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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055478 ID=TCONS_00055478|Name=TCONS_00055478|organism=Clytia hemisphaerica|type=transcript|length=1130bp
tttatggGTTCTGATTCTGTAAATCGTactcatttttgctaaaatagTCG
TGTTGGCATTTTTGCACCAAGTTGGCAGGAATATCCAATTTAAACATTGA
AACCAAGGATAAGACAATGTGAACTAAATagctcgaacacgcacgggaaa
cacttgttcgagttaagggtATTTCAAGTTATGgaataaggtttataagg
cattgttaactgaagggaccaggaAAACTTGTACGAGTTAAGGAGACACT
CAAGTTTTAAAGTTTCGAGTTATGAGAGTCTACTGTATCTATATAAAGAT
TTAATTTACTTCGCTTTTAAGGTGACAGAGACAGAATTTTGGAGATCATG
TTTGAGTTGTTCAACGTCATTAACATGGGTATCAAGCATGAAGCACTTTA
TTACAAATTGACGGACGATACAGAACAAATTGCCGTGTTGGACGACCGAT
GGGGTTCTCGAATGAACAACCTACAGAAAGTGATGAAAGCAATCGATGAT
GAGGTTGTCAAAGGTGCAAACGATCGAATGCAAACagatttcaatgaaaa
tgtcGTTGAATTGAAAGATAAAGACAACAAGAAAATGGCGCAGAATTTGT
ACGATTTCTTCAGTGAGAAATACTACTGGAGGGACTGGGTGGTACTTGTT
TACTCAAAGTCTGTTTCAGGCTTTAGCAACCATGCTTATAATTACTGCCG
TAACAATTGCATTTTCCGAAAGAGGTTGGGTGGCGGTGTGGATAAAACCA
TCTACGTGTTCCATGTGAATAAAGCTTCTGGATCATGGATGACGAAAAGT
AAAGCTAGTAAGATCCTCTCAACTGGACCTTACACCTACAGAGGTAAATG
TTATAAGTATGAATGGTTCTTCTTCTCAAGATATCGGAAAAGCTACTCAT
GTGATAAACCACAGAAGGACTTAGCGAAAACCAGAGATGCAGTGCGAGGT
GAGCTTAAAGTTTGTAGCATTACTAAAGCCATCGTGATGCTTAAGAAAAA
GCATAGTTACGGCATCGTTGGAGATGATAGAATCAAAGTTCATTTGAAGA
AAGGAGATTTCAATGCATTTGCAGTTGGCCCTTATGGATCTTCGAGTGCT
CAAGAATCTGTGGAAGGTTATTCAAGTAAG Run BLAST on NCBI transcript from alignment at scaffold_253:194141..195270- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055478 ID=TCONS_00055478|Name=TCONS_00055478|organism=Clytia hemisphaerica|type=transcript|length=1130bp|location=Sequence derived from alignment at scaffold_253:194141..195270- (Clytia hemisphaerica)
TTTATGGGTTCTGATTCTGTAAATCGTACTCATTTTTGCTAAAATAGTCG
TGTTGGCATTTTTGCACCAAGTTGGCAGGAATATCCAATTTAAACATTGA
AACCAAGGATAAGACAATGTGAACTAAATAGCTCGAACACGCACGGGAAA
CACTTGTTCGAGTTAAGGGTATTTCAAGTTATGGAATAAGGTTTATAAGG
CATTGTTAACTGAAGGGACCAGGAAAACTTGTACGAGTTAAGGAGACACT
CAAGTTTTAAAGTTTCGAGTTATGAGAGTCTACTGTATCTATATAAAGAT
TTAATTTACTTCGCTTTTAAGGTGACAGAGACAGAATTTTGGAGATCATG
TTTGAGTTGTTCAACGTCATTAACATGGGTATCAAGCATGAAGCACTTTA
TTACAAATTGACGGACGATACAGAACAAATTGCCGTGTTGGACGACCGAT
GGGGTTCTCGAATGAACAACCTACAGAAAGTGATGAAAGCAATCGATGAT
GAGGTTGTCAAAGGTGCAAACGATCGAATGCAAACAGATTTCAATGAAAA
TGTCGTTGAATTGAAAGATAAAGACAACAAGAAAATGGCGCAGAATTTGT
ACGATTTCTTCAGTGAGAAATACTACTGGAGGGACTGGGTGGTACTTGTT
TACTCAAAGTCTGTTTCAGGCTTTAGCAACCATGCTTATAATTACTGCCG
TAACAATTGCATTTTCCGAAAGAGGTTGGGTGGCGGTGTGGATAAAACCA
TCTACGTGTTCCATGTGAATAAAGCTTCTGGATCATGGATGACGAAAAGT
AAAGCTAGTAAGATCCTCTCAACTGGACCTTACACCTACAGAGGTAAATG
TTATAAGTATGAATGGTTCTTCTTCTCAAGATATCGGAAAAGCTACTCAT
GTGATAAACCACAGAAGGACTTAGCGAAAACCAGAGATGCAGTGCGAGGT
GAGCTTAAAGTTTGTAGCATTACTAAAGCCATCGTGATGCTTAAGAAAAA
GCATAGTTACGGCATCGTTGGAGATGATAGAATCAAAGTTCATTTGAAGA
AAGGAGATTTCAATGCATTTGCAGTTGGCCCTTATGGATCTTCGAGTGCT
CAAGAATCTGTGGAAGGTTATTCAAGTAAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055478-exon-scaffold_253-1575043694:194141..195270 | TCONS_00055478-exon-scaffold_253-1575043694:194141..195270 | Clytia hemisphaerica | exon |
| TCONS_00055478-exon-scaffold_253-1510915933:194141..195270 | TCONS_00055478-exon-scaffold_253-1510915933:194141..195270 | Clytia hemisphaerica | exon |
| TCONS_00055478-exon-scaffold_253-1491911889:194141..195270 | TCONS_00055478-exon-scaffold_253-1491911889:194141..195270 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:194141..195270 - |
Blast
The following BLAST results are available for this feature:
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