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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055797 ID=TCONS_00055797|Name=TCONS_00055797|organism=Clytia hemisphaerica|type=transcript|length=352bp
accacTTTATACTGATTTTACTGATGCACGTGATATAATCGAACAATATC
AAGAACATGTGACGACACAAGTCAACCACGATGGATTAAAACAGATTGTC
AATGTGTTATCGACGGTTTCCCAAAGTTTCAAACAAATCTATCTattCAT
AATGTAACTTACAAATCAATCAACAACGACATCGTGCGACTTTACAGACA
TTTCAACATATCTCCGAGCAGTATTCCACATGTTTTGAGTTCCTTAACAT
CATTCTCCAAAAACTCAAATTTGGCAACAGCTCTGAAGGAAGCTTCGTTT
ACCAAACTACTGAATGGCACAAGAAGAATTATCATATATTAGACAATACT
GT Run BLAST on NCBI transcript from alignment at scaffold_26:149785..150731+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055797 ID=TCONS_00055797|Name=TCONS_00055797|organism=Clytia hemisphaerica|type=transcript|length=947bp|location=Sequence derived from alignment at scaffold_26:149785..150731+ (Clytia hemisphaerica)
accacTTTATACTGATTTTACTGATGCACGTGATATAATCGTAAGTGCTA
TTGGAATCTTAACAAAGCGAGCTaggggactgggttcgagtttggcATGT
TGTATTTATGGTTAGTGTCAATGGAATTTATTTAGTCATTACCATCGATA
ATCTCTCTACTTGAATTGCTTTATTTATATACTTGACTCGTTTATTATCT
TGTAATGTGGGTGGGTATGATAATAGCCAATTGCTAGGGGATAATATCAG
CTGATGTGAATTAATTTTTGGATTCGAAATAGTATCGTGTCCTACAAAAG
GTCTATGCTCTTCCCTTTGTGAACACTACGACACTCGAAATTCAATCTAG
CACAGCACTCCAGCATATATTTATCAGAAGGTTGAACGATGTGCAAATGT
GAAGCTCTGCATCTAAAAAAATCGCTCAAAGCCTGGAGGATACAGGCTAT
TTGATGattgatcaaaatttaaataattCTTTCTTTTGCGATTTCTTCGA
AGGAACAATATCAAGAACATGTGACGACACAAGTCAACCACGATGGATTA
AAACAGATTGTCAATGTGTTATCGACGGTTTCCCAAAGTTTCAAACAAAT
CTATCTGTAAGAATTATTACCATTGTGATAAATTATCCAAGGTAGGAgca
attttgttttatttggctttatcattattttttgatatttgcgTACTCTT
ATCTGGTCTGAGAACGTACagagttttcttctttttcagattCATAATGT
AACTTACAAATCAATCAACAACGACATCGTGCGACTTTACAGACATTTCA
ACATATCTCCGAGCAGTATTCCACATGTTTTGAGTTCCTTAACATCATTC
TCCAAAAACTCAAATTTGGCAACAGCTCTGAAGGAAGCTTCGTTTACCAA
ACTACTGAATGGCACAAGAAGAATTATCATATATTAGACAATACTGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055797-exon-scaffold_26-1491911889:149785..149824 | TCONS_00055797-exon-scaffold_26-1491911889:149785..149824 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1510915933:149785..149824 | TCONS_00055797-exon-scaffold_26-1510915933:149785..149824 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1575043694:149785..149824 | TCONS_00055797-exon-scaffold_26-1575043694:149785..149824 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1491911889:150287..150390 | TCONS_00055797-exon-scaffold_26-1491911889:150287..150390 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1510915933:150287..150390 | TCONS_00055797-exon-scaffold_26-1510915933:150287..150390 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1575043694:150287..150390 | TCONS_00055797-exon-scaffold_26-1575043694:150287..150390 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1491911889:150524..150731 | TCONS_00055797-exon-scaffold_26-1491911889:150524..150731 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1510915933:150524..150731 | TCONS_00055797-exon-scaffold_26-1510915933:150524..150731 | Clytia hemisphaerica | exon |
| TCONS_00055797-exon-scaffold_26-1575043694:150524..150731 | TCONS_00055797-exon-scaffold_26-1575043694:150524..150731 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:149785..150731 + |
Blast
The following BLAST results are available for this feature:
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