TCONS_00055531 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055531
Unique NameTCONS_00055531
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2958

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055531 ID=TCONS_00055531|Name=TCONS_00055531|organism=Clytia hemisphaerica|type=transcript|length=2958bp
ccttattttcaaaattaactTAAAAGTCTGTTTATTTTAGATGACATTTA
AAGTAAATTGTTTGATAGATTGTGCATTAGTATATCCCTGATTTGCTGAG
AATTTGATAATAATGCACAGATATGAAACGCTCAAAACACTGGGAGATGG
AACCTATGGTTCTGTCTTACTGGGAAAAGCCCATGACACTGGAGAGCCAG
TAGCAATAAAAAAAATGAAAAGGAAATATTACTCATGGGAGGAATGCATC
AATTTAAGGGAAGTTAagAGTTTACGAAAGTTGAGTCACACCAATTTGAT
CAAGCTGAAAGAAGTCATCAGAGAAAACAACCAATTATTCTTTGTCTTTG
AATATATGAAGGAAAACCTTTACCAACTAATGAAAAATAGGGACAAATTA
TTTCCTGAAACAACAGTGCGGAATATAATGTATCAGATTTTACAAGGATT
AGCATTCATGCATAAAACagGTTATTTCCATCGTGACATGAAGCCAGAAA
ACCTGCTGTGTAGTGGACCAGAAATTGTTAAAATAGCTGATTTTGGTTTA
GTTCGGGAAATCCGTTCAAGACCGCCGTATACTGATTATGTCTCAACAAG
ATGGTATAGAGCTCCCGAAGTTTTGTTACGATCAACCAATTACAACTCTC
CTATTGACATTTTTGCTTTGGGTTGTATCATGGCAGAATTGTATACATTG
CGTCCTTTATTTCCTGGCTCAAGTGAAGTAGAtatgatattcaaaatttg
ttcAGTTCTTGGTACTCCAAACAAGAATGACTGGGAAGAGGGTTATCAAT
TAGCatccaaaatgaacttcaaatttcctaaaatgGTATCGACTCCATTG
AGGCAACTTATACCGAATGCTAGTCAAGATGGTATTGAGATTTTATATGC
AATGTTGGCTTGGAATCCACAACAAAGACCTTCATCACAGAAATCGCTAG
CGCACAAATTTTTCACAGTCGGACAAAATTTACATCGTTCACATAAACAG
AAAGCAAAACCGTTGAAAGCCGAAACAGGGCTAGGTGAAAGAAATAACAC
GAACTTACAAGAGACTGTCAAACCCATCAATTTAAATATGtctttaaaca
aaaatttgaaaaagaacaaTATGGATAATAATGCTAGTGGTGGCAAATTT
GACTTTGAACCCAAGAAACCAGAGGGTCCGAAAAAATCTCAAGAGCCAAG
GAAACGTTGGGGTTCATCCAATATGAATAACAAACAAAATGCTGCCGCTA
CTAAAGATTCAGTTGACGAATTCGATTCTATTCTGGATGGTTTGGGAAGT
AGTACAAATAGCTTCAATAAAAGGCATCCTATCAAGAAAAGGGATACCAT
GGAATCAATAAGTGATAAAGAGAAAGTTTTGGGTGGATTTCAAGCTTTAC
CAAGTATTGGCAGTGGAAAGAAACGAACGACACCAGGTAGCGCTAAGGAG
CATTATCTACAAAAATCACGTTATTACCCTGGAGGTCCAAACGCCCCCAT
TAAACCGAGTATCGAAGGACGAGTCGTGGATGCTGGAAGTGGTCGGAAAT
TTGTCGAATTCACATCCGGTAATGTTCAACCCAACATGAACTCAAGATAC
ATGGGAGATATGGGGCAAGGCACTAAACTACCTACCATCAAGAAGAAAGA
AAGCTCTGATAGATTAGCTGGTGGTGGTGCCATCTGGAAACCTCCTGCAT
TGTCCAACAACAAACAACGATCTTTAGGTCATATCTCGAAACCATCTATG
GCTATTGGAAGAACTAACTGGAGTAATAAGTatggaaaatgaaattatca
aaTTCAACATCTTGGAAGTTTACCTAAAGCTTATAATATTTGGCTTTCTT
GAAACGCCAGACGTGATGGAAAGGAAAGATGATTTAGAGCTCACTAAAGT
ATCATTCGTGTGTCAGGGCGTGACGCCCCTACCATTGGGACGGAATTGCC
GAAAGAAGTTATTTCTTTAAGGAGGAGCTATAAACAACGAGTATTATGAT
GTTCGAGTCAAAGAGATTGTGAagacttttaaaaaatgaattattttttt
tgaaaacgacAAAACTAAAAGTGAAAGACATTAGTCAACAAAGTTGTGCA
TAATATGGTGcatgtatttattttttgtcaaatggGAATCTCGAGGAAGG
ATTCTGTTTTAGTTATACGTTGCATTTAAACCCATGTAACGAGTTTCAGG
AATTTTCGTAGAACATCTTAACAATCTCAGGATAATGTTAGAAAAAGGTT
CTCGCTGTTGATATCATGATGAACAACCcttaaatttaatttaataccta
atttgaattctgaaattttCTGATTCGTCGTACCTGTAATTTTCTTgtgc
tttaaaaaaagttgtaaatatTGTGATTGTAAATAGGAGTTTATTTTAGA
GCAAATAGGGATTTCATACACACAACAGAATAACCTGATGAACTTATCAT
CTGCTGACCCATTTACTAATCTGTTTTCGATTGGAATTTCAATTCGGTTG
CTCCAGGAAATTGAGGATTTCGAaactttatatttgtttatattcaGACA
CGAATATGCTGTTAAGTCCACGGGCTTATTGTAAGGGTTAGTCGAATTAA
CAGGAGTGGTACTCAGAAGAAAATACATGAAATAGGGGGATCTTAGGGTC
ACAATATATATTTAGGGTCACAATATATAGAGTACTTCCCTTCACTTTGG
GTTCTTTTAGTGAATTTTTCGCCGTGATTTTTGAAATGAACGTGCTTTAT
CACTTACTATATCACATTTTccctttaatttatttttagttttttttgct
tAGTCCTTTTTCTGTCACATTCTTGCAACTGTGGAATGTAGGAGAGAGGA
GTTTTTATATAAATAAGCATGGTGTAAATATTTTATACTGTTGGAATGAA
CGCTTATTATTTAAAGAGAATAGAGACTTCTTAAAACAATTATTTAATTA
AACTTAAT
Run BLAST on NCBI

transcript from alignment at scaffold_253:754380..761362-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055531 ID=TCONS_00055531|Name=TCONS_00055531|organism=Clytia hemisphaerica|type=transcript|length=6983bp|location=Sequence derived from alignment at scaffold_253:754380..761362- (Clytia hemisphaerica)
CCTTATTTTCAAAATTAACTTAAAAGTCTGTTTATTTTAGATGACATTTA AAGTAAATTGTTTGATAGATTGTGCATTAGTATATCCCTGATTTGCTGAG AATTTGATAATAATGCACAGATATGAAACGCTCAAAACACTGGGAGATGG AACCTATGGTTCTGTCTTACTGGGAAAAGCCCATGACACTGGAGAGCCAG TAGCAATAAAAAAGTAAGTTATTTTTGTATATCCTTGATTGTTTTAGATT AATGCTAATCCATACATATATGAAGGTTGTTCTTTTGTATTATTACTCGT CACTTTTTAACAACAAAGCGTTTTAAATTAATGGTCTGTATACTATATAT GTAATTTTAGAAAAAAGACATTCCAATTTCATATAGAACAAAGAACTGAC AAAAGTACACTTTGTTATGCTGGTTTGCTTTGAAACTGCAATGCTTTCGC AAGCTCTGCATTTTTTTTCATGGGAATTTGGACCTCCTCAACTGTTACTG TTAACTTAGCTTTAAATGAAATGCTGATTGCTCTAAGACTAAGTTACCTG AACCTGCTTCTAATTAATTTTTACACCACTCTATTTTAGAATGAAAAGGA AATATTACTCATGGGAGGAATGCATCAATTTAAGGGAAGTTAAGGTAATG AAATTTTTTTTATTTAAAATGAGAGCTATGGAATTTCTAGCTTTCTCTTT TTGAAACCTCTCTGTCGAAAAAATTATACTTTCCTGTCTCTTGATAATAA AAATTTTTAGANTCTCTTTTTGAAACCTCTCTGTTGAAAAAATTATACTT TCCTGCCTCTTGATAATAAAAATTTTTAGCATAAGTTTCAATAAAATTTT TAGCATATAAATTTTCATTACAAATTTTAGAGTTTACGAAAGTTGAGTCA CACCAATTTGATCAAGCTGAAAGAAGTCATCAGAGAAAACAACCAATTAT TCTTTGTCTTTGAATATATGAAGGAAAACCTTTACCAACTAATGAAAAAT AGGCAAGTGTTCTGTATTATTTTCCACTGAGACTTGCTAAACAAAAAAAG AATTTGAATATTCTGAGTAAAGTTAAAGATTTACTTCTTCCCTTTGTTGC TTCAAATTTCAATGCTCTGCTCTATGTAAAAAGTCTTGAAATTTCAGGCT AATTTTAGGATTAACTTTGGAGCTTTGATTGCTGCAAGTCCATGGAACAA TGGCCTTTTGTAAGAGCAAAAAGGAATTTCATGATTGACTTACTTCTCGA CCTTCTTATAGGGACAAATTATTTCCTGAAACAACAGTGCGGAATATAAT GTATCAGATTTTACAAGGATTAGCATTCATGCATAAAACAGGTATAAATT TTTTTTCACCTCAAAACAAAACTTCATTTTTATGTATTTTCTGTCTTTAT CATCATTGTTATAAATACTAGCTCAATAATGCAAATGTTTTTCAAATGAT ATCAATTTTAATGTTTAGGTTATTTCCATCGTGACATGAAGCCAGAAAAC CTGCTGTGTAGTGGACCAGAAATTGTTAAAATAGCTGATTTTGGTTTAGT TCGGGAAATCCGTTCAAGACCGCCGTATACTGATTATGTCTCAACAAGAT GGTACAATTTTCCTTTTCTTTCATTGATAAACCAAATTGTTCCAAATTAA GAATAAAAATTATATTGAGTCATTGGGGAAAGAAATAGACCTTTATCATG AATTACGTCAAAAGCAACTGCTTCCTCGCTTTCAAATTATTTCTATGGTA ATTGAGTCCAAGAGGAGTTCATTAAGAAGTTTACTCTATTTATAAAAGTA ACATTCGGAGACTCAAGGGATTTAATCACCTTGGTAATGGTTTTAAATCG AGGCAGTCATTGCACTCAAAATAATTTATGAAAAGGCAAACAAGGAATTA TTTTTGGACCTACCTCTGGGTACCCCAATGGAGGTCCTTTAAATTAACCC ATGTTCGTCTGTCCGCCCGTTCGTTCGTCTGTTACCAGCTTTTCTCAGGA TTGGCTCATTACTTTTTCTGTTTTTTGGCACAATGATGCAAAATGATGAT TCCTAGAAAGTGACTGAGCCCGATTTTTGAAAATAGTTTTTTGCTCAAAG ATGCGTATTAACAATGCCCAAAAAATGGCTGAGTCCGGTGTTTCAATTTT CAATAAAATCTGATAAAATTGATTTTTGAAGCCGGAACCGTTTAAAAATT GCCGAAACAACCTATTTTAGCCGGAAAGACAATATTTATTGAATTTCTCG AGCTGTACTTTATATTTTTTTGTGAAATTTTGCACACTGATGCAAAATGA CAATACCTAAAAAGTGATGGATCACGATTTTCAAAAAAACATTTTTTTTC GGCCAAAAATGCTGGAAATATGCCGGAAAAACGGGTTTTTTGGCATTTTC TCAAGATTTTATCACTCGTTTTTCTGATTTTTAGCTCAAAGATGCATATT AACAATGCCCAAATCATGGTCGAGTCCGATTTTTGAGAAAAATTTTTTAT CGGCCGAAAATGCTGGAAACATGCTGGAAATCGCCGTTTTTCTGTTTTTT GATTGGACTTTTTCCTTATAATTGGTTGTTTTTTCATTCAAAAACATTAT TAATAGCAATGCCCACCATCAAGCATGTTTCAATTTTCAATAAAATTGAT TTTTGAAGCCGAAACTATTTAAATATTTTTTCACTGACCTTATCAATAGA CTTATAGAAGACATTATTATTTAAATTATTTGTTACAGGTATAGAGCTCC CGAAGTTTTGTTACGATCAACCAATTACAACTCTCCTATTGACATTTTTG CTTTGGGTTGTATCATGGCAGAATTGTATACATTGCGTCCTTTATTTCCT GGCTCAAGTGAAGTAGATATGATATTCAAAATTTGTTCAGTTCTTGGTAC TCCAAACAAGGTAAGATTCATGATAGCTGCAATAAACCTTTTCAAAATTA ATAAGCAAATTAACATAGACAGCTTTTATGATAATAAACTAAATGAATAA AATAGCATTCAAAACGACCACGTGGAAACCTAAGATGATATTCTTACTGC AAGAGTGACATCGATAAATACTCAGAATTATCCGTTTTATCAGTTGCAGA GACATTCCTGTATTCCATCTAATTATTATTATTGCACTGTTTTGTTATTA ATGAGTCCATGTTTTGTTCTCTTCTAGAATGACTGGGAAGAGGGTTATCA ATTAGCATCCAAAATGAACTTCAAATTTCCTAAAATGGTATGTATTACTT TTTTGATATCATGAATTATACTGGGAACATGATCAGATAACAGAAAAAAA GTAGAAGACTTTATCCAAAAATGCGGAACTGTGAAAAATCTTATAGAATC TTCCCTGATCTTCGCTATATTTTTCAATGCATATTTTAGGTATCGACTCC ATTGAGGCAACTTATACCGAATGCTAGTCAAGATGGTATTGAGATTTTAT ATGCAATGTTGGCTTGGAATCCACAACAAAGACCTTCATCACAGAAATCG CTAGCGCACAAATTTTTCACAGTCGGACAAAATTTACATCGTTCACATAA ACAGAAAGCAAAACCGTTGAAAGCCGAAACAGGGCTAGGTGAAAGAAATA ACACGAACTTACAAGAGACTGTCAAACCCATCAATTTAAATATGTCTTTA AACAAAAATTTGAAAAAGAACAATATGGATAATAATGCTAGTGGTGGCAA ATTTGACTTTGAACCCAAGAAACCAGAGGGTCCGAAAAAATCTCAAGAGC CAAGGAAACGTTGGGGTTCATCCAATATGAATAACAAACAAAATGCTGCC GCTACTAAAGATTCAGTTGACGAATTCGATTCTATTCTGGATGGTTTGGG AAGTAGTACAAATAGCTTCAATAAAAGGGTAAGTCGTGGATGTTATTTTA ATTTCGTAAGTTCATTTTACTTGGGATCTATATAATCTATTCTTTACGAG TTATTAAATCTGCTAANTTCTCTTCTAGAATGACTGGGAAGAGGGTTATC AATTAGCATCCAAAATGAACTTCAAATTTCCTAAAATGGTATGTATTACT TTTTTGATAACATGGTCAGATAACAGAAAAAAAGTAGAAGACTTTATCCA AAAATGCGGAACTGTGAAAAATCTTATAGAATCTTCCCTGATCTTCGCTA TATTTTTCAATGCATATTTTAGGTATCGACTCCATTGAGGCAACTTATAC CGAATGCTAGTCAAGATGGTATTGAGATTTTATATGCAATGTTGGCTTGG AATCCACAACAAAGACCTTCATCACAGAAATCGCTAGCGCACAAATTTTT CACAGTCGGACAAAATTTACATCGTTCACATAAACAGAAAGCAAAACCGT TGAAAGCCGAAACAGGGCTAGGTGAAAGAAATAACACGAACTTACAAGAG ACTGTCAAACCCATCAATTTAAATATGTCTTTAAACAAAAATTTGAAAAA GAACAATATGGATAATAATGCTAGTGGTGGCAAATTTGACTTTGAACCCA AGAAACCAGAGGGTCCGAAAAAATCTCAAGAGCCAAGGAAACGTTGGGGT TCATCCAATATGAATAACAAACAAAATGCTGCCGCTACTAAAGATTCAGT TGACGAATTCGATTCTATTCTGGATGGTTTGGGAAGTAGTACAAATAGCT TCAATAAAAGGGTAAGTCGTGGATGTTATTTTAATTTCGTAAGTTCATTT TACTTGGGATCTATATAATCTATTCTTTACGAGTTATTAAATCTGCTAAT TTTTAACACATTTCATTAGTTTATTCAATTTCATGGATCTTCTTTATTTA TAGCATCCTATCAAGAAAAGGGATACCATGGAATCAATAAGGTAATTTTG ATTGAAACTTATAAGCTTCTCCTCTTTATAGGTCATGGTTTGTGAAATTA GTCTAACGAAATCTAACTAAGTAGAATAGTCCCATTATTGACATCTTCTT TCGGAAGTGTTGGAGTAATTTCAATTTCACGAATTCACTCACACTCTCTT CACACTTATAGTGATAAAGAGAAAGTTTTGGGTGGATTTCAAGCTTTACC AAGTATTGGCAGTGGAAAGAAACGAACGACACCAGGTAGCGCTAAGGAGC ATTATCTACAAAAATCACGTTATTACCCTGGAGGTCCAAACGCCCCCATT AAACCGAGTATCGAAGGACGAGTCGTGGATGCTGGAAGTGGTCGGAAATT TGTCGAATTCACATCCGGTAATGTTCAACCCAACATGAACTCAAGATACA TGGGAGATATGGGGCAAGGCACTAAACTACCTACCATCAAGAAGAAAGAA AGCTCTGATAGATTAGCTGGTAAGTCCCTCTTTTAGATAATAATGATTTC AGTTTTAAAGTTTTGAAGTTTACAGATACATTTTTAAGAATGGCTAGGGG AAACCTTTGTTTAAACTGAGTTCATTTGAATCAGAGATTTTGTAAACTTT TCTAAACAAACCTTAAATTGCGTCTCATGAAAGCCTTTGATCAATTTTGG TAATTTTTTACCAAAATACAACACCTTTGCATCGTTCGTGGTGGATTGGT TAAAATAATCTCATAATTTAAATATTTCATAGGTGGTGGTGCCATCTGGA AACCTCCTGCATTGTCCAACAACAAACAACGATCTTTAGGTCATATCTCG AAACCATCTATGGCTATTGGAAGAACTAACTGGAGTAATAAGTGAGTAAC TTTTTTCGTCGATTTTTATGTTATTATCGAAGGACTTCTTAAATGAAAAC TTTTGAGGAGCAATTTCTTAACAATGATGAATTTTTAAACTCTTCTTTTT AAAGGTATGGAAAATGAAATTATCAAATTCAACATCTTGGAAGTTTACCT AAAGCTTATAATATTTGGCTTTCTTGAAACGCCAGACGTGATGGAAAGGA AAGATGATTTAGAGCTCACTAAAGTATCATTCGTGTGTCAGGGCGTGACG CCCCTACCATTGGGACGGAATTGCCGAAAGAAGTTATTTCTTTAAGGAGG AGCTATAAACAACGAGTATTATGATGTTCGAGTCAAAGAGATTGTGAAGA CTTTTAAAAAATGAATTATTTTTTTTGAAAACGACAAAACTAAAAGTGAA AGACATTAGTCAACAAAGTTGTGCATAATATGGTGCATGTATTTATTTTT TGTCAAATGGGAATCTCGAGGAAGGATTCTGTTTTAGTTATACGTTGCAT TTAAACCCATGTAACGAGTTTCAGGAATTTTCGTAGAACATCTTAACAAT CTCAGGATAATGTTAGAAAAAGGTTCTCGCTGTTGATATCATGATGAACA ACCCTTAAATTTAATTTAATACCTAATTTGAATTCTGAAATTTTCTGATT CGTCGTACCTGTAATTTTCTTGTGCTTTAAAAAAAGTTGTAAATATTGTG ATTGTAAATAGGAGTTTATTTTAGAGCAAATAGGGATTTCATACACACAA CAGAATAACCTGATGAACTTATCATCTGCTGACCCATTTACTAATCTGTT TTCGATTGGAATTTCAATTCGGTTGCTCCAGGAAATTGAGGATTTCGAAA CTTTATATTTGTTTATATTCAGACACGAATATGCTGTTAAGTCCACGGGC TTATTGTAAGGGTTAGTCGAATTAACAGGAGTGGTACTCAGAAGAAAATA CATGAAATAGGGGGATCTTAGGGTCACAATATATATTTAGGGTCACAATA TATAGAGTACTTCCCTTCACTTTGGGTTCTTTTAGTGAATTTTTCGCCGT GATTTTTGAAATGAACGTGCTTTATCACTTACTATATCACATTTTCCCTT TAATTTATTTTTAGTTTTTTTTGCTTAGTCCTTTTTCTGTCACATTCTTG CAACTGTGGAATGTAGGAGAGAGGAGTTTTTATATAAATAAGCATGGTGT AAATATTTTATACTGTTGGAATGAACGCTTATTATTTAAAGAGAATAGAG ACTTCTTAAAACAATTATTTAATTAAACTTAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034929XLOC_034929Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055531-exon-scaffold_253-1575043694:761150..761362TCONS_00055531-exon-scaffold_253-1575043694:761150..761362Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:760719..760773TCONS_00055531-exon-scaffold_253-1575043694:760719..760773Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:760361..760482TCONS_00055531-exon-scaffold_253-1575043694:760361..760482Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:760022..760101TCONS_00055531-exon-scaffold_253-1575043694:760022..760101Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:759762..759894TCONS_00055531-exon-scaffold_253-1575043694:759762..759894Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:758453..758624TCONS_00055531-exon-scaffold_253-1575043694:758453..758624Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:757325..757384TCONS_00055531-exon-scaffold_253-1575043694:757325..757384Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:756702..757190TCONS_00055531-exon-scaffold_253-1575043694:756702..757190Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:756522..756559TCONS_00055531-exon-scaffold_253-1575043694:756522..756559Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:756044..756351TCONS_00055531-exon-scaffold_253-1575043694:756044..756351Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:755672..755780TCONS_00055531-exon-scaffold_253-1575043694:755672..755780Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1575043694:754380..755558TCONS_00055531-exon-scaffold_253-1575043694:754380..755558Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:761150..761362TCONS_00055531-exon-scaffold_253-1510915933:761150..761362Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:760719..760773TCONS_00055531-exon-scaffold_253-1510915933:760719..760773Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:760361..760482TCONS_00055531-exon-scaffold_253-1510915933:760361..760482Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:760022..760101TCONS_00055531-exon-scaffold_253-1510915933:760022..760101Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:759762..759894TCONS_00055531-exon-scaffold_253-1510915933:759762..759894Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:758453..758624TCONS_00055531-exon-scaffold_253-1510915933:758453..758624Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:757325..757384TCONS_00055531-exon-scaffold_253-1510915933:757325..757384Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:756702..757190TCONS_00055531-exon-scaffold_253-1510915933:756702..757190Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:756522..756559TCONS_00055531-exon-scaffold_253-1510915933:756522..756559Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:756044..756351TCONS_00055531-exon-scaffold_253-1510915933:756044..756351Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:755672..755780TCONS_00055531-exon-scaffold_253-1510915933:755672..755780Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1510915933:754380..755558TCONS_00055531-exon-scaffold_253-1510915933:754380..755558Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:761150..761362TCONS_00055531-exon-scaffold_253-1491911889:761150..761362Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:760719..760773TCONS_00055531-exon-scaffold_253-1491911889:760719..760773Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:760361..760482TCONS_00055531-exon-scaffold_253-1491911889:760361..760482Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:760022..760101TCONS_00055531-exon-scaffold_253-1491911889:760022..760101Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:759762..759894TCONS_00055531-exon-scaffold_253-1491911889:759762..759894Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:758453..758624TCONS_00055531-exon-scaffold_253-1491911889:758453..758624Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:757325..757384TCONS_00055531-exon-scaffold_253-1491911889:757325..757384Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:756702..757190TCONS_00055531-exon-scaffold_253-1491911889:756702..757190Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:756522..756559TCONS_00055531-exon-scaffold_253-1491911889:756522..756559Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:756044..756351TCONS_00055531-exon-scaffold_253-1491911889:756044..756351Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:755672..755780TCONS_00055531-exon-scaffold_253-1491911889:755672..755780Clytia hemisphaericaexon
TCONS_00055531-exon-scaffold_253-1491911889:754380..755558TCONS_00055531-exon-scaffold_253-1491911889:754380..755558Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_253supercontigscaffold_253:754380..761362 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.14899 3.05188 5.34817 5.43249 31.4056 22.988 20.0269 21.4129 14.4208 15.7475 10.4928 11.6722 6.29575 5.3304 3.76307 5.18262 4.21439 5.09913 8.30002 7.55842 5.65251 5.45029 5.05332 5.58299 11.4661 12.2304 10.3612 8.67808 4.35459 4.42934
Blast
BLAST of TCONS_00055531 vs. Swiss-Prot (Human)
Match: MAK (Serine/threonine-protein kinase MAK OS=Homo sapiens GN=MAK PE=1 SV=2)

HSP 1 Score: 478.404 bits (1230), Expect = 5.940e-156
Identity = 250/498 (50.20%), Postives = 331/498 (66.47%), Query Frame = 2
Query:  113 MHRYETLKTLGDGTYGSVLLGKAHDTGEPVAIKKMKRKYYSWEECINLREVKSLRKLSHTNLIKLKEVIRENNQLFFVFEYMKENLYQLMKNRDKLFPETTVRNIMYQILQGLAFMHKTGYFHRDMKPENLLCSGPEIVKIADFGLVREIRSRPPYTDYVSTRWYRAPEVLLRSTNYNSPIDIFALGCIMAELYTLRPLFPGSSEVDMIFKICSVLGTPNKNDWEEGYQLASKMNFKFPKMVSTPLRQLIPNASQDGIEILYAMLAWNPQQRPSSQKSLAHKFFTVGQNL-----HRSHKQ----KAKPLKAETGLGERNNTNLQETVKPIXXXXXXXXXXXXXXXXXXASGGKFDFEPK---------------------KPEGPKKSQEPRKRWGSSNMNNKQNAAATKDSVDEFDSILDG--------LGSSTNSFNKRHPIKKRDTMESISDKEKVLGGFQALPSIGSGK---KRTTPGSAKEHYLQKSRYYPG 1483
            M+RY T++ LGDGTYGSVL+GK++++GE VAIK+MKRK+YSW+EC+NLREVKSL+KL+H N+IKLKEVIREN+ L+F+FEYMKENLYQLMK+R+KLFPE+ +RNIMYQILQGLAF+HK G+FHRDMKPENLLC GPE+VKIADFGL RE+RS+PPYTDYVSTRWYRAPEVLLRS+ Y+SPID++A+G IMAELY LRPLFPG+SEVD IFKIC VLGTP K+DW EGYQLAS MNF+FP+ V   L+ LIPNAS + I+++  ML W+P++RP++ ++L H +F VGQ L     H   KQ    + +PL+++  L E     L + +  +        + +                PK                     KP G    +  R+RWG       Q    + DS +E +    G        +G       K  P +  + + S S+     G  ++LP++ S K   + +T  ++K++YL++SRY PG
Sbjct:    1 MNRYTTMRQLGDGTYGSVLMGKSNESGELVAIKRMKRKFYSWDECMNLREVKSLKKLNHANVIKLKEVIRENDHLYFIFEYMKENLYQLMKDRNKLFPESVIRNIMYQILQGLAFIHKHGFFHRDMKPENLLCMGPELVKIADFGLARELRSQPPYTDYVSTRWYRAPEVLLRSSVYSSPIDVWAVGSIMAELYMLRPLFPGTSEVDEIFKICQVLGTPKKSDWPEGYQLASSMNFRFPQCVPINLKTLIPNASNEAIQLMTEMLNWDPKKRPTASQALKHPYFQVGQVLGPSSNHLESKQSLNKQLQPLESKPSLVEVEPKPLPDIIDQVVGQPQPKTSQQPLQPIQPPQNLSVQQPPKQQSQEKPPQTLFPSIVKNMPTKPNGTLSHKSGRRRWG-------QTIFKSGDSWEELEDYDFGASHSKKPSMGVFKEKRKKDSPFRLPEPVPSGSNHST--GENKSLPAVTSLKSDSELSTAPTSKQYYLKQSRYLPG 489          
The following BLAST results are available for this feature:
BLAST of TCONS_00055531 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
MAK5.940e-15650.20Serine/threonine-protein kinase MAK OS=Homo sapien... [more]
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