TCONS_00055285 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055285
Unique NameTCONS_00055285
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length122

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055285 ID=TCONS_00055285|Name=TCONS_00055285|organism=Clytia hemisphaerica|type=transcript|length=122bp
CATTTGACTTCCCTAAAGCtgatataacgttaaatgaacgttaagTGAAC
GTCAAGGTAACGTTTGCCAGCTGGGATTCTTCCTTGGTTGGTTAATTCAA
GATGCATAATTTACCATATATT
Run BLAST on NCBI

transcript from alignment at scaffold_251:731423..731544

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055285 ID=TCONS_00055285|Name=TCONS_00055285|organism=Clytia hemisphaerica|type=transcript|length=122bp|location=Sequence derived from alignment at scaffold_251:731423..731544 (Clytia hemisphaerica)
AATATATGGTAAATTATGCATCTTGAATTAACCAACCAAGGAAGAATCCC
AGCTGGCAAACGTTACCTTGACGTTCActtaacgttcatttaacgttata
tcaGCTTTAGGGAAGTCAAATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034828XLOC_034828Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055285-exon-scaffold_251-1491911889:731423..731544TCONS_00055285-exon-scaffold_251-1491911889:731423..731544Clytia hemisphaericaexon
TCONS_00055285-exon-scaffold_251-1510915933:731423..731544TCONS_00055285-exon-scaffold_251-1510915933:731423..731544Clytia hemisphaericaexon
TCONS_00055285-exon-scaffold_251-1575043694:731423..731544TCONS_00055285-exon-scaffold_251-1575043694:731423..731544Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:731423..731544 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055285 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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