TCONS_00055270 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055270
Unique NameTCONS_00055270
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length159

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055270 ID=TCONS_00055270|Name=TCONS_00055270|organism=Clytia hemisphaerica|type=transcript|length=159bp
AAACCACTTGTAAATTCGAACCAGTTCCTTTTTTGTAATTGTTAAGACTG
AAAGACGTAATACCATATTATTCTTAATATACTTTCACGAGTGCAAAAAG
CAGGATACTGCCTTTTAACGCACGACTGTATGTGCTAAGACatgttcatc
taatgtttc
Run BLAST on NCBI

transcript from alignment at scaffold_251:496821..496979

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055270 ID=TCONS_00055270|Name=TCONS_00055270|organism=Clytia hemisphaerica|type=transcript|length=159bp|location=Sequence derived from alignment at scaffold_251:496821..496979 (Clytia hemisphaerica)
gaaacattagatgaacatGTCTTAGCACATACAGTCGTGCGTTAAAAGGC
AGTATCCTGCTTTTTGCACTCGTGAAAGTATATTAAGAATAATATGGTAT
TACGTCTTTCAGTCTTAACAATTACAAAAAAGGAACTGGTTCGAATTTAC
AAGTGGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034813XLOC_034813Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055270-exon-scaffold_251-1491911889:496821..496979TCONS_00055270-exon-scaffold_251-1491911889:496821..496979Clytia hemisphaericaexon
TCONS_00055270-exon-scaffold_251-1510915933:496821..496979TCONS_00055270-exon-scaffold_251-1510915933:496821..496979Clytia hemisphaericaexon
TCONS_00055270-exon-scaffold_251-1575043694:496821..496979TCONS_00055270-exon-scaffold_251-1575043694:496821..496979Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:496821..496979 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055270 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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