TCONS_00055557 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055557
Unique NameTCONS_00055557
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1225

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055557 ID=TCONS_00055557|Name=TCONS_00055557|organism=Clytia hemisphaerica|type=transcript|length=1225bp
ctggcagcctggacacttcaaaaaaggtcggatttggccgaaatttggca
cacttgttccttgggtgaatatctgggggtgtttttttcattttttgaaa
aNGCATAAAGCTGACTATATGAGGGACGAGATCGAGCGAGGGCACGGTTA
CGTCGAGTGCGTTGTCAACTATATCGAATATTTGGTTGGTTTGGAGCAAT
CAACCTCCAAGATGTCTTCTTCTGAAGGCCTTCAAGAGATCTTTCAAATC
ACATCAGATAGTTTGAAACTAGTGGAGTACCTTGTTTCGACTTATGGTCG
AAAAATTGACCCCCTGATAAATACGTATGACAAAAGGTTTctgtttttat
gcttGCGGTTGCAATCCATCCTCAATTTGAAGTTGTATAAAATGAAGAAA
gaacaaacaaagaaaaacagcaAGATTTTGTCAGAGTATTATCGGCAATA
TAAACCAATGAACGCGATTGGTCGATCACCTTATTCTAAACCAAATCAAC
GAGGCAGCACTGGTACACCATCCCCCTCCTCCCCCATTTCTGACCCCTCC
CCTGGTGGGAGCGTGGCATCTACTGGAAGCGCCGGTAGCAATAGTAGTAG
TAATGGGGTCACCATACCATGTGATATGCATGAGAAGAGTTATCAATACC
TTTCTAATACCAAATATCTTGTCAACGGGCACAGACTTTGGGATGACTCT
GAAAGTTTGACCAATCAAGTGCAAGgTTTCATCCAAAGTTTGTCGAAGAA
AGCAGGGATACTCACCATGCAGAGCACGACGCTACATATCGTCGATTTCA
CTCGTCAAGGACTATTAATCATACAAGAATCGAGAAAAGCTGCTGTCTCC
TGacatttgtgagtattttgggTGCTTGGATGCGTTCGTCCTGTGTACAA
ATTCTCTCATCTTTCAACAAATTAACATATTAAAGCTTACACAccaaaaa
tgagattttgtttATAGTATTTCTTACAGTCCACGTTCCAGAGggctttt
aatttaaaaaacacCCCCGTTCGAAAAAAGTATAATATTTTGTCTCTTTA
TAAATATCTATTAATAATTATAGTATTACGAATTTTGCTAAAAAGCATTC
GgattatcaaattttttaaaaagtaatgtCTCCATCGATattttgtttgt
tgttgaattttgaagggaaaaACGTCTGGAGGTCTCAAATTGTAACGAGG
TTTTGTACATTCTATTCAATATTAG
Run BLAST on NCBI

protein sequence of TCONS_00055557-protein

>TCONS_00055557-protein ID=TCONS_00055557-protein|Name=TCONS_00055557-protein|organism=Clytia hemisphaerica|type=polypeptide|length=283bp
WQPGHFKKGRIWPKFGTLVPWVNIWGCFFHFLKXHKADYMRDEIERGHGY
VECVVNYIEYLVGLEQSTSKMSSSEGLQEIFQITSDSLKLVEYLVSTYGR
KIDPLINTYDKRFLFLCLRLQSILNLKLYKMKKEQTKKNSKILSEYYRQY
KPMNAIGRSPYSKPNQRGSTGTPSPSSPISDPSPGGSVASTGSAGSNSSS
NGVTIPCDMHEKSYQYLSNTKYLVNGHRLWDDSESLTNQVQGFIQSLSKK
AGILTMQSTTLHIVDFTRQGLLIIQESRKAAVS
Run BLAST on NCBI

transcript from alignment at scaffold_253:1079854..1085228-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055557 ID=TCONS_00055557|Name=TCONS_00055557|organism=Clytia hemisphaerica|type=transcript|length=5375bp|location=Sequence derived from alignment at scaffold_253:1079854..1085228- (Clytia hemisphaerica)
CTGGCAGCCTGGACACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCA
CACTTGTTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAA
ANGCATAAAGCTGACTATATGGTATGTCAACTTCATAGTATTGCATTTTA
AAAAACGTTACAATGTACTTGCGTATTAAAGTAGATATGATGAACACAAG
ATAAATCTGTTTTTTTTTAAATCATTCTACGAAAGCATTCTATTTTATGA
TTCAAAGAAAATTGGCAATCCGCACATGATACATGTAACTTCGCTGATTT
CAAATATTGTTTTTAGGTTTTCATAACTTTCTTGAAGCAAAAGTTACAAC
CCTTCAAAGTGGGTCCATTTTGGCCATTTTTGTCAATTTGTGGCCATTTT
TAGCCTACTTTGAAGGGTTGTAACTTTTCTCTAAGAAAGAAAACATATTT
GAAATCAGCGAAGTTTCAATTTCCAGAAAAGTATAAATTCATAATCTTCA
TTTTTCTATCTTTCATTTTCGAATTTTTTGAAAGGATTTGAAGTCTTAAA
ATCATCCGCCTAACATTATCTTTTCAACGGAGGTATTGCTTTTAGAGCAA
TGTATCAAAATGTTTTTTTGGAACAGCCTTTAGGTGTTTCTAAATTTTGG
TTATCAGTCACCTAATTTTTATTTGTATTTCCCATCAGTCTTTTCCCTAC
CCTAATGATTTATGATTGAGGTTTTTGCTATTATGATTTGAATTATTTTT
CTTTGTCAGAGGGACGAGATCGAGCGAGGGCACGGTTACGTCGAGTGCGT
TGTCAACTATATCGAATATTTGGTTGGTTTGGAGCAATCAACCTCCAAGA
TGTCTTCTTCTGAAGGCCTTCAAGAGATCTTTCAAATCACATCAGATAGT
TTGAAACTAGTGGAGTAAGTCCTGTTTGTACTTTTTGTGCCTTTGATGAA
ATTTTTCAGTCATTTTGAAATCTAGATCTTGAATGATGAAATGCTATGTT
CTTGATATTTATAAATTAACGTAATGAAATGATCAAACTAAACTTTAGCC
GGTTTCAGAAAGAATCATTTTTTCATTTTAGTGATAGCCCACTATTAATG
ATTTCCATGTAATTTTAGGTACCTTGTTTCGACTTATGGTCGAAAAATTG
ACCCCCTGATAAATACGTATGACAAAAGGTTTCTGTTTTTATGGTAAGTT
TTAATTCGTCTGTGTCTTACTGTATTTGAAGAAAAAATGAATGATTTAAC
TTACAAAGAAAGAATCGTTTCGAAGTCATCACTCGCGTAACAGTTGCGTT
TTATTCCAAAACAAAACGAACCAATTAATGCCCAGAGATGGATTTATTGT
TTTGGAACAAACAGGAACTGTAACCGGCTGAAAGTGTAGCGAGTTCAAAA
ATATCGCGAAGTAGAATAGAAGCTACTGCGTAAAAGATACCGCGACGTTA
CCGTGCTTTTTCTTTTTTAGCTTGCGGTTGCAATCCATCCTCAATTTGAA
GTTGTATAAAATGAAGAAAGAACAAACAAAGAAAAACAGCAAGGTACGAA
AAATGAAAGGGTTTGATGATGTGAACACCAAACTCGAAACGTCAAAAAGC
ATACCTTACAAAACGGTTTCGTTCAACTATGAACTATGAATCTTTTCCGT
TTTCTTGCTCCGAACCCTTCCAAACCCAATATGAACGATTCTTAATTGTA
ACGGAAACCGTACCGGAGCAATGTAAAACTTTGACATCTGAGATCTATAG
TTTTTCTCTTATTTGACACATTTCTAATGTATTTCACCTTCACTTCTCTC
TTTCAGATTTTGTCAGAGTATTATCGGGTAAGTAACTAGCCCTTCAGTTG
ATTTCAAGGAATAATCGGTAACATTTCTGGTCTAGGTATAACACCTACAG
TCTTGGCCGAAACCGTACCAAAATTTATTTGTTATTTCATTTTCTTCCCA
TTTTGCGATCTAGGTTCTAATTTTTATTGGCGCAAATTCGATTAAAATCT
CAATCTCGATTTTGAAAAGGCATTAAGCAGAAATAATTGTATTGGAGGTT
TTCTACGGAGAGCCATAGCCCAGAATAATCACCATTGATTATGCGCTTTT
AAAAGTTTTCATTTAAATTGTTGTAAATTGGAAATAATAATACCTTCTTT
CATCATTTCAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTTAT
TCTAAACCAAATCAACGAGGGTAAAAGATCATTCAATATCTAACTTTTCC
TTTGCTGCGCCTCACTTGTGACAATGTAATCATCACAAGTCAAAATACTA
CCCCTGTTCTTAGAAGGGAAGTTCTTCATCGGGAAATTGGTTAATGTTTT
CTGCCACAATTCCTTAGAATTTCTTTTCATTGCTGTTGCTTTGAATCCAT
ATTGCATTATGAATAAGAGAGATATACAATGGGAGCAACAAATTTTTAAC
TCGACTTTTTCTTCATTACAGCAGCACTGGTACACCATCCCCCTCCTCCC
CCATTTCTGACCCCTCCCCTGGTGGGAGCGTGGCATCTACTGGAAGCGCC
GGTAGCAATAGTAGTAGTAATGGGGTCACCATACCATGTGATATGCATGA
GAAGAGTTATCAATACCTTTCTAATACCAAATATCTTGTCAACGGGCACA
GACTTTGGGATGACTCTGAAAGTTTGACCAATCAAGTGCAAGGTTTGTTA
TTTTGGATTAGTACTATATTTTCTTTTACACTATCGTTTGATACTAATGA
TACTTAATCTCAAATTGTTCCCTTGTGCTCTGAATTTTTTATTTTTTTGG
ACCTACCCCGGTGGAGGTCCTATAAATTAACCTTTGTCCGTTTGTCCGTT
CGTTCGTTAGTTATTAGCTTTCCTCGCGATTGGCTCGTTAGTTTTTTCTG
ATTTTTTGCACAAAGATGCTTAACTATAAACCCTCGAATGTGACGGAGCC
CGATTTTCAAAAAAAAAGATTTTTGGGCAAAATTGGGCAAAAAAACGGCT
AAAAAACGGGTTTTTTGGACTTTGTGAAAAATTAGGTCGTTAATTTTTTC
TGATTTTTTGTATGAAAGTAGGGTACCATCGTAGGTAAAAGATGGTTTAA
GCAGATTTTTGCAAGAAAATTTTGTTGGCTCAAAAAACGCATGTTTATCT
ATAAGAATCACTATTAATAAGCATACATCAATGTTCTTAGTCAAATTACT
CAATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNTTTTTCTCATGAGGGCTTACTTTTAAAGAATATGTGTGTTTCGACAT
GAAATTTTGGTTGCTTGGCGTGTTTTTATAGAAAAACTGGCCAAATTCTA
TATATTCTTATAAGCGCATTATCAATTACTTAGGTATTAGCTTTTCTCGA
GATTGGCTCTTTCATTCTTTATGATTTTTTGAACAACAAAGATGCATAAC
TATAAACCCTCGAATGTGACGGAGCCCGATTTTCGAAGAAAAAAACTTGG
GGGCAAATTTGGGCCAAAAAACGGCTAAAAAATGGTTTTTTTGGACTTTG
TGAAAAATTGGATCATTAATTTTTTCTGATTTTTTGCAGGAAAGTAGGGT
ACCATCATACGTAAAAGATGGTTCAAGCAGATTTTTGCAAAAAAATTTTG
TTGGCTCAAAATACGCATGTTTATCTATAAGAATCACTATTAATAAGCAT
ACATCAATGTTCTTAGTCAAATTACTCAATTTTTTTTATGAGATAGATGT
TTTTTTGCTCACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNTTTTTATAGAAAAACTGGCCAAATTCGATATTTTTTTATAAGCACA
CTATCAATTACTTAGGTATTAGCTTTTCTCGAGATTGGCTCTTTTATTCT
TTATCATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGCGACG
GAGCTCGATTTTTGGAGAAAAAAATTTTGGGGTAAATTTCAGCTAAAAAA
TGGCTAAAAAAAGGGTTTTTTGGACTTGTTTTTTTTCTGAATTTTTGCAT
GAAAGTAGATTAAAGATGGCTCAAGCAGATTTTTGTAAAAAAAAGAATTT
TTCAGCTCAAAAAGCGCATATTTATCTATAAGAATCACTATTAATAAGCA
TACATCAATGTTCTGAAAATTACTGAATTTTTTGATGAGATATGTATTTT
TGGTCTCGAAGTATTGAATATGAAAGAATATTTTCAAGAGCATGAAATTT
TGCTTTTTAAACGTGTTTTTTTTATAAGAAACAAACGACTAATTTTGATA
GATCGTCACTATTTGTGTTCTAAATGATTGTTTAATGGTCACGCTTATGT
AGATATTAATTATACATTATATATATGTGTTAAATGCATAACCAGGTAGG
TCCATAAAAGTATCACTTGTTTATTTTTTATCAGGTTTCATCCAAAGTTT
GTCGAAGAAAGCAGGGATACTCACCATGCAGAGGTACTTGGTTAATTTAT
AATTTTTAGGGTGGTCTTCATTTTTCTTTTGCTTTTTCTTCGTCCTCACC
TTTTGTTTCGATACCCTATATATCTTGATTGTAAGCAATCTTAGATCTAC
ACTCACTGTTGTTACCTATCTACCCTCATCTTCGAATTCCTTGCGAACGA
TAAACGTGAAATACCTTTGGTACTGAGTTTCGCAGACCTGGATGAACCGT
CTGAATATCATATTTGCGTGTTTTCAATTCTGAAACGTGTCATAAACATA
TTCCTTTTTTTCATTTTCATCCAGCACGACGCTACATATCGTCGATTTCA
CTCGTCAAGGACTATTAATCATACAAGAATCGAGAAAAGCTGCTGTCTCC
TGACATTTGTGAGTATTTTGGGTGCTTGGATGCGTTCGTCCTGTGTACAA
ATTCTCTCATCTTTCAACAAATTAACATATTAAAGCTTACACACCAAAAA
TGAGATTTTGTTTATAGTATTTCTTACAGTCCACGTTCCAGAGGGCTTTT
AATTTAAAAAACACCCCCGTTCGAAAAAAGTATAATATTTTGTCTCTTTA
TAAATATCTATTAATAATTATAGTATTACGAATTTTGCTAAAAAGCATTC
GGATTATCAAATTTTTTAAAAAGTAATGTCTCCATCGATATTTTGTTTGT
TGTTGAATTTTGAAGGGAAAAACGTCTGGAGGTCTCAAATTGTAACGAGG
TTTTGTACATTCTATTCAATATTAG

Coding sequence (CDS) from alignment at scaffold_253:1079854..1085228-

>TCONS_00055557 ID=TCONS_00055557|Name=TCONS_00055557|organism=Clytia hemisphaerica|type=CDS|length=7668bp|location=Sequence derived from alignment at scaffold_253:1079854..1085228- (Clytia hemisphaerica)
CACGACGCTACATATCGTCGATTTCACTCGTCAAGGACTATTAATCATAC
AAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCATCCAAAGTTTGTCGA
AGAAAGCAGGGATACTCACCATGCAGAGCAGCACTGGTACACCATCCCCC
TCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGCGTGGCATCTACTGG
AAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCACCATACCATGTGATA
TGCATGAGAAGAGTTATCAATACCTTTCTAATACCAAATATCTTGTCAAC
GGGCACAGACTTTGGGATGACTCTGAAAGTTTGACCAATCAAGTGCAAGC
AATATAAACCAATGAACGCGATTGGTCGATCACCTTATTCTAAACCAAAT
CAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGGTTGCAATCCATCCT
CAATTTGAAGTTGTATAAAATGAAGAAAGAACAAACAAAGAAAAACAGCA
AGGTACCTTGTTTCGACTTATGGTCGAAAAATTGACCCCCTGATAAATAC
GTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAGATCGAGCGAGGGCA
CGGTTACGTCGAGTGCGTTGTCAACTATATCGAATATTTGGTTGGTTTGG
AGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCCTTCAAGAGATCTTT
CAAATCACATCAGATAGTTTGAAACTAGTGGATGGCAGCCTGGACACTTC
AAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTTGTTCCTTGGGTGAA
TATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCATAAAGCTGACTATA
TGCACGACGCTACATATCGTCGATTTCACTCGTCAAGGACTATTAATCAT
ACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCATCCAAAGTTTGTC
GAAGAAAGCAGGGATACTCACCATGCAGAGCAGCACTGGTACACCATCCC
CCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGCGTGGCATCTACT
GGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCACCATACCATGTGA
TATGCATGAGAAGAGTTATCAATACCTTTCTAATACCAAATATCTTGTCA
ACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGACCAATCAAGTGCAA
GCAATATAAACCAATGAACGCGATTGGTCGATCACCTTATTCTAAACCAA
ATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGGTTGCAATCCATC
CTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAAACAAAGAAAAACAG
CAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTGACCCCCTGATAAAT
ACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAGATCGAGCGAGGG
CACGGTTACGTCGAGTGCGTTGTCAACTATATCGAATATTTGGTTGGTTT
GGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCCTTCAAGAGATCT
TTCAAATCACATCAGATAGTTTGAAACTAGTGGATGGCAGCCTGGACACT
TCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTTGTTCCTTGGGTG
AATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCATAAAGCTGACTA
TATGCACGACGCTACATATCGTCGATTTCACTCGTCAAGGACTATTAATC
ATACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCATCCAAAGTTTG
TCGAAGAAAGCAGGGATACTCACCATGCAGAGCAGCACTGGTACACCATC
CCCCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGCGTGGCATCTA
CTGGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCACCATACCATGT
GATATGCATGAGAAGAGTTATCAATACCTTTCTAATACCAAATATCTTGT
CAACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGACCAATCAAGTGC
AAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTTATTCTAAACC
AAATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGGTTGCAATCCA
TCCTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAAACAAAGAAAAAC
AGCAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTGACCCCCTGATAA
ATACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAGATCGAGCGAG
GGCACGGTTACGTCGAGTGCGTTGTCAACTATATCGAATATTTGGTTGGT
TTGGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCCTTCAAGAGAT
CTTTCAAATCACATCAGATAGTTTGAAACTAGTGGATGGCAGCCTGGACA
CTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTTGTTCCTTGGG
TGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCATAAAGCTGAC
TATATGCACGACGCTACATATCGTCGATTTCACTCGTCAAGGACTATTAA
TCATACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCATCCAAAGTT
TGTCGAAGAAAGCAGGGATACTCACCATGCAGAGCAGCACTGGTACACCA
TCCCCCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGCGTGGCATC
TACTGGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCACCATACCAT
GTGATATGCATGAGAAGAGTTATCAATACCTTTCTAATACCAAATATCTT
GTCAACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGACCAATCAAGT
GCAAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTTATTCTAAA
CCAAATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGGTTGCAATC
CATCCTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAAACAAAGAAAA
ACAGCAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTGACCCCCTGAT
AAATACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAGATCGAGCG
AGGGCACGGTTACGTCGAGTGCGTTGTCAACTATATCGAATATTTGGTTG
GTTTGGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCCTTCAAGAG
ATCTTTCAAATCACATCAGATAGTTTGAAACTAGTGGATGGCAGCCTGGA
CACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTTGTTCCTTG
GGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCATAAAGCTG
ACTATATGCACGACGCTACATATCGTCGATTTCACTCGTCAAGGACTATT
AATCATACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCATCCAAAG
TTTGTCGAAGAAAGCAGGGATACTCACCATGCAGAGCAGCACTGGTACAC
CATCCCCCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGCGTGGCA
TCTACTGGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCACCATACC
ATGTGATATGCATGAGAAGAGTTATCAATACCTTTCTAATACCAAATATC
TTGTCAACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGACCAATCAA
GTGCAAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTTATTCTA
AACCAAATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGGTTGCAA
TCCATCCTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAAACAAAGAA
AAACAGCAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTGACCCCCTG
ATAAATACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAGATCGAG
CGAGGGCACGGTTACGTCGAGTGCGTTGTCAACTATATCGAATATTTGGT
TGGTTTGGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCCTTCAAG
AGATCTTTCAAATCACATCAGATAGTTTGAAACTAGTGGATGGCAGCCTG
GACACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTTGTTCCT
TGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCATAAAGC
TGACTATATGCACGACGCTACATATCGTCGATTTCACTCGTCAAGGACTA
TTAATCATACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCATCCAA
AGTTTGTCGAAGAAAGCAGGGATACTCACCATGCAGAGCAGCACTGGTAC
ACCATCCCCCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGCGTGG
CATCTACTGGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCACCATA
CCATGTGATATGCATGAGAAGAGTTATCAATACCTTTCTAATACCAAATA
TCTTGTCAACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGACCAATC
AAGTGCAAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTTATTC
TAAACCAAATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGGTTGC
AATCCATCCTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAAACAAAG
AAAAACAGCAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTGACCCCC
TGATAAATACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAGATCG
AGCGAGGGCACGGTTACGTCGAGTGCGTTGTCAACTATATCGAATATTTG
GTTGGTTTGGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCCTTCA
AGAGATCTTTCAAATCACATCAGATAGTTTGAAACTAGTGGATGGCAGCC
TGGACACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTTGTTC
CTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCATAAA
GCTGACTATATGCACGACGCTACATATCGTCGATTTCACTCGTCAAGGAC
TATTAATCATACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCATCC
AAAGTTTGTCGAAGAAAGCAGGGATACTCACCATGCAGAGCAGCACTGGT
ACACCATCCCCCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGCGT
GGCATCTACTGGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCACCA
TACCATGTGATATGCATGAGAAGAGTTATCAATACCTTTCTAATACCAAA
TATCTTGTCAACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGACCAA
TCAAGTGCAAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTTAT
TCTAAACCAAATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGGTT
GCAATCCATCCTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAAACAA
AGAAAAACAGCAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTGACCC
CCTGATAAATACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAGAT
CGAGCGAGGGCACGGTTACGTCGAGTGCGTTGTCAACTATATCGAATATT
TGGTTGGTTTGGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCCTT
CAAGAGATCTTTCAAATCACATCAGATAGTTTGAAACTAGTGGATGGCAG
CCTGGACACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTTGT
TCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCATA
AAGCTGACTATATGCACGACGCTACATATCGTCGATTTCACTCGTCAAGG
ACTATTAATCATACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTCAT
CCAAAGTTTGTCGAAGAAAGCAGGGATACTCACCATGCAGAGCAGCACTG
GTACACCATCCCCCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGAGC
GTGGCATCTACTGGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTCAC
CATACCATGTGATATGCATGAGAAGAGTTATCAATACCTTTCTAATACCA
AATATCTTGTCAACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGACC
AATCAAGTGCAAGCAATATAAACCAATGAACGCGATTGGTCGATCACCTT
ATTCTAAACCAAATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGCGG
TTGCAATCCATCCTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAAAC
AAAGAAAAACAGCAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTGAC
CCCCTGATAAATACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACGAG
ATCGAGCGAGGGCACGGTTACGTCGAGTGCGTTGTCAACTATATCGAATA
TTTGGTTGGTTTGGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGGCC
TTCAAGAGATCTTTCAAATCACATCAGATAGTTTGAAACTAGTGGATGGC
AGCCTGGACACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACACTT
GTTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANGCA
TAAAGCTGACTATATGCACGACGCTACATATCGTCGATTTCACTCGTCAA
GGACTATTAATCATACAAGAATCGAGAAAAGCTGCTGTCTCCTGAGTTTC
ATCCAAAGTTTGTCGAAGAAAGCAGGGATACTCACCATGCAGAGCAGCAC
TGGTACACCATCCCCCTCCTCCCCCATTTCTGACCCCTCCCCTGGTGGGA
GCGTGGCATCTACTGGAAGCGCCGGTAGCAATAGTAGTAGTAATGGGGTC
ACCATACCATGTGATATGCATGAGAAGAGTTATCAATACCTTTCTAATAC
CAAATATCTTGTCAACGGGCACAGACTTTGGGATGACTCTGAAAGTTTGA
CCAATCAAGTGCAAGCAATATAAACCAATGAACGCGATTGGTCGATCACC
TTATTCTAAACCAAATCAACGAGGATTTTGTCAGAGTATTATCGGCTTGC
GGTTGCAATCCATCCTCAATTTGAAGTTGTATAAAATGAAGAAAGAACAA
ACAAAGAAAAACAGCAAGGTACCTTGTTTCGACTTATGGTCGAAAAATTG
ACCCCCTGATAAATACGTATGACAAAAGGTTTCTGTTTTTATGAGGGACG
AGATCGAGCGAGGGCACGGTTACGTCGAGTGCGTTGTCAACTATATCGAA
TATTTGGTTGGTTTGGAGCAATCAACCTCCAAGATGTCTTCTTCTGAAGG
CCTTCAAGAGATCTTTCAAATCACATCAGATAGTTTGAAACTAGTGGATG
GCAGCCTGGACACTTCAAAAAAGGTCGGATTTGGCCGAAATTTGGCACAC
TTGTTCCTTGGGTGAATATCTGGGGGTGTTTTTTTCATTTTTTGAAAANG
CATAAAGCTGACTATATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034942XLOC_034942Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055557-exon-scaffold_253-1575043694:1085108..1085228TCONS_00055557-exon-scaffold_253-1575043694:1085108..1085228Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1084315..1084469TCONS_00055557-exon-scaffold_253-1575043694:1084315..1084469Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1084036..1084110TCONS_00055557-exon-scaffold_253-1575043694:1084036..1084110Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1083686..1083758TCONS_00055557-exon-scaffold_253-1575043694:1083686..1083758Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1083402..1083422TCONS_00055557-exon-scaffold_253-1575043694:1083402..1083422Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1083009..1083067TCONS_00055557-exon-scaffold_253-1575043694:1083009..1083067Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1082537..1082757TCONS_00055557-exon-scaffold_253-1575043694:1082537..1082757Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1080596..1080644TCONS_00055557-exon-scaffold_253-1575043694:1080596..1080644Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1575043694:1079854..1080304TCONS_00055557-exon-scaffold_253-1575043694:1079854..1080304Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1085108..1085228TCONS_00055557-exon-scaffold_253-1510915933:1085108..1085228Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1084315..1084469TCONS_00055557-exon-scaffold_253-1510915933:1084315..1084469Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1084036..1084110TCONS_00055557-exon-scaffold_253-1510915933:1084036..1084110Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1083686..1083758TCONS_00055557-exon-scaffold_253-1510915933:1083686..1083758Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1083402..1083422TCONS_00055557-exon-scaffold_253-1510915933:1083402..1083422Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1083009..1083067TCONS_00055557-exon-scaffold_253-1510915933:1083009..1083067Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1082537..1082757TCONS_00055557-exon-scaffold_253-1510915933:1082537..1082757Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1080596..1080644TCONS_00055557-exon-scaffold_253-1510915933:1080596..1080644Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1510915933:1079854..1080304TCONS_00055557-exon-scaffold_253-1510915933:1079854..1080304Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1085108..1085228TCONS_00055557-exon-scaffold_253-1491911889:1085108..1085228Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1084315..1084469TCONS_00055557-exon-scaffold_253-1491911889:1084315..1084469Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1084036..1084110TCONS_00055557-exon-scaffold_253-1491911889:1084036..1084110Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1083686..1083758TCONS_00055557-exon-scaffold_253-1491911889:1083686..1083758Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1083402..1083422TCONS_00055557-exon-scaffold_253-1491911889:1083402..1083422Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1083009..1083067TCONS_00055557-exon-scaffold_253-1491911889:1083009..1083067Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1082537..1082757TCONS_00055557-exon-scaffold_253-1491911889:1082537..1082757Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1080596..1080644TCONS_00055557-exon-scaffold_253-1491911889:1080596..1080644Clytia hemisphaericaexon
TCONS_00055557-exon-scaffold_253-1491911889:1079854..1080304TCONS_00055557-exon-scaffold_253-1491911889:1079854..1080304Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055557-proteinTCONS_00055557-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:1079854..1085228 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.42847	3.76324	5.6858	5.29992	19.0247	14.5372	10.8446	14.3731	9.25057	11.2142	13.5594	9.85461	13.2403	13.9761	11.4349	11.8922	14.1391	13.9451	14.842	10.0729	15.8448	16.4489	11.7733	16.4165	10.2659	14.3469	17.5187	21.6298	22.5165	21.073
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR007797TF_AF4/FMR2
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055557 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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