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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055185 ID=TCONS_00055185|Name=TCONS_00055185|organism=Clytia hemisphaerica|type=transcript|length=223bp
TTTAGATAACGAAAAATGGTTTTAAAGactaagaaagaaaagaaggcGTT
GGTGGCGGACGCCGTTGATCAACGCCCGAAACGATACTGGGAAGGTGAAG
AGGAAATTGTTCCTTATCTCACCAGCAAAGATTTTCTGAAAGCGTTCAAG
AAACTACGGGTTAGagATACGACATACATTAAGACAAAAGATGTGCAAGa
gtttctcaatattttctttgGTG Run BLAST on NCBI transcript from alignment at scaffold_251:607478..608634+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055185 ID=TCONS_00055185|Name=TCONS_00055185|organism=Clytia hemisphaerica|type=transcript|length=1157bp|location=Sequence derived from alignment at scaffold_251:607478..608634+ (Clytia hemisphaerica)
TTTAGATAACGAAAAATGGTTTTAAAGactaagaaagaaaagaaggcGTT
GGTGGCGGACGCCGTTGATCAACGCCCGAAACGATACTGGGAAGGTGAAG
AGGAAATTGTTCCTTATCTCACCAGCAAAGATTTTCTGAAAGCGTTCAAG
AAACTACGGGTTAGaggtagactagtaaaccacttCGTTGTGGATCTATT
TttctatatgttcactgaatacaaacCACTCTCCcacggcaatttctatt
ttttataagaactctttattataagcattattcccgcgttcctgtgtcca
aggaaagacagacgcttgctagtctagNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNgacgggcaactctggacaatgtaggcccgtcgtcatgcgaaaag
aaccaattgcattgcgcaaaaagtcatgtagcccgcttcgaaaaagtaac
cggttattataataatacacgtttttttataagaacatcaaaattttttg
aagccttgcgatgttcttaactttttgagtttcaagcctaaaaatgttct
taagatgttcttattttcaccattttttcagtatttttttttcattttcc
aaagaaatcgggtgttttagagtccgcaaaagccttacaatgttcttaac
ttgttcttaacaatttggtcatcgaagccttatgttcttatatagtttgt
cttataaaaaaaacgtgtgcaatgcgtgcaatttttctcaattttctcaA
TTTGGGAAGCCTGAAAAACGCACTTTTAAGGGTCACAATGAGCCCCCTCC
GCCTGGTATTTTTACTTAAATGATGAACTGCATAACCTGCTTTCTTGTAG
ATACGACATACATTAAGACAAAAGATGTGCAAGagtttctcaatattttc
tttgGTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055185-exon-scaffold_251-1491911889:607478..607643 | TCONS_00055185-exon-scaffold_251-1491911889:607478..607643 | Clytia hemisphaerica | exon |
| TCONS_00055185-exon-scaffold_251-1510915933:607478..607643 | TCONS_00055185-exon-scaffold_251-1510915933:607478..607643 | Clytia hemisphaerica | exon |
| TCONS_00055185-exon-scaffold_251-1575043694:607478..607643 | TCONS_00055185-exon-scaffold_251-1575043694:607478..607643 | Clytia hemisphaerica | exon |
| TCONS_00055185-exon-scaffold_251-1491911889:608578..608634 | TCONS_00055185-exon-scaffold_251-1491911889:608578..608634 | Clytia hemisphaerica | exon |
| TCONS_00055185-exon-scaffold_251-1510915933:608578..608634 | TCONS_00055185-exon-scaffold_251-1510915933:608578..608634 | Clytia hemisphaerica | exon |
| TCONS_00055185-exon-scaffold_251-1575043694:608578..608634 | TCONS_00055185-exon-scaffold_251-1575043694:608578..608634 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_251 | supercontig | scaffold_251:607478..608634 + |
Blast
The following BLAST results are available for this feature:
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