatcaa attccagcaattgttggtggttattagtcagccccggtgactcttcaaat cgtttcgacgatttttttcccgctggtcgtcgtcgtcgtcgttaagactt tcatttttaattccgatttcggattattttcgggaaacaggatttcggga ttatttagcgcgcgaaaataattttttcttagcaaGATGAAataagaaaa gataaaaaacacataacataaaaagaagccttataattaataataagaaa aaaagaagagaaaaaaaattattttttgcgtcATATCCAATAGTTAATAA AAGATGctttgcattgtaaataaagagAGCTAATTATAGAGAAAGCATAG ATGGAGAAAGTGAGtatatatcaaagaaatttttttccttcgaATAATGT TGAAAGTTATATACTACTTGTAGACTATTTCTTCTATCTGGGTCttttat tacacgttttttttataaggaataacacgttataaggaactcgaggctga aaatggtccaaaaaataaggaattgttaaggaactgctcaggctgagaat aagaaaacaagttttaaggaacagtaacagatggttatccaaacttagca gctaggtaaataaggaactcaataaggaactttgaggctgaaattctctg taaaaataaggaactcaaggctcagagcaaagttaaggttccttataaaa aaacaaacgtgtattCTCATGGAAAGAGTATAACAACAACGGAATAAATC TTTTTCACCGACTTCTGCTTTGGATACGGATTCCACTATGCACTGCTCTG TTTTCTTCTGAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTTTAACAAAGCCAGAT TTCTTATCTGTACTTCCTATTAATCATTCTAAGCCTTCTAAGCATtttgg gctgactttccagcgcagctggtttattctatattcaagtccaaaatgaa aaactatgttttcatgctacaaaaTAATGAGGTCTAGCATAGGTAAAAGA ATGACtcacaattcaggaaaaaacttgagcaaataagttaaaatcttcat actttaaagaaaaaaacatcctAATAATCTAACTCCAGTGTTGTATCTTN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACACA GATCGGGAGACCAAACTTAACCCGATcggataaaaactttagaaatcgga ataaaaaaaccaaactcTTAAGCGCCGGCTGGAAaaaagggatttgaagg gtcatcggggctgaccaaaaaatgaataaacgattatcataatattaata gtaacaacaataataatgaatataagaaatatttttacttttattttatg acaatttctttgagtagttttatttgaaaagttcttcctgttacaccACC CACCCCATCCCACCCCGGGAAAACACACTAGCTTCGCGCACTCACATTCA CACagaaacacacacacacaaagattattcctcttcagctttgtatttgt ctaatagaattttgtagctaaagattttagcTCGTTAGTATCaaggttgt gaaaatcagtgtcaggatgatttattagtaactcattccattgttttgac aAAAGACAAGACAAGAGAAAGAGTttaagtccaaaatttgtggttttgac cgttgaaagttttagtagtttaatagctttgcccctggtgccagttttgt gatcaatttcatcaaaattaagtgtCGATAGGACATCAGACGGAAAATTG CCTTGgaggtatttttgaataaataagatcaaagattttgagtaGTTTAA GCTCAGCAAACAGGGGAGTGGCAGAAGTTCTTAGTGCAGTGTTTTGAAGA GTAAGAATTCTATCTGTGACAGTATTGTCACACAGTCCCCAGAGTTTACT AGCATAGTGAACacaagaggcaaaaattgcatgataaatgtttagaagga TGTGAATTGGAACATATTGACGAAGTTTGGATATTGCCCCATCTGCCCTT CTCAATTTAGCAGCAAGCAGAAAGAAGTATGAACCTTCCAGTTTAGATGA TTGTCAAGGTGAACACCCAAATACTTCACATTCTTACTTGGTGATAGGAT TTTCCCGCAAAGCTTAATTCTTGGAATACATTCCATCTGTCTCTAAGGGG aacgaaaaataacaaactcagTTTTGCTAGCATTCAAGGAAATTTTGTTG ACATTAAGCCAACTGACTAAGGCTCTGAGATCAGAGATATCTTGCTCCAG AGCACCGGAAGTGCTCCGGAATCTTCCAGTGTTCTAGAGCACAAAAATGG CACTTTTTGCTCCGGACGTCTCCAGAGCACCGGAAGGGTCCTACAGGGGT TCGCTTATTaccagttagggttagggttggagcttgagagtcacaatata aggccaaaggccttcttaggggcatttgTACCCTGAGACTTAACttgcta taagtatttgtgaatgacagctgTTTGTCATGTCTCCTTGGCGCAAGTGG TcaggcattgggtttgtaaaccaaggttgcttgcatttggtggtgtGAGC TGGGGTCGGAGACCTATTTCACCGATACGGGcgaatttcagaaaaatact tcaAGAGTCAGAAAATCGGGATaaaagataggaaagtagaaaataggggg gaAATAggagaggatgcatcctggtggatgatatcttTTGCCaacctcta taaggagcacaaATCCATTAGCGAATGCCAGCAGTCTATATGATGGCATC ATTAGGGGTGCTCCTagtgaaaaatgttttgattgtgATTATAAACTTAC TCTTCATCCCTTTTTAATAAGATGGTAAATCTAAAAAATAGGAATAAGAA TCCATTTTTTCCAGACCTACTCCCCTTTTCCAAACCTACTTCTTTTGCCC TTTAATAAAATTGAgattaaaactaaaatattAGATTTTAGCCCACTCTT GTTTTGGCACTTCAACTCATCTCTAACTTATGCCTAAAAGTTTTCAGGGA CAGACCAACTCAACTAACATTTAAATTTTGGGTGGTTTTAGATGGTGCTT AGACTTTGTTATTTTGTAGGACCTGGAAACCTTTGTTGCCTGTGCAATGT TTGATTAATAAAAGTTTTATTCTTTCAATTGTGACCACTGGCCCGTTACT TTTCTTTAACCATTGATAAGTTTTGAAGCTAGTTTATCTgtgatcaaatt taatttttttctcatttagaTTTAGAGTTTTTCAAAGATGGCTAGCAAAA CAATTGAAACCAGTGAAGCGGCAAGTTGcgataaagaaaatttaaatatt ttatcacGACCCACTAGAACAAGGAAGCCAGTACTCACAGAAATTCTAAG CTCAAGTGACATCGAACTTAGTCCTCCCTTAAACTATGATGCATTAGAGG AGAATGATGAATATGATCCCAAAAAAAATGAATCTGACGATGATTCCGAT TTGCCTTCTACACCTCTCACAAAGAAAATAACTAAACCAACGAGGGGACG TGGTAGAGGTCGTGGTACAGCATCAACTCGTGGACGTGGGACATCATTGA CTTCTGGGCGGGGAGCAGCAAAAGGAAGTGGAACACCAAAAGTAGGACGT GGTAGTCGCAAAAGTNGACTTCTGGGCGGGGAACAGCAAAAGGAAGTGGA ACACCAAAAGTAGGACGTGGTAGTCGCAAAAGTGGAGAATTTTCTACAAA AGCATCTCAAAAATtattctacaaaaagttgagtGGGCTAGACAACAAAA CCTTTGTTAGTTTGATCAAAGATCTCATAGAAAGTGAGCAAGTCTCAATG ACTACAGTTAACAATAAAATAAACTCCAACATTGATATTGATTCAATTAT GAAGGGCTTAGAGAAAGCCAAGAAGGCTATTTTCAAAGCCATGCCAAACC CATGGAGATTTGGAGGAGGAAGTGCTACTTTTCAAAGAAATGATTTTGCA CGTAAGCGATGTACCTCTTCCCAAAGTGCATTCAAAACTTTATTCAGAAA TAACACAACCAATTTCAAAGGGTTGGATAATGGTGACCTCATTATTGATT TTGTCTTGAAAGCTTTCCCTGTTGTTTCTGAGCTCCCACAATGGATTGGT TGTTTTAAACCTTTAAGCTTTCTGAATGATTGTCTGGATATGTTAGGTGG TCTACTTATGCAAGCTATTCCAAAGCTCTCAAATGAAAGACTGCAAGATA TTGTTGATGAAGTTACAcgtttctcatcttttacaggTGAAATGGGTGTC TCtgttgaaaatgaaaagatgGGAGAGGCTTTAGCTTTACTTAAGTCGAA AATTTGATGCAAAAGACTTACGAAAATGTGTGTATGTATATTATGTACAA TTTGTGTTTCATTTCAAAACAGATATATTTGATTCATTATTAggctttta aacatttttattatatttttaaatgTAGTAATCATATGTGATATATATTC CATTCTATATTTActcattttcatcttttacAGGTGAAATGTCATTTAAA TTGGCATTATTAGATTCTAAGATTTGATCGTAaatttaagtttaaaaaaa catgtatattttTTGTGTATAATATTTCAAGAtatatttttaggttttca aacttttcaaagatttttaaatgtaaatagtTCACAAGGTGCCTAATTTT ATCATTATGTGAGTTAGGTATTTTAGGTCCTCATATATTTATGATAGGAG TATTTTAGTTTTATTTCAACGTCActattgtttttttcaaaaaagattta taaattagGATTTTTGTTTTCTCTCGCAAAGAAACTCAATTTAGCACTGT AAATGCACATTTATCAGTAGGACATGTCGTTgccaaaagtcaattttttc gaaaattgagtcATATAAagtcatatttagaattttataaattcttg

Coding sequence (CDS) from alignment at scaffold_266:311507..322353+

>TCONS_00055933 ID=TCONS_00055933|Name=TCONS_00055933|organism=Clytia hemisphaerica|type=CDS|length=510bp|location=Sequence derived from alignment at scaffold_266:311507..322353+ (Clytia hemisphaerica)
ATGACTACAGTTAACAATAAAATAAACTCCAACATTGATATTGATTCAAT
TATGAAGGGCTTAGAGAAAGCCAAGAAGGCTATTTTCAAAGCCATGCCAA
ACCCATGGAGATTTGGAGGAGGAAGTGCTACTTTTCAAAGAAATGATTTT
GCACGTAAGCGATGTACCTCTTCCCAAAGTGCATTCAAAACTTTATTCAG
AAATAACACAACCAATTTCAAAGGGTTGGATAATGGTGACCTCATTATTG
ATTTTGTCTTGAAAGCTTTCCCTGTTGTTTCTGAGCTCCCACAATGGATT
GGTTGTTTTAAACCTTTAAGCTTTCTGAATGATTGTCTGGATATGTTAGG
TGGTCTACTTATGCAAGCTATTCCAAAGCTCTCAAATGAAAGACTGCAAG
ATATTGTTGATGAAGTTACAcgtttctcatcttttacaggTGAAATGGGT
GTCTCtgttgaaaatgaaaagatgGGAGAGGCTTTAGCTTTACTTAAGTC
GAAAATTTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035218XLOC_035218Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055933-proteinTCONS_00055933-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055933-exon-scaffold_266-1491911889:311507..311561TCONS_00055933-exon-scaffold_266-1491911889:311507..311561Clytia hemisphaericaexon
TCONS_00055933-exon-scaffold_266-1510915933:311507..311561TCONS_00055933-exon-scaffold_266-1510915933:311507..311561Clytia hemisphaericaexon
TCONS_00055933-exon-scaffold_266-1575043694:311507..311561TCONS_00055933-exon-scaffold_266-1575043694:311507..311561Clytia hemisphaericaexon
TCONS_00055933-exon-scaffold_266-1491911889:320676..322353TCONS_00055933-exon-scaffold_266-1491911889:320676..322353Clytia hemisphaericaexon
TCONS_00055933-exon-scaffold_266-1510915933:320676..322353TCONS_00055933-exon-scaffold_266-1510915933:320676..322353Clytia hemisphaericaexon
TCONS_00055933-exon-scaffold_266-1575043694:320676..322353TCONS_00055933-exon-scaffold_266-1575043694:320676..322353Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:311507..322353 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.80759 1.76102 0.284331 0.484471 2.65509 2.01364 5.30704 4.03778 4.66205 3.73832 2.92672 2.25756 1.99635 2.11433 1.54336 1.72762 4.8258 3.3914 0.757137 0.362536 4.42815 3.12098 5.77663 4.92396 9.54931 12.7233 0.553833 0.953863 3.36555 3.69996
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055933 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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