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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055349 ID=TCONS_00055349|Name=TCONS_00055349|organism=Clytia hemisphaerica|type=transcript|length=1071bp
GCTTTTCAAATTAACCAATTGTTCTTGTTCTTGATTTTATAGAATTAATA
ATGATAAAGCGGAATGTGAAAGTGATACAATCAAGCGTCCGATTGGATAA
ACGAGCTGGTTCTTATAATCCTAAGCAAAAAAGTACGTAATCCTAAAGAG
TTTAAAGAAGCAAGAAGAGAGACACTTGGTTCGAAAATCATCTACTTTAC
TCCTGAGAGAAACTAGAGATGGATATACAGCGCCGTGAGAGTAGCAATAT
AACCTGGAAATGGCAAAAGATCACTTCAACGTTGCTTTTGATATGGATGG
TGCTCGCCACTCTGGCTGGTGGATTTTACGTCAACGATGTCAACTCTTAC
GAAGAAGACGAAAGagagagatttaaaaaaaattcaatgtatAATTTGAA
GAGGGAGTTGTTATTCCCAGCGTGGACAAGTCTAACATTGATTTTCAATG
TCCTGTTAGGTTACATTGGTGTCTTAACCAGGAAGAGATCATACATTAGC
ATTAAATTAGCACTTGATATTTTGAATATCGTGTTCAGGGCGGCAATGAT
TTTCCTTATGGCTGTATTTTGTGCAGCATATGGGGAATGTGTAGTGCAGA
GGGGACCAAGTGGTGTTTATAATGCGTGCTGCGAAGATGAGCCTTTCCGC
ATACCGTGCTACACAGTCACGATTGATCGTATCAGGTTAGAGTTTGGTTT
GCTTATAGTGATATTGGTGATGGAAATCTTATCTTTGGTGACACTCTTTG
TGTCTTGTATTCTTTATTGCACCAAATGTAATGAGAATTGTGCTGCAAGA
CATATGGAAAGCAATAGGGTGAGGTATGAAATAGGACAAGAGAATGTTTT
GCTCCAAGCTAatgataccttaagggaagaaattttcgcgagaagaaatt
ttcgcggaagaaattttcgcggaatttaatttcgcgaattggggcgaaac
acaccaaaattgttaaatcgcgaaattaaattccgcgaaattcgattttt
tttcttcttcttttattttgttgtttttgaccaggtgttaccaaaaaata
tggacacaattaatttttaag Run BLAST on NCBI transcript from alignment at scaffold_253:523605..524675+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055349 ID=TCONS_00055349|Name=TCONS_00055349|organism=Clytia hemisphaerica|type=transcript|length=1071bp|location=Sequence derived from alignment at scaffold_253:523605..524675+ (Clytia hemisphaerica)
GCTTTTCAAATTAACCAATTGTTCTTGTTCTTGATTTTATAGAATTAATA
ATGATAAAGCGGAATGTGAAAGTGATACAATCAAGCGTCCGATTGGATAA
ACGAGCTGGTTCTTATAATCCTAAGCAAAAAAGTACGTAATCCTAAAGAG
TTTAAAGAAGCAAGAAGAGAGACACTTGGTTCGAAAATCATCTACTTTAC
TCCTGAGAGAAACTAGAGATGGATATACAGCGCCGTGAGAGTAGCAATAT
AACCTGGAAATGGCAAAAGATCACTTCAACGTTGCTTTTGATATGGATGG
TGCTCGCCACTCTGGCTGGTGGATTTTACGTCAACGATGTCAACTCTTAC
GAAGAAGACGAAAGagagagatttaaaaaaaattcaatgtatAATTTGAA
GAGGGAGTTGTTATTCCCAGCGTGGACAAGTCTAACATTGATTTTCAATG
TCCTGTTAGGTTACATTGGTGTCTTAACCAGGAAGAGATCATACATTAGC
ATTAAATTAGCACTTGATATTTTGAATATCGTGTTCAGGGCGGCAATGAT
TTTCCTTATGGCTGTATTTTGTGCAGCATATGGGGAATGTGTAGTGCAGA
GGGGACCAAGTGGTGTTTATAATGCGTGCTGCGAAGATGAGCCTTTCCGC
ATACCGTGCTACACAGTCACGATTGATCGTATCAGGTTAGAGTTTGGTTT
GCTTATAGTGATATTGGTGATGGAAATCTTATCTTTGGTGACACTCTTTG
TGTCTTGTATTCTTTATTGCACCAAATGTAATGAGAATTGTGCTGCAAGA
CATATGGAAAGCAATAGGGTGAGGTATGAAATAGGACAAGAGAATGTTTT
GCTCCAAGCTAatgataccttaagggaagaaattttcgcgagaagaaatt
ttcgcggaagaaattttcgcggaatttaatttcgcgaattggggcgaaac
acaccaaaattgttaaatcgcgaaattaaattccgcgaaattcgattttt
tttcttcttcttttattttgttgtttttgaccaggtgttaccaaaaaata
tggacacaattaatttttaag
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055349-exon-scaffold_253-1491911889:523605..524675 | TCONS_00055349-exon-scaffold_253-1491911889:523605..524675 | Clytia hemisphaerica | exon |
| TCONS_00055349-exon-scaffold_253-1510915933:523605..524675 | TCONS_00055349-exon-scaffold_253-1510915933:523605..524675 | Clytia hemisphaerica | exon |
| TCONS_00055349-exon-scaffold_253-1575043694:523605..524675 | TCONS_00055349-exon-scaffold_253-1575043694:523605..524675 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:523605..524675 + |
Blast
The following BLAST results are available for this feature:
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