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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055737 ID=TCONS_00055737|Name=TCONS_00055737|organism=Clytia hemisphaerica|type=transcript|length=559bp
atTTGATGACAATGAAAAACATGGGCAAATTgctaagaagaaaaaaactC
GGAAGTGTCCAACAACTGAATGTCCGTTCTGTGGCAAGGaacaaacaaac
ttaaaaaGTCATGCCATGAGAAAACATGGCTTAACAGAAGAGAACGCTCT
GGCAATGAAAAGCCAATATAACCTCTACAATGAACGCATCATAAAGAGCG
ACGATGATCGTAAATCGAAGAGGCGAATTCACCAACGAAGAACCTGCCCT
GTACTAGGTTGCTCGAAAACACCTAAAAGATTAAACAATCACTTGAGACA
AACTcacaaaataaagaagaaagaaCTATTTGACCGTCTCATGAAAAAGA
GTGAACTTGTGGAAAATTTCGACAGTGAAGACAGTGAAGTTGAAAATGAG
GATGAATCGGGGTCAGAGGAGGAGTCCGATTATGTGGccttcaaaaatat
tattgagAAAGAGAGAGACTATCTCGCCACTATTGACTCGAACTCTGACT
CCGACTCAGATTGTGACTGGTTACTTGAAACCACGAGAAGATGGAATGCT
AAGAAAGGT Run BLAST on NCBI transcript from alignment at scaffold_258:337323..338755- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055737 ID=TCONS_00055737|Name=TCONS_00055737|organism=Clytia hemisphaerica|type=transcript|length=1433bp|location=Sequence derived from alignment at scaffold_258:337323..338755- (Clytia hemisphaerica)
ATTTGATGACAATGAAAAACATGGGCAAATTGCTAAGAAGAAAAAAACTG
TAAGTAATTTTCGAATAATAGCTTTTCGTTCATAAACAGGGAAATCCTTA
GAGAAAATTGAACCATGTGGAGTTTCCTGGAAAAAAAGGCATTTTGGATA
TGGCAATTTTAGAGGGTAGGATTTCCTTTGACGAAATGTTAAACTACAGT
CTTGGGTTTGACTTTTGGATCAAAAAGGGCTTCAAATCCTGGGGTTGTCT
CGAACTTTTCGAAACCAAAGTTTGAGAACTGGCCTGTAGTTGTTGTGCCC
TTACCCTAAAGCAAAATACATGCCTTTCTCACAGACCCGCTAGGACCCCT
GTACACTGAAAAATAGGCCAAAAATCGTCCCGGTAGAAAGAAAAATTTCA
TTTTTCATTATTATAACTTCATTATTAAGTTAAAATCTTAATTTCAGCGG
AAGTGTCTAACAACTGGAANTGACAATGAGAAACATGGGCAAATGGCTAA
GAAGAAAAAAACTGTAAGTAATTTTCGAAAAATAGCTTTTCGTTCTTAAA
AACAGGGAAATCCATAGAGAAAATTGAACTATGCTGAGTTTCCTGGACAA
AAGGCATTTTGGAAATGGCAATTTTCGAGGGTAGGATTTCCTTTGACGAA
ATGTTAAACTACAGTCTTGGGTTTTCATGACTTTTGGATCAAAAAGGGCT
TCAAATCCTGGGGTCGTCTCGAACTTTTCAAAACCAAAGTTTGGGAACTG
GCCTGTAGTTGTGCCCTTCCCCTAAAGCAAATTACATGCCTTTCTCACAG
ACCCAGTAGGACCCCTGTACACTGAATAATAGGCCAAAAATCGTCCCGGT
AGAAAGAAAAACTTCATTTTTAATTATTATAACTTCATTATTAAGTTAAA
ATCTTAAAAATTCTTAATTTCAGCGGAAGTGTCCAACAACTGAATGTCCG
TTCTGTGGCAAGGAACAAACAAACTTAAAAAGTCATGCCATGAGAAAACA
TGGCTTAACAGAAGAGAACGCTCTGGCAATGAAAAGCCAATATAACCTCT
ACAATGAACGCATCATAAAGAGCGACGATGATCGTAAATCGAAGAGGCGA
ATTCACCAACGAAGAACCTGCCCTGTACTAGGTTGCTCGAAAACACCTAA
AAGATTAAACAATCACTTGAGACAAACTCACAAAATAAAGAAGAAAGAAC
TATTTGACCGTCTCATGAAAAAGAGTGAACTTGTGGAAAATTTCGACAGT
GAAGACAGTGAAGTTGAAAATGAGGATGAATCGGGGTCAGAGGAGGAGTC
CGATTATGTGGCCTTCAAAAATATTATTGAGAAAGAGAGAGACTATCTCG
CCACTATTGACTCGAACTCTGACTCCGACTCAGATTGTGACTGGTTACTT
GAAACCACGAGAAGATGGAATGCTAAGAAAGGT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055737-exon-scaffold_258-1575043694:338707..338755 | TCONS_00055737-exon-scaffold_258-1575043694:338707..338755 | Clytia hemisphaerica | exon |
| TCONS_00055737-exon-scaffold_258-1575043694:337323..337832 | TCONS_00055737-exon-scaffold_258-1575043694:337323..337832 | Clytia hemisphaerica | exon |
| TCONS_00055737-exon-scaffold_258-1510915933:338707..338755 | TCONS_00055737-exon-scaffold_258-1510915933:338707..338755 | Clytia hemisphaerica | exon |
| TCONS_00055737-exon-scaffold_258-1510915933:337323..337832 | TCONS_00055737-exon-scaffold_258-1510915933:337323..337832 | Clytia hemisphaerica | exon |
| TCONS_00055737-exon-scaffold_258-1491911889:338707..338755 | TCONS_00055737-exon-scaffold_258-1491911889:338707..338755 | Clytia hemisphaerica | exon |
| TCONS_00055737-exon-scaffold_258-1491911889:337323..337832 | TCONS_00055737-exon-scaffold_258-1491911889:337323..337832 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_258 | supercontig | scaffold_258:337323..338755 - |
Blast
The following BLAST results are available for this feature:
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