TCONS_00055546 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055546
Unique NameTCONS_00055546
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3780

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055546 ID=TCONS_00055546|Name=TCONS_00055546|organism=Clytia hemisphaerica|type=transcript|length=3780bp
TTTTGagtgaaaattgcaaaatattatttttacctATTTTTGTGACCAAA
ATTCTTGCTTTTATATGCTGATAATGCAAAAGCTTGAATATCACTTTTTC
TATTAGGTTACACGCTCTAAATATATAAATTGGTTGCCCAGAAATATATT
CGTGTTTAACGCGCGTTTAAAACGCAACAAGCAACGCAATAGACTATGGG
GAAAGCTCTCACTTTCACGGTATTATTTCTTCTCTATGCAGGATTGAAAA
TCGAAGGAAGATCTGTCAAGTATGGAAACTTCCAGTTCCAGGAGAACAGA
TTGGACGTCTTTTCATACCATGGTGTCATTGAGAATGGTATCCAAGGCAC
CACTGACAATGTCACCAAACTTAAAATTAACGCCCGTGTAGAAATTGcta
attcgcaaaattttcagtttgtacTCAAGCTATCCGATGTCAAGTTTTTT
GAATCGCTTGGTAGTGACAGCAACTACATTGAGCTTCCCAAAAATGATTT
TGCATTACGCTTGGAAAAACAtagtttgaaatttgaaatgggTAACGGAG
GTATCAAAAAGATAACACCGTCAACAAGGTCAACACAATCTGACGTATTG
AATGTTCAACGTGGTATTCTGAGTATGCTTCAAGTTCGTCAAGTAAACGA
AAAGAATCCCGAGGATCTTCGCATCGAGGATGATGTTTCTGGTTCTTGTG
AAACCGCCTACATCCATGTCACTAAACCAGACCAAAAGAATAAGTACAAC
TTGATCGAGAAAGTTAAAGACCTATCTACATGTGCAGATCATCACAACAT
TCGATCAACGATCGATGGGAACTCTTACAGTAATGATGGTGAAGATGAAT
CGAAAGGCTCAGTTTATGATTCCGAATTCAAATGTATGTACAAATTCAAC
CTTGATGGAAGTGGTTTACATAAAGTCCATTGCAAGGAGAAATTCTTAGC
ACGAGCTTTTTCTTCTAACCAAGCTGGTGCTTATGTATTTACAAGCACCA
AAATGAAAAGGATATCTTCAACTGAACTATCAACAATAACATCGCCATAC
ACAGATTTTTATACCACCTCTATCAAATTCGATCACTCGCCACCAGTTGA
TAAAACGACCAGTGGTTCAAATTACCGCCAGAAAACAATCAATCTTCTCA
ACGAGCTAGCTACTGATGAATTCTATGAAAGTAAACCGAATTCGGCTGAA
CGATTCTTTGAGTTGGTGATTTCTTTCCGACATTTAAAGATTGCTGACAT
CAACACTATCATCGGTTCAGTGGATTTAAGAAAAGAAGAAGTAAGAACAT
TTCTGTTCGATGCGTTGGCTCAATGTGGTACTGCAACATGTTTACAAGTC
TTGTTCAAAACAATGGATCAATCTGGTATGGAAAAAGAAGCCATGAAGTT
TCTTCCTTTCCTCGCGTTCATCAAAGATCCCAACCCAGAAGTTATTGGCC
TGCTCAATGGTTTGCACCAGAAGACTCAGCATCCATCCCTGATATTGTTG
ATTACAACACTGAGTTATCGCATGTGCAAAAATCATCAAGGAAGCTGTGC
TGATACTGGTCGTATTGGTCAAACGATGAAAGACACAGAAAATTCTCTTC
TTTCAATGCTTGGGAATGATTGTCAAACCTCAAATCCGATGGATCAACAT
AAGATTCTATACGCTTTAAAAGGTATTGGAAACCTTGGTCAACCTGCTAA
AGCAATCCCATTGATCATGGACTGTGTACAGAATGCTAAACATGTCAATA
TGTCAATTGCTGCTATCCAAGCTATGAGAAAGATGTCTTTATCCACAGAT
GTCCAGTACGAACTGATGGAGATGTTAGCTGACCAAAACAGCGATTTGGA
GAAACGTCTGCAAGTTTTTCTTCTATTGATGTCAAGACCTTCCAAAGAAC
ATGTCATTCTTGCCAGAGATATTGCCAATGATGAGAAAGATTCAACACAA
CTTCGTTCATTCATGAACTCGTATTTGAGAAGTGTTGTCGGCAACAAAGC
ACCTGCTCATATCAGGATATCCAAATTGATCAAGGAAGTTTTAGAAGAAT
ATCCATTAGACGACTTCGATCCTTCACCATCACGGTATTCAAAAGCTTTC
CTCCATTCCGCAAGTTTNACTTCGATCCTTCACCATCACGATATTCAAAA
GCTTTCCTCCATTCCGCAAGTTTCATGAATATGGCAGCTACCGTGAACGG
AATGGCGTTCTTTCATCCGGAGAGTTTCGTACCACGCTCATTCAGCTTGA
ATATGACAACACATTTATTCGGCTTCTCTGTCAATGCTTTCGAAGTCAAC
GCAAGAATGGAAGGCTTAGAACGTTTGATTGGAAAATACATGAATAATGA
TGGTTATTTTAGTTCTAACTACTTGAAAAAAGTGTTCCAGATACCAACAC
GACAAAGACGGAGCACAGAAACAGATGATTATAAGACGATCGATGAGCAA
GTCAATATGAAGCAATCTTCACCACAAGCCTTGGTTTCTTTCAATATGTT
TGGCAATGAGATCCAAGCGCTGACTTTGGATGATTTACCGTTTTTGAATG
GCAAGATGGATAATGTGAATATCATCCACGATCTTTATGAGATGACTAAA
GGTAAAAGGAAAGTGTTGAAGCATAACATGTTAGTAATGGAAATTTCACA
CATGGTACCCACAATGCTCGGTATGCCCATGAAAATTGCTTTGAATGGAT
CAGCTGTCATTACTGTTGATATGAATGGAAAAGTGGACACCAAAAACCTC
ATTTTCGGTCCCAAAGCTGTTACCATCAGTGGAAATTTGAAACCAAGTGT
TTCACTTCATGCGTCTGGTAAGTTAAGCGTCGAATGTTATGGAGTGAGTG
AGATTGGAACATCTTTTCTTGGTAACGTTCATTTTGGAAAGAATTTTCAA
GGGAAAGTACATTACGAAGAAGGAAAAGAAATCATCTCGGAACTAAAAGC
CGATGATCAGATTACAGACCTCCTGAATATCAGTTACAATATTTTCCACG
AGAGCAGCTTAAAAAAGGAACAGGTTCGAGGCATTGAAAAACGTGCAAAG
GGCTACTTGTGCAGTAACAACATTTTCGACACCACTTCATTCATGGGTTG
TGATATCTGCATCCAAGCTAGTTTCCCGAATGCTTTTTACAACGGAACAG
CTCCGTATTTCCCACTGACCGGTCCATTCAGCGTTGGTGTCCGGAACTAC
CCGAAAGATCCGAAACTTACCAAATACGTCCTACACATCAAGAAGGAGGA
CAGGATTTATACAGTTTCGATTGGAACACCGGGTGCAACATTGGAAAGAA
AATATTCGTTGAGTGTAGGATTGACCAGAAATAACGAGGGTGGTCTTGTT
GGTTTCACTATTGGTGAAAATAGACGTGGTGTCTTGTTTGATTACGTGTA
CGACGAGGAGACAAACGAAGTCCGTTCAACCTTATCATCCAATTTCACAA
AACCACCAATCAAATTGTACACAGAATTCATCAACCGGACAGACCCGACA
ACACTCAATCGACACGTGGGCACCAGATGGCGATTCACACATGACAAAGT
TCACATTCAGCATGAtttgttttataaaaacactTATGAGTACTGGGCTC
TAGGATCAAAACTTGAATACGCAAAAGGGCAAACAGCTAGTATCGATTTA
AAGATACAATATGAACCACAAGTCTTCGATTTGGTTATATCTCATCCATC
AACTGATACCAAACTCCTCGCCAAAGGAAAACCAATGTTACCAAAGCTTG
AAGGAGAATTGAACGTAACACATGCTGGAC
Run BLAST on NCBI

transcript from alignment at scaffold_253:941392..956391-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055546 ID=TCONS_00055546|Name=TCONS_00055546|organism=Clytia hemisphaerica|type=transcript|length=15000bp|location=Sequence derived from alignment at scaffold_253:941392..956391- (Clytia hemisphaerica)
TTTTGAGTGAAAATTGCAAAATATTATTTTTACCTATTTTTGTGACCAAA
ATTCTTGCTTTTATATGCTGATAATGCAAAAGCTTGAATATCACTTTTTC
TATTAGGTTACACGCTCTAAATATATAAATTGGTTGCCCAGAAATATATT
CGTGTTTAACGCGCGTTTAAAACGCAACAAGCAACGCAATAGACTATGGG
GAAAGCTCTCACTTTCACGGTATTATTTCTTCTCTATGCAGGTAAGAAAA
TGTCTTTGGTAACCTATCTTTTTAAATAAAACTACACACCTCCTCTTCTC
ACAGACCCATTGGGAACCCTTCCCACGGGAAAAATTGGCCGAAATATCGT
CGCCAGTGGAAAATTATACTCTAGTTTTTGTCCCCGCTTAAATTGATCAG
ATCAGCAAATCCTCACTGCAAAATATTGTGCTATTTTTTCATCTCCACTG
AATTTCCAGGCTAGAAAACAATCGAATTAAAATTCCCCAGGAGTTTTGGT
CCGTTATTTTTATCCCCACTGGCTGATCAAATCCCACCGGGTCTGTCAGA
GGAAGGTGTAACTACGTCTGGAATGCACATCGCAACCCCACTAGGGTGGT
TGGGCTTTTATATTAATGGGTACAACTCAAGGGAACTAAACTGCCGAAAA
TCTTCATACCCAAAATTTTAATTGATAGAAATCGAAGCATGGAGATTCAA
GCAAGACTTGCACCTTCATAAGGAGTTCATATTGTTGTTGATAGTTTCTC
TCTGCGATTGATCGATTTACAGGTGGTTTGAGCGTTGGATTTTCACCAAA
GATAAACATTATTGTATAAACTTTTCTTTTTACATTTTAGGATTGAAAAT
CGAAGGAAGATCTGTCAAGTATGGTATGTCTTTTTCCTTAAATTTCTTCT
AAACGTACCTGGTTTGGGGGCCTGGTTTGTACCATTTCAACTCCAACCAT
ATTATTTTAAGTTTACAATAGATTACCATGAAGGTAATAAAGATATAGAT
GGAGAGAAAACGTCTCGGTAATGACCTAAAGATCGTTGAAATCTTTTATA
AATCTATTCAAAGCGGCTTTTTTTTGATGTACCATCATTGGAAGCAAAAA
AATCCGAAATGTAAATTTATAAGAACAGAAGTGAGANNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTCATATCGATGTATTTTTGGGCGAACACTGTGCTAAT
TTTGAGAGTTTTAGCACATTTTCCTTGAAAATTTCTTCATTAAAAATCTT
TACGTCTAAAAGGGAGGGGAATTTCAAATTCTGATGGATGATTAATTAAA
AGGTTACCTAATCGTAATATAGAATTCTTTTTGAAATTTATCGATGATTT
TATGAGAGGGGACCCTTAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCTCACAATAGAGTTGTTAAAAATCCAACATAT
TTTTATTCAGTTTTTTATGAACTTAAATATCCCCACGAGTATACCCAAAA
TTAATCATCTTATTCCTAAAGCAACCAAACAGCTGCTTGCTTCCGATGAT
AAATCAGAATAGAACAAAAGGCATTGACTCTCCATCTATCTTTTTCATAC
CTTCATGAGATTACTAAAGCCAGCCGTCTATTTTATTTTGAAAACAAAAG
ATATAGGCTTTATATCGTGATCCTAACTCTCCAATCGATTTGATTGTTCT
CTTTGAAATACAAGATCGTATTCTTTCAGGAAACTTCCAGTTCCAGGAGA
ACAGATTGGACGTCTTTTCATACCATGGTGTCATTGAGAATGGTATCCAA
GGCACCACTGACAATGTCACCAAACTTAAAATTAACGCCCGTGTAGAAAT
TGCTAATTCGCAAAATTTTCAGTTTGTACTCAAGGTAATATATTAATACG
TCTCCGTGTCAATCCTTTGAGCTTTTTGTCGCTTTTTTATAAGAGTAAAA
GTTGAAAACATCCTATCAACCAAAACCTAAGAACAAATTGAGGACAATCC
CAAATTCAGATTTTAGAATTGGCTAAGTAAATGTTATTTTAAGCACCTCT
GCGAATATTAGATAAATAAAGTAAACATGTTGATTAAATCACAGAACAAT
CGTGCCAGATGTTACTGGTTCTCATGAATAAGTGCATTGAGTTTGTTGCG
TGTTTTTCACACCAATTATTATTTCCCATCATCTATCCGTTTTCTTAGCC
ATACTAAATTTGATCTTGGGCTAAGGGTTTCTCTTTAACTGGGTCATTAT
AATACCAATGTTCTAAAAAGGTTCTAAAATGATTTATCTGATGAGAAAAT
CAAACAAACGATATTTCACGGAATTTTCACTCTATATAAAATTTTACCAT
GATATTGGTAAATATGTTTCGACATCAGAGGTCATATGATTTTCTCTTGT
GATACAAAATGATAGAAATGCTATTCTAGGTGAATTTACACAAATTTGAG
TATTTAGTAGACACAAATAAACCTGTAACAATACACGTAGGCTGATGTAA
ACAACATACTTAGTTGTCCCAATAGCGATTAATTTTAAATTTTTCGAAGA
AATGATCTTCAACAACAGATTTCAAATTTCGAAATTGTTTACTACACTTT
TAAGAAGTGTGGGAACGACTTTGGTTGCAAAATCCAGCCTTTCTTTATTT
AAAATAAAACTCCGACCCATTCTTCTAAAGTCTAAAATAAGAAGAATAAA
CCAGACAAAAAAACATTGTCCGTACTTTCAGTGACTTTTTATGATAATAA
TGACACCCTTCTTTATTTGGTGAATCTGGCCTGGGTACTAGATTAAGATT
CCTTTAACACTGGTATTTATGCAAGACCATGAAAAATTCTTCCATCACTT
CAAGATGAATATGAAGCTGTTAACCCTTCTTGTGGCTTTACTGCCATTAC
TAGTGGCAACAAACGACACAACTCAAATGAAAGCACAAATCCAAGCCTTG
ACAACATTGGTTAGTCAACAAGGACAACTGATTCAAAAGCTTGTGAAGAA
AGACAGAACAAGGGATGGATATTGTCAATTCAAAGTGAATCCATGTGGTG
ATTGTATGTGTTTTGAAGATTTGAGGATGGTTGAGAAATACTACTGTGAT
TGTCGTGAAAAACCAATTCGCCGTGATTGCAAGGAGCATTATGATCAAGG
AGAGCGTACCAACGGTATATATCGTATCAACAAAAACCTCAAGATTCTCA
TGATTCAAGTTTTCTGTGATCAAACAACTGATGGTGGAGGCTGGACTGTT
GTTCAGCGCCGTGTCGATGGCTCAGATAATTTCCTTCGAAACTGGGCAGA
ATACAGAGTAGGATTTGGGCTTCTCCACAGGGAGCATTTTCTCGGAAACC
GTAACATTTATCTGCTGACAGCCCAAGCTTACTGGAAAGGATCGGAACTC
CGTGTTGATATGGTATCAAAAGGTTCTTCATCTAGACTGTGGGCCAAATA
TTCAAGCTTCGAGGTTAATAACGAGGCTAGTGGATTTGAGCTTCACGTGT
CAGGCTACAGTGGGAATGCATTAGATCGTTTGACGTACCAACACGGCATG
AAATTCACCACATATGATAAGGAGCATGATAATTGGTCTGGCGGCAACTG
TGCTATTCGTAATGCAGGAGGCTGGTGGTATGACGATTGTGCGACTGCAA
ATTTGAATGGAAATTACGACCAGTTCCAATCCATTGCACAATCGTGTTCT
TCTGATTGCAGTTCTGTATTTTGGCAACCTTATCATTTGAAATATTCTGA
GATGAAAATCCGACGGGTTTAATCATCAACTACACCAAAAACGGATGACA
TTTGGTTATAATTAACATTACTTTTATTTTATTTGGCAACGCGGTGGTGT
TTTATTGGGTAGATATTTGAAATTTCAAAATATGTATTTCATTAGCTATT
TCATTAGCTATTTCATTGGCTATATATTTTATAGGGAAAGTATGAACTTA
AAGAGGAAGAACATTTAAAATGTGTATCTTTTTTGTAATTTCTTTTTATA
GCCTTTAGTTTGGCGACGCAGTTTACACGTTACTTGAAAATACTTCATAG
CGTTACGAACCAAGAATTTTTTTTCATAGGAATCAGCACAAAGCTCAAGT
TTTTTAAAGAATACTGAGTTTACTTTTTCTTCGGTTAAAATTTTTCAATT
TTTCGGTTTGTTATATTTCTACCTCTTTCATTCCAAACTCCACTTTATCA
CATGTTTGATAGACAATACTGCGAGAGAAGATATATTTGACACAAGCAAG
AAACTTACATTGGTCATTGTTGAAAGAAATTTCCTTCCTCTTCGTTAAAA
ATTTAAGAACCACTAAGAAAAGACTCAAAATGTTCAAAATATTTTGAGAA
TCACTCGATCAATGTAATTCTTATATAAAAAAACTGTGTGCATGTAAAGC
CCCCTCAGTTTCAGTAGAACATTTTGTAAGTGAATACTGAAAGAAAAAAT
ACCCTTCGTCTCTTGCAGCTATCCGATGTCAAGTTTTTTGAATCGCTTGG
TAGTGACAGCAACTACATTGAGCTTCCCAAAAATGATTTTGCATTACGCT
TGGAAAAACATAGTTTGAAATTTGAAATGGGTAACGGAGGTATCAAAAAG
ATAACACCGTCAACAAGGTCAACACAATCTGACGTATTGAATGTTCAACG
TGGTATTCTGAGTATGCTTCAAGTTCGTCAAGTAAACGAAAAGAATCCCG
AGGATCTTCGCATCGAGGTATAAAAATTTTAAGCAAATTCGAACCCAGTT
CCTTTGTTCACTTTTTTTTAAATTCTGATAGCGCTCGTGAAATTGTATCA
CGCAAGTGGGTCTGGGTACAAGATTTTTAAGAGAGTTTACTATAAACCAG
TGCGCTCAAGGCTCAGTTCTTTAAATGATGTTCAGTGTCTCACATGGACT
AATCGGAAAGTTAGGGGGTTTTGTGACTCACTTTTTCCCGTGAAAACTAC
ATTGAAAACATTCAGTTATGTTTTTGCTTAGTTCTTTCGAAATCTGTGAT
TCAACGAATTTGTCACCTACTTGGTCCATCATGTCAATTTACTCCAATGT
TTTGCCCATGAATGTATATGAACTGGCCTATGTGTTAATTTCTTTAAGCA
AGAGAATTCCATAATGGAAGCTCTTTTTGTTTTGCTTACAAGACAACTTC
ATTTTTCTAAACATTATTCATCCATAGGATGATGTTTCTGGTTCTTGTGA
AACCGCCTACATCCATGTCACTAAACCAGACCAAAAGAATAAGTACAACT
TGATCGAGAAAGTTAAAGACCTATCTACATGTGCAGATCATCACAACATT
CGATCAACGATCGATGGGAACTCTTACAGTAATGATGGTGAAGATGAATC
GAAAGTAAGACTTTACGTATCAAAATATATACCGTATTTCTTCGAATAAA
CGTCCCGGGTGTTTATTAAATTTTTTTGATTTTTAGGAGGGGCGTTTAAA
AGAGGGGGCGTTTATTAAATAATACGGTATTGTGATTTCTATCCTTTTTT
TTCGTGATAGGCTTAAATGACGAGATCTTAACATACAGTTGACTCTTTCT
AATTCGATCTTCTGGGAACCAAAAGTTTTCTTCGAATGAAAGAAAGATTC
GCTTACTGATTTCTTTTGCTGGTTCCCAGTCCCTGGAGGCCTTCAGTGAC
TCATTCAGTTTAGGACATGTTTTTTTTTGACTGTACCAAAATGCCGATTT
TCAACCAACCCGGTTCAAATTGGCACTAACAGAGACAGCTGAACCCTTTC
TTATCGTTATTCAAAAATAAGAAAATAGATTAGTAGCTCTGTCCGATACT
TTTTGTCCGATCTTAATAGCTTTTATGGAACTTAAGATATCGCTTGTTGA
ATCCGGAGTATTTCAGGGATGAAAAAAATCATAGTCTATTTCGGATTTAT
AAAGTCGGCTCTATATTTGGCCTTTGTTGTGTCCAATTTATATAAGAAAC
TTATATGAGGGTGTAGCTAAAGGATTAAATTTTCACATCGACCTCTTTTT
TTTGGAAAAAAACGGAGGAAAATGGGATCAAATTGATCATTTTTGAAATC
TAGGTGCTAATTCTAATTGTATATATTTTCCTGACGAGTCTATCTATCGG
GAAAGTGATTTGAGATTTTTGTTTAGTTGATAAGAAAGGAACGAACTAAA
GAAAACGGGAATTGTTAAAATGAGTGAAAAATGATTAAAAAAGTCTTGAT
CATAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAATGCA
TAGAAACCTCCTCAGGACCGAATAATGAGTCATGGAGTGAGATATGATCC
AAAACACTCCATGATTAATTAATCCTGAAATACTCCGAATTTTGAAAATT
CAAATAGCTCATTTTAAAGCCCTTCCCAAATTTCAATACATATCAAAATT
TTGGGAAAATTCATCATGCGAATGACGAGATAATTAAAATAAAGTGATTT
TCACGATTTTCGAAAACCTGATTTTGGTACAGTCAAAAAAAAACATGTCC
TTTAAAGGTGCTAGAAATGAAACATCTGGATTGAAATTCTTATATCCCAT
CCCAAACGCGTGTCCCGTGTCCTTTCCGTACCGGATTGAAAGTAAAATAT
GTGCCATGTACTCGAACTTCTTTTTGCTTGGTAAAGATTGCACCCCCCCC
CCCGGGGGGGGGGGGGGGAATTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCGGGGGGGGGGGAGGACATT
CAATATACGTGTGGCCCTTAAATGTACTTTCCCAAAGTGCACTATAAGGT
TCGAAGTGATCAAAGATGAGAAAAAATGTACTCTTAGGGTGAAAACTTTT
GCCTAAATATTTTGCCTAATATTTTACCTAAAATGGTCAAATATTTTCAA
GAAGATTTTCTCTGTTTTGTAAGGGTCCGATTTCCGTTTCTATCAATTTA
TAGGGCTCAGTTTATGATTCCGAATTCAAATGTATGTACAAATTCAACCT
TGATGGAAGTGGTTTACATAAAGTCCATTGCAAGGAGAAATTCTTAGCAC
GAGCTTTTTCTTCTAACCAAGCTGGTGCTTATGTATTTACAAGGTAATAT
ATTTTTAACATGGATGACATTCTTTTAACGTAAAACTCTCCTTAAAAGCA
TTGGTCTTACTCATATATGAATACATATTGATAGCAGCAACATTTTAGAC
TCTACAAGTTCTTTGTCAAGTATTTTCTCCGAGTTGGAAGATTATCAATC
TCGTACCCAGATCCTTTTGCACCACTTTTTGATTTTACTGACTGATGGTC
ATGTTACATATATATCTTTCGTGAGCTCTATTAGATTCATAAGAAAGTGA
ACACAGGAACTGGATTCGAGTTTGAAAGGCTATTTATCGTCCGATATTTT
TTTCCCGTAGCACCAAAATGAAAAGGATATCTTCAACTGAACTATCAACA
ATAACATCGCCATACACAGGTAAATTTGTAAATTGTAAATTGTAAATTGA
ATTTATACTGAAACAACAAAGAATAATCCATACCTTTTGTCAAAATTCTT
ATAAAAATACGCTTTACTTAAGAAGGCTGAAATAATTCACAACATGCAAA
GGAGGCATCCATGAAGGGCCGCTTTAATCAATTAATAAAGGTCAATAATC
TTTCTTGATTTGTTTCAGATTTTTATACCACCTCTATCAAATTCGATCAC
TCGCCACCAGTTGATAAAACGACCAGTGGTTCAAATTACCGCCAGAAAAC
AATCAATCTTCTCAACGAGCTAGCTACTGATGAATTCTATGAAAGTAAAC
CGAATTCGGCTGAACGATTCTTTGAGTTGGTGATTTCTTTCCGACATTTA
AAGATTGCTGACATCAACACTATCATCGGTTCAGTGGATTTAAGAAAAGA
AGAAGTAAGGTAAGAACACCCCTGTATCTGTGGTTCGTACAAATTCTTAG
ACCAGTGGGATATAACAGGGGTGGTGAATGCCAAAAGGGAATAGAAAGTA
TTCTGGTTTCCATGGATGCTGATGAGGCTGAAATTCCTGAATTCAAATGG
CTTGCTTTGAGTTCCGTATGGCCAATATTTCGAACTTTGGCTAAACTAAA
TCTTTTATCGACTAAGTGTTTACATCTTCTTTCCAGAACATTTCTGTTCG
ATGCGTTGGCTCAATGTGGTACTGCAACATGTTTACAAGTCTTGTTCAAA
ACAATGGATCAATCTGGTATGGAAAAAGAAGCCATGAAGTTTCTTCCTTT
CCTCGCGTTCATCAAAGATCCCAACCCAGAAGTTATTGGCCTGCTCAATG
TAAGACTAAATTTTCAGAAGAATTGTGAAGATTCAAATTATAGTCTCTGA
AAATCACTAAATGAATGATATTCCTAGACTGAAGCAGAATTTGTGACAAC
AGTTTTATGCGATTTGGTAACGATAAATAGTGCCAGCTTTGTGGTTGTGA
ATTAATTACACCGAACTCAAACTCGAAACCAGTCTTAGTTCACTTTTTTA
TGATTCTGATAGCACTCGCGATTGTATCAAGTGCATCAGCAAAATAAAAT
TGTGCGAGTTGCCTAGGAACGAGATTGCACCAAAGTTGGTCGCGTTGGTC
GGAACAACAGATAGCTATTATTTTCACCCTTCAATTTTTATTTCTGTTAT
GTATATGTTGTTAGGGTTTGCACCAGAAGACTCAGCATCCATCCCTGATA
TTGTTGATTACAACACTGAGTTATCGCATGTGCAAAAATCATCAAGGAAG
CTGTGCTGATGTAAGTTAAATTTGTGTGATAAATTTCGAACTACTTTTCC
TACCAGTCAAAGAATAATAAACTATCACAAACCAGTTTGAACCCTCTACT
ACACAGGTAAAATTGTAGAAGACACCCTGCAATATTGCTCTCATACCACT
CACCTACCTCTTCTCGAGCTGCAATCTGTAAAATCTAAAACAAACCTCGA
TTGTTTATCCTTCTTCATAGACTGGTCGTATTGGTCAAACGATGAAAGAC
ACAGAAAATTCTCTTCTTTCAATGCTTGGGAATGATTGTCAAACCTCAAA
TCCGATGGATCAACATAAGATTCTATACGCTTTAAAAGGTATTGGAAACC
TTGGTCAACCTGCTAAAGCAATCCCATTGATCATGGACTGTGTACAGAAT
GCTAAACATGTCAATATGTCAATTGCTGCTATCCAAGCTATGAGAAAGAT
GTCTTTATCCACAGATGTCCAGTACGAACTGATGGAGATGTTAGCTGACC
AAAACAGCGATTTGGAGAAACGTCTGCAAGTTTTTCTTCTATTGATGTCA
AGACCTTCCAAAGAACATGTCATTCTTGCCAGAGATATTGCCAATGATGA
GAAAGATTCAACACAACTTCGTTCATTCATGAACTCGTATTTGAGAAGTG
TTGTCGGCAACAAAGCACCTGCTCATATCAGGTAAGGTAGATCTGTCTAA
TAATTTTTGTATTGATATCTTAAACCTGAAAATCGAATCGTTTGAATATG
AAAGAAAAAGATACGTACACTAAAACTTCGGTCAAACTCGACGCTTTTTT
ATCATACAATCATGTCAATGAGGTCATACAATTTCTACTTTCAGGATATC
CAAATTGATCAAGGAAGTTTTAGAAGAATATCCATTAGACGACTTCGATC
CTTCACCATCACGGTATTCAAAAGCTTTCCTCCATTCCGCAAGTTTNACT
TCGATCCTTCACCATCACGATATTCAAAAGCTTTCCTCCATTCCGCAAGT
TTCAGTAAGTACAAATGTTTACTTTAGATTTGGATACAAACGGTTTGAAT
TTGTTTCGTCTTGCTAGTCTTTTCCAAAAGATCTTTTTATTTTGTTGGAC
CTACCGGGAGGTCCTTTAATTTGACCGTTGTCCGTTCGTCTGTTACAAGC
TTTTCTCGGGATTGGCTCATTAGTTTTTTTTTATTTTTTGCACACTGCCT
GAAAAGTGACGGAGCCCGATTTTTGAAAAGAAATTTTGGGGGGCGAATTT
GGGCAAAAAACTACCTAAAAATAAGGTTTTTTGGACTTTGTGCAAAATTG
CTTCAGTAGTTTTTGGCAGAAAGATAGAGTGCAAGGTACCCTAAAATGTG
GCTGAAGTTAGTTTTCTCGGAAAATTTTTTTTGGCCGTAAAAATCGGTTT
TTCTTATTTGGGGAAATTCCCTTATGTCATTTTTAGGGAAAAAGAGCGTT
TCTGGCGATTGGATCGATATTTTTTTCTGATTTTTTGTACTGATGTAATA
TGGTAATATTTAAAATCTGATGAAGTCCGATTTTCAAAAAATATTTTTTT
GGGGCAAATTTGGGCCAAAATGTGCCTAAAAATGGGATTTTCTGGACTTT
GTGTGAAATTGCTTCATTAGTTTTTTCAAATTTTTTGGACAAAGATAAAA
GGCAAGGTTCTCTAAAACACGACTGAAGCCTTTTTTTCCAGGAAATTTTC
TTTGGCCGTAAAACTCGGATTTTCTTATTTGGGGAAATTCCCTTATGTCA
TTTTTAGGGAAAAAGAACATTTCTCGCGATTGGATCGATATTCTTTTCTG
ATTTTTTGCACTTTGATGTTAAATGGTAATCTTTGAAATCTGATGAAACC
CGATTTTCAAAAAAAAATTTTTTGGGGCAAATTTGGGCCAAAATGTGCCT
AAAAATGGGATTTTCTGGACTTTGTGTGAAATTGCTTCATTAGTTTTTTC
AATTTTTTGGACAAAGATAAAAGGCAAGTATCTCTGAAATGTAACTCAAG
CTGTTTTTTCCGGAAAAAATTTCTTGGCCGTAAAAATAGAATTTTCTTAT
TTGGGGAAACTCCCTTTTGTCATATTTAGGGAAAATGAGCATTTCTCGAG
ATTGGCTTGGTGTTTTTTTCTTATTTTTTGCATAGTGCTATANNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTG
CATAGTGCTATAAAATGGTAATATTTAATTTCTGATGGAGCCTGATTTTC
GAAAAAATAATTTTTTGAGCAAATTTGGGCAGAAAAGTGCCTATATTAAA
GCTGCTCATTACACTTTCTTACTCTCTTGCTATTTGTCCTATTTTTATCT
GATTTTGATCACCAGGTAGGTCCATTCAGCATGTTGCTTGTTAATCTTAA
AAGTATCTTTAAATTGCTTCAAAAATTTTTATATCATCATTGTGTTCCAT
AGTGAATATGGCAGCTACCGTGAACGGAATGGCGTTCTTTCATCCGGAGA
GTTTCGTACCACGCTCATTCAGCTTGAATATGACAACACATTTATTCGGC
TTCTCTGTCAATGCTTTCGAAGTCAACGCAAGAATGGAAGGCTTAGAACG
TTTGATTGGAAAATACATGAATAATGATGGTTATTTTAGTTCTAACTACT
TGAAAAAAGTGTTCCAGATACCAACACGACAAAGACGGAGCACAGAAACA
GATGATTATAAGACGATCGATGAGCAAGTCAATATGAAGCAATCTTCACC
ACAAGCCTTGGTTTCTTTCAATATGTTTGGCAATGAGATCCAAGCGCTGA
CTTTGGATGATTTACCGTTTTTGAATGGCAAGATGGATAATGTGAATATC
ATCCACGATCTTTATGAGATGACTAAAGGTGCGTCTTGTTATTCCACTCT
ACTTTGTCTTTACAAGGATGTCATACTTTCGATCAGAATACTTTTAATCA
GAATACTGTATTTGCTGTCAGCATGCTTTTGCCGAGTGTAAATGATTCTC
GACGACTTTTGAAGTTCAGTAAAATTTGTATATAGTGTACACTCGCTATT
CCGAGCTTCTATTTTTCGGATGTCTCTGTAATTAAAACCAATCAGATTTC
CTGTTCAATTTTTTTAGAATTTTTAAGGAACTTTTCCTGGTCGGAGCTTG
GAATATTAAGATTTGATATTGAAGACCAATTACTAAACCCATTCCCATTT
AAGTGTACAAACTTTTTTCCTAGCATGTGAATGAAAACCATTCGAAAGAG
ATATCACCTTAAAACATGTATAATCTAATTGCTTTTGTATGGTTTTGACA
CGGTAGCCAAAAAAGTGCACACTCAAAGTAAATGTACTTAACCATGTTTC
TTCTTCATTTTCAATATCTCAGGTAAAAGGAAAGTGTTGAAGCATAACAT
GTTAGTAATGGAAATTTCACACATGGTACCCACAATGCTCGGTATGCCCA
TGAAAATTGCTTTGAATGGATCAGCTGTCATTACTGTTGATATGAATGGA
AAAGTGGACACCAAAAACCTCATTTTCGGTCCCAAAGCTGTTACCATCAG
TGGAAATTTGAAACCAAGGTAACGAGATTTTAACCATTTCTTGTCTGTTG
GTTTATTTGAAAAATCTTTTAGCTCTATGGACGAACCCTTCATGTAAATA
TCGAGTAGTTTATATCGCTGCAATGCTTCTCGCGTAGATATTGGACTAGA
TCTTAGAGAAAATTTGTGCTATAATTGACAAAACTGTCAAGTATTTCTCA
ATTTTTCATCGTGACCCTTTTCTGACAATTTCAACCTTATTCCATAGTGT
TTCACTTCATGCGTCTGGTAAGTTAAGCGTCGAATGTTATGGAGTGAGTG
AGATTGGAACATCTTTTCTTGGTAACGTTCATTTTGGAAAGAATTTTCAA
GGGAAAGTACATTACGAAGAAGGAAAAGAAATCATCTCGGAACTAAAAGC
CGATGATCAGATTACAGACCTCCTGAATATCAGGTAAAAAGATAAATAAC
CATTTTTCAGAACGACGAGGTATTATTTTCTATTATACCTCCTCTTCTGT
AAGAGCCATTGTGTGGGCTGCCAATTTTTTTTGGAACAGATTTTAGCAGG
CAGTCTAACTTTTGCACAATAGACAAACTTTATAATCGGTTGAAGAGTCT
TCTCTGCTCTTCAAATTTATTGAAAAGAGCTTCACTTTATATGTCAACAT
GGTTCGATCGCATTAAAATACCTCTCATTTTTAGTTACAATATTTTCCAC
GAGAGCAGCTTAAAAAAGGAACAGGTTCGAGGCATTGAAAAACGTGCAAA
GGTAAACTTATTCAATTTTCTTTCAAAATGTTTTCTGTCTTCAAAATAAC
TTTCAAAGTGATATTAAAGGGGTTTTTTTAATAAGAGTGATATCGTTTGC
TTACTCATAAATTTTAATTCACAAGCTTTTACACATCGGATTGACACGAA
TGTGGAGCAAGATTGGTCAGAAAGAGAAAAAGAAAAACGTTTTTTGCTTA
TATCAACATGATATAACAATAGGTAGACACTTTCCTGGCATGAAATATGT
GTCTGGTATGAAACAGGAACACTAATGTAAAAATAAAGCCTTTAATATTA
GCAGGATATCCTTCCTCTTTATCGAAGCTTAAATATTTCATGACTTCAAC
TTTAGGGCTACTTGTGCAGTAACAACATTTTCGACACCACTTCATTCATG
GGTTGTGATATCTGCATCCAAGCTAGTTTCCCGAATGCTTTTTACAACGG
AACAGCTCCGTATTTCCCACTGACCGGTCCATTCAGCGTTGGTGTCCGGA
ACTACCCGAAAGATCCGAAACTTACCAAATACGTCCTACACATCAAGAAG
GAGGACAGGATTTATACAGTTTCGATTGGAACACCGGGTGCAACATTGGA
AAGAAAATATTCGTTGAGTGTAGGATTGACCAGAAATAACGAGGGTGGTC
TTGTTGGTTTCACTATTGGTGAAAATAGACGTGGTGTCTTGTTTGATTAC
GTGTAAGTTCAATGCATTCAATATTTTAATTTCTTGGTCACATGTTGTTA
GTAGAGCAATATATATTTATCTTAGATCATAAAGTATCAATTATGAGCAA
GATTATGATCGGTCAGAATTGGGTCGTCTAGATAACAGGTATCTATATCT
AATTTGTTACGAAAAGTAACTAAAACTCATCTGCTATAAGTCTAACTCGG
TTCAGCTATTCTTTCGTTGTAACAACATAAAAACAATTCTTAATCCACTA
TCCCGTTTTAATAGTAGCAGCAACAATTCATTTATCCACTCGCTGACTTT
CTTATTCCCTTCAACAGGTACGACGAGGAGACAAACGAAGTCCGTTCAAC
CTTATCATCCAATTTCACAAAACCACCAATCAAATTGTACACAGAATTCA
TCAACCGGACAGACCCGACAACACTCAATCGACACGTGGGCACCAGATGG
CGATTCACACATGACAAAGTTCACATTCAGCATGATTTGTTTTATAAAAA
CACTTATGAGTACTGGGCTCTAGGATCAAAACTTGAATACGCAAAAGGGC
AAACAGCTAGTATCGATTTAAAGATACAATATGAACCACAAGTCTTCGAT
TTGGTTATATCTCATCCATCAACTGATACCAAACTCCTCGCCAAAGGAAA
ACCAATGTTACCAAAGCTTGAAGGAGAATTGAACGTAACACATGCTGGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034934XLOC_034934Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055546-exon-scaffold_253-1575043694:956151..956391TCONS_00055546-exon-scaffold_253-1575043694:956151..956391Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:955519..955551TCONS_00055546-exon-scaffold_253-1575043694:955519..955551Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:954158..954312TCONS_00055546-exon-scaffold_253-1575043694:954158..954312Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:951325..951573TCONS_00055546-exon-scaffold_253-1575043694:951325..951573Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:950688..950864TCONS_00055546-exon-scaffold_253-1575043694:950688..950864Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:948799..948938TCONS_00055546-exon-scaffold_253-1575043694:948799..948938Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:948423..948481TCONS_00055546-exon-scaffold_253-1575043694:948423..948481Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:947983..948223TCONS_00055546-exon-scaffold_253-1575043694:947983..948223Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:947593..947755TCONS_00055546-exon-scaffold_253-1575043694:947593..947755Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:947132..947227TCONS_00055546-exon-scaffold_253-1575043694:947132..947227Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:946461..946921TCONS_00055546-exon-scaffold_253-1575043694:946461..946921Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:946138..946297TCONS_00055546-exon-scaffold_253-1575043694:946138..946297Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:944214..944639TCONS_00055546-exon-scaffold_253-1575043694:944214..944639Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:943524..943719TCONS_00055546-exon-scaffold_253-1575043694:943524..943719Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:943109..943294TCONS_00055546-exon-scaffold_253-1575043694:943109..943294Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:942791..942857TCONS_00055546-exon-scaffold_253-1575043694:942791..942857Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:942090..942436TCONS_00055546-exon-scaffold_253-1575043694:942090..942436Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1575043694:941392..941774TCONS_00055546-exon-scaffold_253-1575043694:941392..941774Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:956151..956391TCONS_00055546-exon-scaffold_253-1510915933:956151..956391Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:955519..955551TCONS_00055546-exon-scaffold_253-1510915933:955519..955551Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:954158..954312TCONS_00055546-exon-scaffold_253-1510915933:954158..954312Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:951325..951573TCONS_00055546-exon-scaffold_253-1510915933:951325..951573Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:950688..950864TCONS_00055546-exon-scaffold_253-1510915933:950688..950864Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:948799..948938TCONS_00055546-exon-scaffold_253-1510915933:948799..948938Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:948423..948481TCONS_00055546-exon-scaffold_253-1510915933:948423..948481Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:947983..948223TCONS_00055546-exon-scaffold_253-1510915933:947983..948223Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:947593..947755TCONS_00055546-exon-scaffold_253-1510915933:947593..947755Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:947132..947227TCONS_00055546-exon-scaffold_253-1510915933:947132..947227Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:946461..946921TCONS_00055546-exon-scaffold_253-1510915933:946461..946921Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:946138..946297TCONS_00055546-exon-scaffold_253-1510915933:946138..946297Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:944214..944639TCONS_00055546-exon-scaffold_253-1510915933:944214..944639Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:943524..943719TCONS_00055546-exon-scaffold_253-1510915933:943524..943719Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:943109..943294TCONS_00055546-exon-scaffold_253-1510915933:943109..943294Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:942791..942857TCONS_00055546-exon-scaffold_253-1510915933:942791..942857Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:942090..942436TCONS_00055546-exon-scaffold_253-1510915933:942090..942436Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1510915933:941392..941774TCONS_00055546-exon-scaffold_253-1510915933:941392..941774Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:956151..956391TCONS_00055546-exon-scaffold_253-1491911889:956151..956391Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:955519..955551TCONS_00055546-exon-scaffold_253-1491911889:955519..955551Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:954158..954312TCONS_00055546-exon-scaffold_253-1491911889:954158..954312Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:951325..951573TCONS_00055546-exon-scaffold_253-1491911889:951325..951573Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:950688..950864TCONS_00055546-exon-scaffold_253-1491911889:950688..950864Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:948799..948938TCONS_00055546-exon-scaffold_253-1491911889:948799..948938Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:948423..948481TCONS_00055546-exon-scaffold_253-1491911889:948423..948481Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:947983..948223TCONS_00055546-exon-scaffold_253-1491911889:947983..948223Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:947593..947755TCONS_00055546-exon-scaffold_253-1491911889:947593..947755Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:947132..947227TCONS_00055546-exon-scaffold_253-1491911889:947132..947227Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:946461..946921TCONS_00055546-exon-scaffold_253-1491911889:946461..946921Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:946138..946297TCONS_00055546-exon-scaffold_253-1491911889:946138..946297Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:944214..944639TCONS_00055546-exon-scaffold_253-1491911889:944214..944639Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:943524..943719TCONS_00055546-exon-scaffold_253-1491911889:943524..943719Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:943109..943294TCONS_00055546-exon-scaffold_253-1491911889:943109..943294Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:942791..942857TCONS_00055546-exon-scaffold_253-1491911889:942791..942857Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:942090..942436TCONS_00055546-exon-scaffold_253-1491911889:942090..942436Clytia hemisphaericaexon
TCONS_00055546-exon-scaffold_253-1491911889:941392..941774TCONS_00055546-exon-scaffold_253-1491911889:941392..941774Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:941392..956391 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0.0209954	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
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BLAST of TCONS_00055546 vs. Swiss-Prot (Human)
Match: APOB (Apolipoprotein B-100 OS=Homo sapiens GN=APOB PE=1 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 1.769e-27
Identity = 147/605 (24.30%), Postives = 257/605 (42.48%), Query Frame = 1 
Query:  283 QFQENRLDVFSYHGVIENGIQGTTDNVTKLKINARVEIANSQNFQFVLKLSDVKFFESLGSDSNYIELPKN-----DFALRLEKHSLKFEMGNGGIKKITPSTRSTQSDVLNVQRGILSMLQVRQVNEKNPEDLRIEDDVSGSCETAYIHVTKPDQKNKYNLIEKVKDLSTCADHHNIRSTIDGNSYSNDGEDESKGSVYDSEFKCMYKFNLDGSGLHKVHCKEKFLARAFSSNQAGAYVFTSTKMKRISSTELSTITSPYTDFYTTSIKFDHSPPVDKTTSGSNYRQKTINLLNELATDEFYESKPNSAERFFELVISFRHLKIADINTIIGSVDLRKEEVRTFLFDALAQCGTATCLQVLFKTMDQSGMEKEAMKFLPFL-AFIKDPNPEVI-GLLNGLHQKTQHPSLILLITTLSYRMCKNHQGSCADTGRIGQTMKDTENSLLSMLGNDCQTSNPMDQHKILYALKGIGNLGQPAKAIPL-----IMDCVQNAK-HVNMSIAAIQAMRKMSLSTDVQYELMEMLADQNSDLEKRLQVFLLLMSRPSKEHVILARDIANDEKDSTQLRSFMNSYLRSVVGNKAPAHIRISKLIKEVLEEYPL 2058
            +F+  R   ++Y     +G+ GT D+ +  +IN +VE+   Q   F+LK S     E  G +     L K      +FA  + ++ LK  +  G    + P  +   + +LN++RGI+S L V    E+  + L + D V G+C T +    K  + N    I   +DL  C     IR+ I   +    G      ++  S   C Y  +     + +  CKE+ L   FS       V   T+  ++  T    I S +  F   + K   +    K+TS     +  +  L EL      E     A  F +LV   R L    + +++  +    E        AL QCG   C   + + + +       +  + +L A I +P+ + +  + N    +    +L      LS+ +   H+ +   T    Q + D  N L+  + +DC      D+      L+ IGN+GQ  + +       I+ CVQ+ K  + +  AAIQA+RKM      Q  L++   D  S  +KRL  +L+LM  PS+  +     I   E++  Q+++F+ S++ +++ ++      + KL+KE L+E  L
Sbjct:   45 RFKHLRKYTYNYEAESSSGVPGTADSRSATRINCKVELEVPQLCSFILKTSQCTLKEVYGFNPEGKALLKKTKNSEEFAAAMSRYELKLAIPEGKQVFLYPE-KDEPTYILNIKRGIISALLVPPETEEAKQVLFL-DTVYGNCSTHF--TVKTRKGNVATEISTERDLGQCDRFKPIRTGISPLALIK-GMTRPLSTLISSSQSCQYTLDAKRKHVAEAICKEQHLFLPFSYKNKYGMVAQVTQTLKLEDT--PKINSRF--FGEGTKKMGLAFESTKSTSPPKQAEAVLKTLQELKKLTISEQNIQRANLFNKLVTELRGLSDEAVTSLLPQL---IEVSSPITLQALVQCGQPQCSTHILQWLKRVHANPLLIDVVTYLVALIPEPSAQQLREIFNMARDQRSRATLY----ALSHAVNNYHKTNPTGT----QELLDIANYLMEQIQDDCTG----DEDYTYLILRVIGNMGQTMEQLTPELKSSILKCVQSTKPSLMIQKAAIQALRKMEPKDKDQEVLLQTFLDDASPGDKRLAAYLMLMRSPSQADINKIVQILPWEQNE-QVKNFVASHIANILNSEELDIQDLKKLVKEALKESQL 624
The following BLAST results are available for this feature:
BLAST of TCONS_00055546 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
APOB1.769e-2724.30Apolipoprotein B-100 OS=Homo sapiens GN=APOB PE=1 ... [more]
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