TCONS_00055683 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055683
Unique NameTCONS_00055683
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1786

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055683 ID=TCONS_00055683|Name=TCONS_00055683|organism=Clytia hemisphaerica|type=transcript|length=1786bp
CTAacactttctatttttttttcaacagatacaaaaataacaaaacaatt
aaaatatgAACGAAgtcaaaaaatgttaaagaaaaagttaatgatatGGA
TCTGGTCTCCATCAAAATTGAACCTGATGATGAGAATCAACATGTTGGCA
AAGAAGAGCATTCATTTACTGGCAGAAGCGTTAAAGATAGTTACTTAGAA
ATAACAATTGAAGAGGAAGATAATTCTTTGACTCCTAATGAAGAGGTACC
ATATCTTTTACTTCAATCAGATTCTTTTGATATTAATGATAAAACGGGTG
AAACAGTTGATTCAAAAGGATTTTCTTCGGAATCATCTGTTCCTTGTGAT
GATTCACAACAGGCTGATAGAAATCAAGATTCATCGAATGTTGCCAGTTT
GGTGATCGAAAAAAAGGAAACTCCAGGAAAGAAAAAGAGTGTTAACAATC
ACAAATGTGAAATATGTAATAAGACTTTCACTAAGAGATTCAGTTTAAAA
AGGCATCTTGTATTACACACTGGTGAAAAACCTTTTAAGTGCgaggaatg
tggtaaatgttttccATTTCAACACGAGCTAACACAGCATTCCATTAAAC
ATAGTGGAATTAAACCTTTTAAATGCGAAGAATGTGATGAATCTTTTCAA
AGCTACTATTTTCTAAAGAATCATCTTATTAAGGTGCATAATGGAGGACT
ACCTTTTAATTGTAAGGAATGTTGTAAATCTTTTCCTTGTCAAAGTGCTT
TAACACGGCATCTTATGGTACACAGCGACATTAGACCATGTaaatgtgaa
gaatgtggtaaatgttttcgGAGCAAGCAAAACCTAAAGGATCATCTTAG
AATTCACACTGGTGAAAAACCATTCAAgtgtgaagaatgtggtaaaagtT
TTCGTCAAAGAAGCAAATTAACACGACATTTAAATGTACACAGTGAAATT
AAACCATataaatgtcaagaatgtggtaaatgcttTGCAGAACAAAGAAG
TTTAACGCATCATACAGAGGCTCTTTGTGGAGTTATGCCATTAaaatgtg
aagaatgtggtagACGTTTCAAATATGTGGAAAGTCTATCAAAACATCAG
AAAACTCATGAAGCTAAGCCATGTCAACGTGAAAAGGTAGACTTAGAAAA
ATTGTTTGCATGGAAACAGAATTTTAATGACCATCAGGATAACAAACAAA
GCAGTTAAAgggggaaaaattaaaattgacgagctGGTGAAACATCTGGT
ATATTATTGTTACCTGGTAAATTTAAATATCTtcctgttttcaaaaatta
aattcgAAATGATTTTAATCTATTCTACtaaattcattttaaatgctttt
tgttgttgaaattttcaaaattgtttttaagtatGAACCCAAATGAAAAA
AGTTTACtatttccaagaagtattttaaGTTTAGTGTCTTCTTAGTTTAT
CGTATAGTTTTGCAATTGATAGTATGTAGTTTCACTTTGGACGgttaata
ttcatgatatgcactacTGCAAGGACTTCACACGAAATTAtacaactttt
ctgtttttggtccacccaatacgtcactttttctattgtttaattgacgt
attgggtggaaaatttcatgaattcatgatatgcaccattgcaatgtcca
AGGACTCAACAGCtgaaagacattgcaatgtCCAAGGACTCAACAGCtga
aagacattgcaatggtgcatatcatgaatactcaTGTTCATGATTGAATA
TTAATATTTTGATAACATGATAAAAAGTAAGCAAAG
Run BLAST on NCBI

protein sequence of TCONS_00055683-protein

>TCONS_00055683-protein ID=TCONS_00055683-protein|Name=TCONS_00055683-protein|organism=Clytia hemisphaerica|type=polypeptide|length=370bp
MDLVSIKIEPDDENQHVGKEEHSFTGRSVKDSYLEITIEEEDNSLTPNEE
VPYLLLQSDSFDINDKTGETVDSKGFSSESSVPCDDSQQADRNQDSSNVA
SLVIEKKETPGKKKSVNNHKCEICNKTFTKRFSLKRHLVLHTGEKPFKCE
ECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNG
GLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDH
LRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQ
RSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEAKPCQREKVDL
EKLFAWKQNFNDHQDNKQSS
Run BLAST on NCBI

transcript from alignment at scaffold_256:16394..18179

Legend: exonthree_prime_UTRCDSfive_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055683 ID=TCONS_00055683|Name=TCONS_00055683|organism=Clytia hemisphaerica|type=transcript|length=1786bp|location=Sequence derived from alignment at scaffold_256:16394..18179 (Clytia hemisphaerica)
CTTTGCTTACTTTTTATCATGTTATCAAAATATTAATATTCAATCATGAA
CAtgagtattcatgatatgcaccattgcaatgtctttcaGCTGTTGAGTC
CTTGGacattgcaatgtctttcaGCTGTTGAGTCCTtggacattgcaatg
gtgcatatcatgaattcatgaaattttccacccaatacgtcaattaaaca
atagaaaaagtgacgtattgggtggaccaaaaacagaaaagttgtaTAAT
TTCGTGTGAAGTCCTTGCAgtagtgcatatcatgaatattaacCGTCCAA
AGTGAAACTACATACTATCAATTGCAAAACTATACGATAAACTAAGAAGA
CACTAAACttaaaatacttcttggaaataGTAAACTTTTTTCATTTGGGT
TCatacttaaaaacaattttgaaaatttcaacaacaaaaagcatttaaaa
tgaatttaGTAGAATAGATTAAAATCATTTcgaatttaatttttgaaaac
aggaAGATATTTAAATTTACCAGGTAACAATAATATACCAGATGTTTCAC
CagctcgtcaattttaatttttcccccTTTAACTGCTTTGTTTGTTATCC
TGATGGTCATTAAAATTCTGTTTCCATGCAAACAATTTTTCTAAGTCTAC
CTTTTCACGTTGACATGGCTTAGCTTCATGAGTTTTCTGATGTTTTGATA
GACTTTCCACATATTTGAAACGTctaccacattcttcacatttTAATGGC
ATAACTCCACAAAGAGCCTCTGTATGATGCGTTAAACTTCTTTGTTCTGC
AaagcatttaccacattcttgacatttatATGGTTTAATTTCACTGTGTA
CATTTAAATGTCGTGTTAATTTGCTTCTTTGACGAAAacttttaccacat
tcttcacacTTGAATGGTTTTTCACCAGTGTGAATTCTAAGATGATCCTT
TAGGTTTTGCTTGCTCcgaaaacatttaccacattcttcacatttACATG
GTCTAATGTCGCTGTGTACCATAAGATGCCGTGTTAAAGCACTTTGACAA
GGAAAAGATTTACAACATTCCTTACAATTAAAAGGTAGTCCTCCATTATG
CACCTTAATAAGATGATTCTTTAGAAAATAGTAGCTTTGAAAAGATTCAT
CACATTCTTCGCATTTAAAAGGTTTAATTCCACTATGTTTAATGGAATGC
TGTGTTAGCTCGTGTTGAAATggaaaacatttaccacattcctcGCACTT
AAAAGGTTTTTCACCAGTGTGTAATACAAGATGCCTTTTTAAACTGAATC
TCTTAGTGAAAGTCTTATTACATATTTCACATTTGTGATTGTTAACACTC
TTTTTCTTTCCTGGAGTTTCCTTTTTTTCGATCACCAAACTGGCAACATT
CGATGAATCTTGATTTCTATCAGCCTGTTGTGAATCATCACAAGGAACAG
ATGATTCCGAAGAAAATCCTTTTGAATCAACTGTTTCACCCGTTTTATCA
TTAATATCAAAAGAATCTGATTGAAGTAAAAGATATGGTACCTCTTCATT
AGGAGTCAAAGAATTATCTTCCTCTTCAATTGTTATTTCTAAGTAACTAT
CTTTAACGCTTCTGCCAGTAAATGAATGCTCTTCTTTGCCAACATGTTGA
TTCTCATCATCAGGTTCAATTTTGATGGAGACCAGATCCatatcattaac
tttttctttaacattttttgacTTCGTTcatattttaattgttttgttat
ttttgtatctgttgaaaaaaaaatagaaagtgtTAG

Coding sequence (CDS) from alignment at scaffold_256:16394..18179

>TCONS_00055683 ID=TCONS_00055683|Name=TCONS_00055683|organism=Clytia hemisphaerica|type=CDS|length=1113bp|location=Sequence derived from alignment at scaffold_256:16394..18179 (Clytia hemisphaerica)
TTAACTGCTTTGTTTGTTATCCTGATGGTCATTAAAATTCTGTTTCCATG
CAAACAATTTTTCTAAGTCTACCTTTTCACGTTGACATGGCTTAGCTTCA
TGAGTTTTCTGATGTTTTGATAGACTTTCCACATATTTGAAACGTctacc
acattcttcacatttTAATGGCATAACTCCACAAAGAGCCTCTGTATGAT
GCGTTAAACTTCTTTGTTCTGCAaagcatttaccacattcttgacattta
tATGGTTTAATTTCACTGTGTACATTTAAATGTCGTGTTAATTTGCTTCT
TTGACGAAAacttttaccacattcttcacacTTGAATGGTTTTTCACCAG
TGTGAATTCTAAGATGATCCTTTAGGTTTTGCTTGCTCcgaaaacattta
ccacattcttcacatttACATGGTCTAATGTCGCTGTGTACCATAAGATG
CCGTGTTAAAGCACTTTGACAAGGAAAAGATTTACAACATTCCTTACAAT
TAAAAGGTAGTCCTCCATTATGCACCTTAATAAGATGATTCTTTAGAAAA
TAGTAGCTTTGAAAAGATTCATCACATTCTTCGCATTTAAAAGGTTTAAT
TCCACTATGTTTAATGGAATGCTGTGTTAGCTCGTGTTGAAATggaaaac
atttaccacattcctcGCACTTAAAAGGTTTTTCACCAGTGTGTAATACA
AGATGCCTTTTTAAACTGAATCTCTTAGTGAAAGTCTTATTACATATTTC
ACATTTGTGATTGTTAACACTCTTTTTCTTTCCTGGAGTTTCCTTTTTTT
CGATCACCAAACTGGCAACATTCGATGAATCTTGATTTCTATCAGCCTGT
TGTGAATCATCACAAGGAACAGATGATTCCGAAGAAAATCCTTTTGAATC
AACTGTTTCACCCGTTTTATCATTAATATCAAAAGAATCTGATTGAAGTA
AAAGATATGGTACCTCTTCATTAGGAGTCAAAGAATTATCTTCCTCTTCA
ATTGTTATTTCTAAGTAACTATCTTTAACGCTTCTGCCAGTAAATGAATG
CTCTTCTTTGCCAACATGTTGATTCTCATCATCAGGTTCAATTTTGATGG
AGACCAGATCCat
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035038XLOC_035038Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055683-proteinTCONS_00055683-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055683-exon-scaffold_256-1491911889:16394..18179TCONS_00055683-exon-scaffold_256-1491911889:16394..18179Clytia hemisphaericaexon
TCONS_00055683-exon-scaffold_256-1510915933:16394..18179TCONS_00055683-exon-scaffold_256-1510915933:16394..18179Clytia hemisphaericaexon
TCONS_00055683-exon-scaffold_256-1575043694:16394..18179TCONS_00055683-exon-scaffold_256-1575043694:16394..18179Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_256supercontigscaffold_256:16394..18179 .
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.60848	5.92145	1.87563	1.55342	0.555616	0.590817	0.403821	0.719295	0.292955	0.379458	0.308674	0.576658	0.0696633	0.310764	0.393876	0.206515	0.257131	0.620477	0.143489	0.124896	0.700271	0.624169	3.99665	3.94969	5.5729	5.31971	0.613568	0.383042	1.83182	2.09096
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
Blast
[Close]
BLAST of TCONS_00055683 vs. Swiss-Prot (Human)
Match: ZN273 (Zinc finger protein 273 OS=Homo sapiens GN=ZNF273 PE=1 SV=3)

HSP 1 Score: 217.624 bits (553), Expect = 4.173e-62
Identity = 110/250 (44.00%), Postives = 152/250 (60.80%), Query Frame = 3 
Query:  441 VNNHKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQ 1187
            VN +KCE C K F +  +L +H  +HT EKP+KCE+CGK F     LT+H I H+G KP+ CEEC + F  +  L  H I +H G  P+ C EC K+F   S LT+H  +H+  +P KCEECGK F     L  H  +HTGEKP+KCEECGK+F++ + LT+H  ++++ KPYKC+ECGK F+   +LT H     G  P KCEECG  F+   +L++H++ H   KP +    +  K F W      H+
Sbjct:  259 VNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKI-IHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCN--ECGKAFNWSSTLTKHK 505

HSP 2 Score: 210.305 bits (534), Expect = 2.069e-59
Identity = 109/228 (47.81%), Postives = 140/228 (61.40%), Query Frame = 3 
Query:  441 VNNHKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHE-AKP 1121
            VN +KC+ C K F +  +L +H ++H    P+KCEECGK F     LT+H   H+  KP+KCE+C + F  +  L  H I +H G  P+NC+EC K F   S LT+H ++H+  +P KC ECGK F     L  H RIHTGEKP+KCEECGK+F Q S LTRH  VH+  KPYKC+ECGK F    +LT H        P KCEECG+ F    +L+KH+  H  AKP
Sbjct:  231 VNFYKCKTCGKAFNQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKI-IHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKP 457

HSP 3 Score: 209.92 bits (533), Expect = 2.936e-59
Identity = 113/249 (45.38%), Postives = 149/249 (59.84%), Query Frame = 3 
Query:  450 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQDN 1193
            + CE C K F+   +L +H ++HTGEKP+KC ECGK F +   LT+H   H+G KP+KCEEC ++F     L  H I VH G  P+ C+EC K+F   + LT+H  +++  +P KCEECGK F     L  H  IHTG KP+KCEECG +FR  S LT H  VH+  KPYKC ECGK F    +LT H     G  P KCEECG+ F    +L++H+K H   KP + ++ D    F    NF+ H+ N
Sbjct:  318 YNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKI-VHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNRSSNLTRHKKIHTGEKPYKPKRCD--SAFDNTPNFSRHKRN 563

HSP 4 Score: 209.149 bits (531), Expect = 5.242e-59
Identity = 111/247 (44.94%), Postives = 148/247 (59.92%), Query Frame = 3 
Query:  450 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQ 1187
            +KCE C K F+    L +H ++HTG KP+ CEECGK F     LT+H I H+G KP+KC EC ++F     L  H  ++H G  P+ C+EC K+F   S LTRH +VH+  +P KCEECGK F+    L  H RI+T EKP+KCEECGK+F   S LT+H  +H+  KPYKC+ECG  F    +LT H     G  P KC ECG+ F +  +L+KH++ H   KP + E  +  K F    N   H+
Sbjct:  290 YKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHK-RIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHKRIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCE--ECGKAFNRSSNLTRHK 533

HSP 5 Score: 199.904 bits (507), Expect = 1.121e-55
Identity = 99/220 (45.00%), Postives = 137/220 (62.27%), Query Frame = 3 
Query:  450 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTH 1109
            +KC  C K F    +L +H  +HTGEKP+KCEECGK F     LT+H I H+G KP+KCEEC ++F+    L  H  +++    P+ C+EC K+F   S LT+H ++H+  +P KCEECG  FR+   L +H R+HTGEKP+KC ECGK+F   S LT+H  +H+  KPYKC+ECGK F    +LT H +   G  P K + C   F    + S+H++ H
Sbjct:  346 YKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNQSSTLTRHKIVHTGEKPYKCEECGKAFKRSTTLTKHK-RIYTKEKPYKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHKRIHTGEKPYKCEECGKAFNRSSNLTRHKKIHTGEKPYKPKRCDSAFDNTPNFSRHKRNH 564

HSP 6 Score: 139.428 bits (350), Expect = 4.350e-35
Identity = 80/199 (40.20%), Postives = 109/199 (54.77%), Query Frame = 3 
Query:  519 TGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA 1115
            T  K F+C++  K          H  + +G KPFKC+EC +S      L  H          + CK C K+F   S LT+H ++H ++ P KCEECGK F     L  H +IHT EKP+KCE+CGK F   S LT+H  +H+  KPY C+ECGK F+   +LT H     G  P KC ECG+ F +  +L+KH++ H  
Sbjct:  173 TQSKIFQCDKYVKVLHKFSNSNIHKKRQTGKKPFKCKECGKSCCILSQLTQHKKTATRVNF-YKCKTCGKAFNQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCNECGKAFNWSSTLTKHKRIHTG 370

HSP 7 Score: 121.324 bits (303), Expect = 5.532e-29
Identity = 74/189 (39.15%), Postives = 97/189 (51.32%), Query Frame = 3 
Query:  630 ECDESFQSYYFLKNHLI--KVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEKPFKCEECGKSFRQRSKLTRHLNVHSEIKPYKCQECGKCFAEQRSLTHHTEALCGVMPLKCEECGRRFKYVESLSKHQKTHEA-KPCQREKVDLEKLFAWKQNFNDHQ 1187
            +CD+  +  +   N  I  K   G  PF CKEC KS    S LT+H    + +   KC+ CGK F    NL  H  IH    P+KCEECGK+F Q   LT+H  +H+E KPYKC++CGK F+    LT H     G  P  CEECG+ F    +L+KH+  H   KP +    +  K F W      H+
Sbjct:  179 QCDKYVKVLHKFSNSNIHKKRQTGKKPFKCKECGKSCCILSQLTQHKKTATRVNFYKCKTCGKAFNQFSNLTKHKIIHPEVNPYKCEECGKAFNQSLTLTKHKKIHTEEKPYKCEDCGKVFSVFSVLTKHKIIHTGTKPYNCEECGKGFSIFSTLTKHKIIHTGEKPYKCN--ECGKAFNWSSTLTKHK 365

HSP 8 Score: 111.309 bits (277), Expect = 1.296e-25
Identity = 59/140 (42.14%), Postives = 81/140 (57.86%), Query Frame = 3 
Query:  450 HKCEICNKTFTKRFSLKRHLVLHTGEKPFKCEECGKCFPFQHELTQHSIKHSGIKPFKCEECDESFQSYYFLKNHLIKVHNGGLPFNCKECCKSFPCQSALTRHLMVHSDIRPCKCEECGKCFRSKQNLKDHLRIHTGEK 869
            +KCE C K F+   +L +H ++HTG KP+KCEECG  F     LT+H   H+G KP+KC EC ++F     L  H  ++H G  P+ C+EC K+F   S LTRH  +H+  +P K + C   F +  N   H R H GEK
Sbjct:  430 YKCEECGKAFSVFSTLTKHKIIHTGAKPYKCEECGSAFRAFSTLTEHKRVHTGEKPYKCNECGKAFNWSSTLTKHK-RIHTGEKPYKCEECGKAFNRSSNLTRHKKIHTGEKPYKPKRCDSAFDNTPNFSRHKRNHMGEK 568
The following BLAST results are available for this feature:
BLAST of TCONS_00055683 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ZN2734.173e-6244.00Zinc finger protein 273 OS=Homo sapiens GN=ZNF273 ... [more]
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